Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0047900 Salix brachista HOM05D003867 ORTHO05D004593 0.0e+00 1252.3 612 100.0
Potri.010G057400 Populus trichocarpa HOM05D003867 ORTHO05D004593 6.4e-279 963.8 486 96.9
Manes.12G014300 Manihot esculenta HOM05D003867 ORTHO05D004593 6.2e-274 947.2 486 94.9
COL.COLO4_12823 Corchorus olitorius HOM05D003867 ORTHO05D004593 4.5e-272 941.0 486 94.0
Duzib268G1394 Durio zibethinus HOM05D003867 ORTHO05D004593 1.9e-270 935.6 486 93.8
Gohir.A12G147700 Gossypium hirsutum HOM05D003867 ORTHO05D004593 5.5e-270 934.1 486 92.4
arahy.Tifrunner.gnm1.ann1.VZW0IR Arachis hypogaea HOM05D003867 ORTHO05D004593 7.1e-270 933.7 486 93.0
Gorai.001G109800 Gossypium raimondii HOM05D003867 ORTHO05D004593 1.6e-269 932.6 486 93.2
Gorai.008G164400 Gossypium raimondii HOM05D003867 ORTHO05D004593 1.6e-269 932.6 486 93.8
Thecc.02G275800 Theobroma cacao HOM05D003867 ORTHO05D004593 2.1e-269 932.2 486 93.2
Gohir.D12G152000 Gossypium hirsutum HOM05D003867 ORTHO05D004593 4.6e-269 931.0 486 93.4
Gohir.D07G101900 Gossypium hirsutum HOM05D003867 ORTHO05D004593 1.0e-268 929.9 486 93.0
CiPaw.05G113400 Carya illinoinensis HOM05D003867 ORTHO05D004593 1.3e-268 929.5 486 93.0
Duzib251G0884 Durio zibethinus HOM05D003867 ORTHO05D004593 3.0e-268 928.3 486 93.0
CSS0008021 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 1.1e-267 926.4 486 92.4
CSS0021164 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 1.1e-267 926.4 486 92.6
Duzib248G0225 Durio zibethinus HOM05D003867 ORTHO05D004593 1.9e-267 925.6 486 92.8
TWI36G0688 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 5.7e-267 924.1 486 93.0
Lalb_Chr03g0037281 Lupinus albus HOM05D003867 ORTHO05D004593 7.4e-267 923.7 484 91.9
Gohir.A07G097600 Gossypium hirsutum HOM05D003867 ORTHO05D004593 9.6e-267 923.3 486 91.6
Haze_12379 Corylus avellana HOM05D003867 ORTHO05D004593 3.7e-266 921.4 486 91.8
QL03p054504 Quercus lobata HOM05D003867 ORTHO05D004593 3.7e-266 921.4 485 92.8
TWI75G1178 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 6.3e-266 920.6 486 91.2
Cpa.g.sc257.6 Carica papaya HOM05D003867 ORTHO05D004593 1.1e-265 919.8 486 92.0
Medtr1g042300 Medicago truncatula HOM05D003867 ORTHO05D004593 4.1e-265 917.9 484 91.1
TPR.G25178 Trifolium pratense HOM05D003867 ORTHO05D004593 6.9e-265 917.1 484 91.1
CANSAT64G1093 Cannabis sativa HOM05D003867 ORTHO05D004593 9.0e-265 916.8 484 91.7
Ca_12000_v3 Cicer arietinum L. HOM05D003867 ORTHO05D004593 9.0e-265 916.8 484 91.1
Hund25446 Selenicereus undatus HOM05D003867 ORTHO05D004593 9.0e-265 916.8 483 91.9
MELO3C009702.2 Cucumis melo HOM05D003867 ORTHO05D004593 1.2e-264 916.4 486 90.9
CsaV3_3G039600 Cucumis sativus L. HOM05D003867 ORTHO05D004593 2.0e-264 915.6 486 90.9
Lj6g0022289 Lotus japonicus HOM05D003867 ORTHO05D004593 2.0e-264 915.6 484 91.9
MD13G1115400 Malus domestica HOM05D003867 ORTHO05D004593 2.6e-264 915.2 486 91.2
Psat6g040120 Pisum sativum HOM05D003867 ORTHO05D004593 2.6e-264 915.2 484 90.9
Prupe.1G231900 Prunus persica HOM05D003867 ORTHO05D004593 1.0e-263 913.3 486 90.7
Lalb_Chr01g0021001 Lupinus albus HOM05D003867 ORTHO05D004593 1.7e-263 912.5 484 90.7
RcHm_v2.0_Chr4g0430891 Rosa chinensis HOM05D003867 ORTHO05D004593 1.7e-263 912.5 486 90.5
Peaxi162Scf00128g01017 Petunia axillaris HOM05D003867 ORTHO05D004593 1.4e-262 909.4 487 90.1
Eucgr.H04659 Eucalyptus grandis HOM05D003867 ORTHO05D004593 1.9e-262 909.1 488 91.4
PGR119G1061 Punica granatum HOM05D003867 ORTHO05D004593 1.9e-262 909.1 491 90.8
Sed0026140 Sechium edule HOM05D003867 ORTHO05D004593 1.9e-262 909.1 486 90.3
EL10Ac6g13463 Beta vulgaris HOM05D003867 ORTHO05D004593 2.5e-262 908.7 485 91.3
Glyma.10G005500 Glycine max HOM05D003867 ORTHO05D004593 2.5e-262 908.7 484 90.5
Peaxi162Scf00449g00825 Petunia axillaris HOM05D003867 ORTHO05D004593 3.2e-262 908.3 494 88.5
Aa31LG3G18010 Aethionema arabicum HOM05D003867 ORTHO05D004593 4.2e-262 907.9 486 90.3
ClCG02G006860 Citrullus lanatus HOM05D003867 ORTHO05D004593 4.2e-262 907.9 486 90.1
FvH4_4g24110 Fragaria vesca HOM05D003867 ORTHO05D004593 4.2e-262 907.9 486 90.1
Thhalv10013394m.g Eutrema salsugineum HOM05D003867 ORTHO05D004593 7.2e-262 907.1 486 90.3
Sp6g34370 Schrenkiella parvula HOM05D003867 ORTHO05D004593 7.2e-262 907.1 491 89.6
vmacro15114 Vaccinium macrocarpon HOM05D003867 ORTHO05D004593 7.2e-262 907.1 486 90.5
Ah.03g133960 Amaranthus hybridus HOM05D003867 ORTHO05D004593 9.3e-262 906.7 482 91.3
Glyma.02G003300 Glycine max HOM05D003867 ORTHO05D004593 9.3e-262 906.7 484 90.3
BraA10t44869Z Brassica rapa HOM05D003867 ORTHO05D004593 1.6e-261 906.0 487 89.9
Nitab4.5_0000271g0190 Nicotiana tabacum HOM05D003867 ORTHO05D004593 1.6e-261 906.0 487 89.3
BcaB01g05588 Brassica carinata HOM05D003867 ORTHO05D004593 2.1e-261 905.6 486 90.5
A10p28200 Brassica napus HOM05D003867 ORTHO05D004593 2.1e-261 905.6 486 90.1
DCAR_031187 Daucus carota HOM05D003867 ORTHO05D004593 2.1e-261 905.6 485 89.7
Carub.0006s0748 Capsella rubella HOM05D003867 ORTHO05D004593 3.5e-261 904.8 486 89.9
ECA232G3717 Erigeron canadensis HOM05D003867 ORTHO05D004593 3.5e-261 904.8 484 90.1
Hund06074 Selenicereus undatus HOM05D003867 ORTHO05D004593 4.6e-261 904.4 484 90.9
C03p04400 Brassica napus HOM05D003867 ORTHO05D004593 6.1e-261 904.0 486 90.1
BolC9t59588H Brassica oleracea HOM05D003867 ORTHO05D004593 6.1e-261 904.0 487 89.7
Migut.E00031 Erythranthe guttata HOM05D003867 ORTHO05D004593 6.1e-261 904.0 485 89.9
AT5G08530 Arabidopsis thaliana HOM05D003867 ORTHO05D004593 7.9e-261 903.7 486 89.9
MD16G1115300 Malus domestica HOM05D003867 ORTHO05D004593 7.9e-261 903.7 488 90.6
CARHR204460 Cardamine hirsuta HOM05D003867 ORTHO05D004593 1.0e-260 903.3 486 89.9
A03p03890 Brassica napus HOM05D003867 ORTHO05D004593 1.3e-260 902.9 487 89.7
Solyc02g087240.4 Solanum lycopersicum HOM05D003867 ORTHO05D004593 1.3e-260 902.9 485 89.7
Sopen02g031980 Solanum pennellii HOM05D003867 ORTHO05D004593 1.3e-260 902.9 485 89.7
PGSC0003DMG400001292 Solanum tuberosum HOM05D003867 ORTHO05D004593 1.3e-260 902.9 485 89.7
Nn4g22382 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.8e-260 902.5 485 90.3
TAR374G1237 Trochodendron aralioides HOM05D003867 ORTHO05D004593 1.8e-260 902.5 484 90.9
PSO063G4816 Papaver somniferum HOM05D003867 ORTHO05D004593 2.3e-260 902.1 485 90.3
HanXRQChr09g0255191 Helianthus annuus HOM05D003867 ORTHO05D004593 3.0e-260 901.7 479 90.6
PSO782G1516 Papaver somniferum HOM05D003867 ORTHO05D004593 3.0e-260 901.7 485 90.5
MBI11_g06772_MAGBIO Magnolia biondii HOM05D003867 ORTHO05D004593 3.9e-260 901.4 483 90.5
AL6G19230 Arabidopsis lyrata HOM05D003867 ORTHO05D004593 5.1e-260 901.0 486 89.7
BcaB08g37249 Brassica carinata HOM05D003867 ORTHO05D004593 5.1e-260 901.0 486 89.9
BolC3t12971H Brassica oleracea HOM05D003867 ORTHO05D004593 8.7e-260 900.2 484 90.1
Nn3g16522 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.1e-259 899.8 484 89.9
CAN.G206.61 Capsicum annuum HOM05D003867 ORTHO05D004593 2.5e-259 898.7 486 88.9
VMungo0720G1468 Vigna mungo HOM05D003867 ORTHO05D004593 2.5e-259 898.7 493 89.2
Rhsim12G0153900 Rhododendron simsii HOM05D003867 ORTHO05D004593 3.3e-259 898.3 485 89.9
C09p68410 Brassica napus HOM05D003867 ORTHO05D004593 5.7e-259 897.5 488 89.5
DCAR_007011 Daucus carota HOM05D003867 ORTHO05D004593 7.4e-259 897.1 485 88.9
THA.LOC104819362 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 7.4e-259 897.1 486 89.3
Ciclev10033600m.g Citrus clementina HOM05D003867 ORTHO05D004593 1.3e-258 896.3 452 96.0
Aqoxy3G01483 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 1.6e-258 896.0 484 89.9
SGA_v2.0_scaffold63G21760 Striga asiatica HOM05D003867 ORTHO05D004593 1.6e-258 896.0 485 89.3
CDE09G0709 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 2.2e-258 895.6 484 88.8
Oeu020305.1 Olea europaea HOM05D003867 ORTHO05D004593 2.2e-258 895.6 485 89.1
SGA_v2.0_scaffold347G49568 Striga asiatica HOM05D003867 ORTHO05D004593 3.7e-258 894.8 485 89.1
ATR0665G595 Amborella trichopoda HOM05D003867 ORTHO05D004593 1.1e-257 893.3 483 89.4
ATR0564G372 Amborella trichopoda HOM05D003867 ORTHO05D004593 1.4e-257 892.9 483 89.2
Oeu019042.1 Olea europaea HOM05D003867 ORTHO05D004593 1.4e-257 892.9 485 89.1
Phvul.007G274700 Phaseolus vulgaris HOM05D003867 ORTHO05D004593 2.4e-257 892.1 484 89.9
Sc04g0010000 Simmondsia chinensis HOM05D003867 ORTHO05D004593 4.1e-257 891.3 478 91.2
BraA03t09737Z Brassica rapa HOM05D003867 ORTHO05D004593 5.3e-257 891.0 485 89.5
Rhsim12G0103900 Rhododendron simsii HOM05D003867 ORTHO05D004593 6.9e-257 890.6 474 91.4
MSTRG.7988 Avicennia marina HOM05D003867 ORTHO05D004593 2.6e-256 888.6 485 89.5
Zm00001eb329270 Zea mays HOM05D003867 ORTHO05D004593 2.6e-256 888.6 488 89.8
Os07g0645400 Oryza sativa ssp. japonica HOM05D003867 ORTHO05D004593 7.7e-256 887.1 460 93.7
THA.LOC104818400 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 7.7e-256 887.1 487 88.5
Lsat_1_v5_gn_4_184020 Lactuca sativa HOM05D003867 ORTHO05D004593 1.3e-255 886.3 486 87.9
HanXRQChr15g0486841 Helianthus annuus HOM05D003867 ORTHO05D004593 2.2e-255 885.6 478 89.1
Zm00001eb110430 Zea mays HOM05D003867 ORTHO05D004593 1.4e-254 882.9 489 88.8
Cc11_g16710 Coffea canephora HOM05D003867 ORTHO05D004593 1.8e-249 865.9 474 88.8
SMO141G0212 Selaginella moellendorffii HOM05D003867 ORTHO05D004593 2.2e-247 859.0 461 90.2
Pp3c12_4050 Physcomitrium patens HOM05D003867 ORTHO05D004593 2.9e-247 858.6 481 88.1
SEGI_02035 Sequoiadendron giganteum HOM05D003867 ORTHO05D004593 3.8e-247 858.2 484 87.0
Pp3c4_17990 Physcomitrium patens HOM05D003867 ORTHO05D004593 7.2e-246 854.0 445 92.4
AagrBONN_evm.TU.Sc2ySwM_117.2067 Anthoceros agrestis HOM05D003867 ORTHO05D004593 8.8e-244 847.0 476 84.9
HanXRQChr15g0475281 Helianthus annuus HOM05D003867 ORTHO05D004593 4.4e-243 844.7 442 88.5
Mapoly0052s0094 Marchantia polymorpha HOM05D003867 ORTHO05D004593 1.6e-240 836.3 493 83.4
CBR_g4558 Chara braunii HOM05D003867 ORTHO05D004593 2.9e-239 832.0 434 89.2
CiPaw.06G100100 Carya illinoinensis HOM05D003867 ORTHO05D004593 8.5e-239 830.5 408 96.1
arahy.Tifrunner.gnm1.ann1.IM3BGM Arachis hypogaea HOM05D003867 ORTHO05D004593 1.9e-238 829.3 407 96.1
Lsat_1_v5_gn_0_47760 Lactuca sativa HOM05D003867 ORTHO05D004593 9.4e-238 827.0 431 88.4
AUR62024144 Chenopodium quinoa HOM05D003867 ORTHO05D004593 3.6e-237 825.1 406 95.6
AUR62005586 Chenopodium quinoa HOM05D003867 ORTHO05D004593 1.4e-236 823.2 405 95.6
unitig_21.g20878 Utricularia gibba HOM05D003867 ORTHO05D004593 1.7e-234 816.2 407 93.9
MCO16G634 Micromonas commoda HOM05D003867 ORTHO05D004593 1.1e-225 786.9 433 84.5
Dinv37748 Davidia involucrata HOM05D003867 ORTHO05D004593 4.5e-224 781.6 384 96.6
CDE02G4050 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 5.0e-223 778.1 485 79.4
CBR_g30767 Chara braunii HOM05D003867 ORTHO05D004593 1.8e-220 769.6 421 83.4
PRCOL_00003927 Prasinoderma coloniale HOM05D003867 ORTHO05D004593 8.3e-218 760.8 422 82.2
Cre10.g422600 Chlamydomonas reinhardtii HOM05D003867 ORTHO05D004593 4.1e-217 758.4 436 81.4
Dinv39063 Davidia involucrata HOM05D003867 ORTHO05D004593 2.9e-210 735.7 392 89.8
Actinidia08082 Actinidia chinensis HOM05D003867 ORTHO05D004593 4.0e-204 715.3 392 89.0
Sed0024813 Sechium edule HOM05D003867 ORTHO05D004593 8.9e-204 714.1 477 75.9
SGA_v2.0_scaffold1484G53963 Striga asiatica HOM05D003867 ORTHO05D004593 2.3e-191 672.9 367 88.8
Nn7g37842 Nelumbo nucifera HOM05D003867 ORTHO05D004593 2.5e-190 669.5 346 91.9
Haze_26697 Corylus avellana HOM05D003867 ORTHO05D004593 3.3e-182 642.5 395 73.4
FAN17G1814 Fragaria x ananassa HOM05D003867 ORTHO05D004593 8.1e-181 637.9 485 68.7
HPP92_000985 Vanilla planifolia HOM05D003867 ORTHO05D004593 3.4e-179 632.5 315 94.9
FAN12G0392 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.2e-171 607.4 486 66.5
FAN22G0799 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.5e-171 607.1 485 66.4
FAN07G1251 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.9e-169 600.1 485 65.8
unitig_744.g24299 Utricularia gibba HOM05D003867 ORTHO05D004593 4.0e-164 582.4 331 86.4
Nn3g20865 Nelumbo nucifera HOM05D003867 ORTHO05D004593 9.0e-148 528.1 279 89.2
Actinidia20690 Actinidia chinensis HOM05D003867 ORTHO05D004593 2.4e-140 503.4 351 72.6
Haze_26928 Corylus avellana HOM05D003867 ORTHO05D004593 1.3e-125 454.5 276 75.0
TAR629G2520 Trochodendron aralioides HOM05D003867 ORTHO05D004593 1.5e-113 414.5 203 95.6
Actinidia09668 Actinidia chinensis HOM05D003867 ORTHO05D004593 2.9e-98 363.6 222 80.6
Aqoxy3G01811 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 3.3e-97 360.1 180 91.7
TAR629G2231 Trochodendron aralioides HOM05D003867 ORTHO05D004593 2.9e-93 347.1 172 95.9
CSS0023173 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 7.0e-92 342.4 171 94.7
Nitab4.5_0000581g0020 Nicotiana tabacum HOM05D003867 ORTHO05D004593 4.1e-84 316.6 487 41.9
Atru.chr11.2286 Acer truncatum HOM05D003867 ORTHO05D004593 1.4e-76 291.6 146 93.8
Lj6P823T18 Lonicera japonica HOM05D003867 ORTHO05D004593 1.1e-68 265.4 146 87.0
HPP92_000984 Vanilla planifolia HOM05D003867 ORTHO05D004593 8.7e-66 255.8 162 80.9
MD16G1114900 Malus domestica HOM05D003867 ORTHO05D004593 1.8e-63 248.1 127 89.0
unitig_744.g24298 Utricularia gibba HOM05D003867 ORTHO05D004593 3.1e-63 247.3 127 92.1
GSVIVG01020401001 Vitis vinifera HOM05D003867 ORTHO05D004593 2.3e-58 231.1 153 77.8
Aqoxy84s003 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 4.8e-56 223.4 259 45.2
MD16G1114800 Malus domestica HOM05D003867 ORTHO05D004593 1.0e-50 205.7 100 94.0
Nn8g40622 Nelumbo nucifera HOM05D003867 ORTHO05D004593 4.3e-49 200.3 102 91.2
Actinidia09669 Actinidia chinensis HOM05D003867 ORTHO05D004593 5.8e-46 189.9 126 77.8
Potri.008G177801 Populus trichocarpa HOM05D003867 ORTHO05D004593 1.0e-42 179.1 107 83.2
BcaC03g13233 Brassica carinata HOM05D003155 ORTHO05D012487 7.9e-35 152.9 102 75.5
C02p03650 Brassica napus HOM05D003867 ORTHO05D004593 1.0e-34 152.5 77 93.5
BolC2t06324H Brassica oleracea HOM05D003867 ORTHO05D004593 1.0e-34 152.5 77 93.5
FAN03G1235 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.1e-28 132.5 71 88.7
BcaC03g13232 Brassica carinata HOM05D003867 ORTHO05D004593 1.4e-28 132.1 69 92.8
Duzib128G1406 Durio zibethinus HOM05D003867 ORTHO05D004593 2.5e-28 131.3 197 38.1
FAN15G0422 Fragaria x ananassa HOM05D003867 ORTHO05D004593 6.1e-27 126.7 69 85.5
Nn1g01167 Nelumbo nucifera HOM05D003867 ORTHO05D004593 7.9e-27 126.3 65 92.3
Nn1g01168 Nelumbo nucifera HOM05D003867 ORTHO05D004593 7.9e-27 126.3 65 92.3
FAN07G1961 Fragaria x ananassa HOM05D003867 ORTHO05D004593 2.5e-25 121.3 66 86.4
FAN08G0425 Fragaria x ananassa HOM05D003867 ORTHO05D004593 5.7e-25 120.2 66 84.8
Pp3c3_8640 Physcomitrium patens HOM05D003867 ORTHO05D004593 2.9e-21 107.8 83 65.1
Atru.chr11.2285 Acer truncatum HOM05D003867 ORTHO05D004593 4.2e-20 104.0 67 71.6
GSVIVG01013345001 Vitis vinifera HOM05D003867 ORTHO05D004593 1.6e-19 102.1 67 65.7
Pp3c13_10840 Physcomitrium patens HOM05D003867 ORTHO05D004593 5.7e-17 93.6 48 89.6
Hund25436 Selenicereus undatus HOM05D000424 ORTHO05D008586 3.5e-14 84.3 168 33.9
FvH4_1g23805 Fragaria vesca HOM05D000280 ORTHO05D000632 2.5e-12 78.2 71 56.3
FvH4_3g23161 Fragaria vesca HOM05D011771 ORTHO05D014214 7.2e-12 76.6 72 55.6
FvH4_3g31747 Fragaria vesca HOM05D011771 ORTHO05D014214 1.6e-11 75.5 72 55.6
Nitab4.5_0027010g0010 Nicotiana tabacum HOM05D003867 ORTHO05D004593 1.5e-09 68.9 62 71.0
FvH4_7g28392 Fragaria vesca HOM05D003867 ORTHO05D196806 9.7e-09 66.2 61 57.4
Nitab4.5_0002184g0100 Nicotiana tabacum HOM05D003867 ORTHO05D004593 1.8e-07 62.0 62 58.1


User provided reference genes

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