Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0047600 Salix brachista HOM05D007857 ORTHO05D009355 3.2e-176 621.7 327 100.0
Potri.010G057800 Populus trichocarpa HOM05D007857 ORTHO05D009355 1.0e-153 547.0 330 88.5
Potri.008G177300 Populus trichocarpa HOM05D007857 ORTHO05D009355 4.7e-119 431.8 351 69.5
Sabra08G0135300 Salix brachista HOM05D007857 ORTHO05D009355 2.7e-66 256.5 197 68.0
Actinidia20693 Actinidia chinensis HOM05D007857 ORTHO05D009355 7.9e-50 201.8 349 38.7
Dinv10979 Davidia involucrata HOM05D007857 ORTHO05D009355 6.7e-49 198.7 334 39.2
CSS0005757 Camellia sinensis var. sinensis HOM05D007857 ORTHO05D009355 1.8e-46 190.7 332 39.5
Ciclev10033758m.g Citrus clementina HOM05D007857 ORTHO05D009355 2.4e-46 190.3 325 38.5
Hma1.2p1_1239F.1_g269420 Hydrangea macrophylla HOM05D007857 ORTHO05D009355 9.1e-46 188.3 223 48.4
TWI75G0924 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 9.1e-46 188.3 327 39.1
Dinv14814 Davidia involucrata HOM05D007857 ORTHO05D009355 4.2e-43 179.5 262 41.6
Manes.13G017400 Manihot esculenta HOM05D007857 ORTHO05D009355 3.6e-42 176.4 221 48.4
QL03p054319 Quercus lobata HOM05D007857 ORTHO05D009355 4.7e-42 176.0 327 37.9
TAR374G0584 Trochodendron aralioides HOM05D007857 ORTHO05D009355 2.3e-41 173.7 340 36.2
Rhsim12G0103100 Rhododendron simsii HOM05D007857 ORTHO05D009355 3.0e-41 173.3 331 37.8
Thecc.02G276200 Theobroma cacao HOM05D007857 ORTHO05D009355 3.0e-41 173.3 226 46.9
TWI36G0032 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 5.1e-41 172.6 224 44.6
TWI36G1497 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 5.1e-41 172.6 224 44.6
CANSAT01G1499 Cannabis sativa HOM05D007857 ORTHO05D009355 8.2e-39 165.2 225 43.1
CiPaw.06G100500 Carya illinoinensis HOM05D007857 ORTHO05D009355 5.3e-38 162.5 321 38.9
Atru.chr11.2290 Acer truncatum HOM05D007857 ORTHO05D009355 1.3e-36 157.9 326 37.1
ClCG08G017230 Citrullus lanatus HOM05D007857 ORTHO05D009355 1.7e-36 157.5 348 34.5
MD16G1115600 Malus domestica HOM05D007857 ORTHO05D009355 1.1e-35 154.8 177 49.2
COL.COLO4_20347 Corchorus olitorius HOM05D007857 ORTHO05D009355 1.2e-34 151.4 216 42.6
Sc04g0010010 Simmondsia chinensis HOM05D007857 ORTHO05D009355 1.6e-34 151.0 282 35.8
Lj4g0021592 Lotus japonicus HOM05D007857 ORTHO05D009355 2.1e-34 150.6 329 34.3
RcHm_v2.0_Chr4g0430861 Rosa chinensis HOM05D007857 ORTHO05D009355 2.1e-34 150.6 164 48.8
Solyc04g045390.1 Solanum lycopersicum HOM05D007857 ORTHO05D009355 2.7e-34 150.2 236 38.6
MD13G1115600 Malus domestica HOM05D007857 ORTHO05D009355 4.7e-34 149.4 219 42.9
Eucgr.H04657 Eucalyptus grandis HOM05D007857 ORTHO05D009355 3.0e-33 146.7 301 36.5
Gohir.A03G127600 Gossypium hirsutum HOM05D007857 ORTHO05D009355 3.0e-33 146.7 186 45.2
Gohir.D02G151200 Gossypium hirsutum HOM05D007857 ORTHO05D009355 5.2e-33 146.0 178 47.2
Gorai.005G169600 Gossypium raimondii HOM05D007857 ORTHO05D009355 5.2e-33 146.0 186 45.7
Glyma.05G146200 Glycine max HOM05D007857 ORTHO05D009355 1.5e-32 144.4 218 39.9
Aqoxy5G03443 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 5.7e-32 142.5 329 32.5
Cfa009341 Carpinus fangiana HOM05D007857 ORTHO05D009355 1.7e-31 141.0 158 50.6
Prupe.1G231500 Prunus persica HOM05D007857 ORTHO05D009355 2.2e-31 140.6 327 34.3
FvH4_4g24090 Fragaria vesca HOM05D007857 ORTHO05D009355 3.7e-31 139.8 180 45.0
FAN07G0728 Fragaria x ananassa HOM05D007857 ORTHO05D009355 6.3e-31 139.0 176 44.9
FAN12G2990 Fragaria x ananassa HOM05D007857 ORTHO05D009355 1.8e-30 137.5 180 45.0
Haze_12382 Corylus avellana HOM05D007857 ORTHO05D009355 2.4e-30 137.1 158 50.0
Phvul.002G175100 Phaseolus vulgaris HOM05D007857 ORTHO05D009355 2.4e-30 137.1 231 38.5
Lalb_Chr07g0187361 Lupinus albus HOM05D007857 ORTHO05D009355 4.1e-30 136.3 221 34.8
Glyma.19G186500 Glycine max HOM05D007857 ORTHO05D009355 7.0e-30 135.6 222 37.8
Nn4g22377 Nelumbo nucifera HOM05D007857 ORTHO05D009355 1.2e-29 134.8 253 38.3
Medtr8g080270 Medicago truncatula HOM05D007857 ORTHO05D009355 1.6e-29 134.4 220 39.1
Sed0017756 Sechium edule HOM05D007857 ORTHO05D009355 1.6e-29 134.4 324 33.3
Oeu020304.1 Olea europaea HOM05D001334 ORTHO05D001119 2.0e-29 134.0 264 34.1
CsaV3_2G025390 Cucumis sativus L. HOM05D007857 ORTHO05D009355 2.6e-29 133.7 304 33.9
TAR622G0135 Trochodendron aralioides HOM05D007857 ORTHO05D009355 3.5e-29 133.3 303 35.3
MELO3C010736.2 Cucumis melo HOM05D007857 ORTHO05D009355 5.9e-29 132.5 356 33.1
Glyma.03G186400 Glycine max HOM05D007857 ORTHO05D009355 1.1e-27 128.3 223 37.2
arahy.Tifrunner.gnm1.ann1.AFM6H1 Arachis hypogaea HOM05D007857 ORTHO05D009355 4.2e-27 126.3 214 39.7
PSO063G0898 Papaver somniferum HOM05D007857 ORTHO05D009355 4.2e-27 126.3 283 33.6
TPR.G17074 Trifolium pratense HOM05D007857 ORTHO05D009355 7.2e-27 125.6 143 46.9
Ca_18058_v3 Cicer arietinum L. HOM05D007857 ORTHO05D009355 1.2e-26 124.8 327 33.6
PSO782G1056 Papaver somniferum HOM05D007857 ORTHO05D009355 1.2e-26 124.8 236 35.6
Sed0006532 Sechium edule HOM05D007857 ORTHO05D009355 1.6e-26 124.4 274 35.8
arahy.Tifrunner.gnm1.ann1.32T9N9 Arachis hypogaea HOM05D007857 ORTHO05D009355 2.7e-26 123.6 214 39.7
arahy.Tifrunner.gnm1.ann1.ZB6N55 Arachis hypogaea HOM05D007857 ORTHO05D009355 2.7e-26 123.6 214 39.7
SalBow2G3021 Salvia bowleyana HOM05D007857 ORTHO05D009355 3.6e-26 123.2 301 32.6
Psat7g078480 Pisum sativum HOM05D007857 ORTHO05D009355 4.7e-26 122.9 327 31.8
PGSC0003DMG400017971 Solanum tuberosum HOM05D007857 ORTHO05D009355 4.0e-25 119.8 179 40.2
Nitab4.5_0004967g0040 Nicotiana tabacum HOM05D007857 ORTHO05D009355 9.8e-24 115.2 97 51.5
VMungo0251G2942 Vigna mungo HOM05D007857 ORTHO05D009355 4.1e-22 109.8 235 33.6
DCAR_031188 Daucus carota HOM05D007857 ORTHO05D009355 5.4e-22 109.4 328 30.2
Migut.K00709 Erythranthe guttata HOM05D007857 ORTHO05D009355 7.0e-22 109.0 176 38.1
AL2G26210 Arabidopsis lyrata HOM05D010720 ORTHO05D009355 1.2e-21 108.2 158 41.8
Sopen04g010360 Solanum pennellii HOM05D007857 ORTHO05D009355 4.5e-21 106.3 160 37.5
PSO357G0688 Papaver somniferum HOM05D007857 ORTHO05D009355 1.7e-20 104.4 164 39.6
MBI11_g31349_MAGBIO Magnolia biondii HOM05D007857 ORTHO05D009355 2.9e-20 103.6 168 38.1
Nitab4.5_0000146g0080 Nicotiana tabacum HOM05D007857 ORTHO05D009355 3.8e-20 103.2 83 53.0
Aa31sc48G30 Aethionema arabicum HOM05D010720 ORTHO05D009355 9.4e-19 98.6 156 39.1
Cpa.g.sc43.26 Carica papaya HOM05D007857 ORTHO05D009355 6.1e-18 95.9 268 32.8
BcaB05g24293 Brassica carinata HOM05D010720 ORTHO05D009355 8.0e-18 95.5 240 31.2
Cc11_g16750 Coffea canephora HOM05D007857 ORTHO05D009355 8.0e-18 95.5 286 31.1
PGR119G0189 Punica granatum HOM05D007857 ORTHO05D009355 1.0e-17 95.1 338 29.6
A07p34090 Brassica napus HOM05D010720 ORTHO05D009355 1.4e-17 94.7 157 36.9
CARHR060110 Cardamine hirsuta HOM05D010720 ORTHO05D009355 1.4e-17 94.7 244 33.2
BcaB03g15187 Brassica carinata HOM05D010720 ORTHO05D009355 1.8e-17 94.4 157 36.9
BolC2t08453H Brassica oleracea HOM05D010720 ORTHO05D009355 1.8e-17 94.4 283 30.0
BraA07t31035Z Brassica rapa HOM05D010720 ORTHO05D009355 1.8e-17 94.4 157 36.9
AT1G67540 Arabidopsis thaliana HOM05D010720 ORTHO05D009355 2.3e-17 94.0 177 37.3
C06p42700 Brassica napus HOM05D010720 ORTHO05D009355 6.8e-17 92.4 157 36.3
BolC6t39169H Brassica oleracea HOM05D010720 ORTHO05D009355 6.8e-17 92.4 157 36.3
BcaC03g14845 Brassica carinata HOM05D010720 ORTHO05D009355 1.2e-16 91.7 284 30.6
SHI17949 Sapria himalayana HOM05D007857 ORTHO05D009355 2.0e-16 90.9 139 41.7
THA.LOC104807888 Tarenaya hassleriana HOM05D010720 ORTHO05D009355 2.0e-16 90.9 217 30.9
Thhalv10019017m.g Eutrema salsugineum HOM05D010720 ORTHO05D009355 2.6e-16 90.5 241 30.3
BcaNung05070 Brassica carinata HOM05D010720 ORTHO05D009355 5.7e-16 89.4 217 33.2
C02p23110 Brassica napus HOM05D010720 ORTHO05D009355 5.7e-16 89.4 284 30.3
SGA_v2.0_scaffold9G04766 Striga asiatica HOM05D007857 ORTHO05D009355 7.5e-16 89.0 117 45.3
Aqoxy3G01489 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 1.3e-15 88.2 121 41.3
A02p14300 Brassica napus HOM05D010720 ORTHO05D009355 2.8e-15 87.0 284 29.9
BraA02t06491Z Brassica rapa HOM05D010720 ORTHO05D009355 2.8e-15 87.0 284 29.9
Carub.0002s1388 Capsella rubella HOM05D010720 ORTHO05D009355 1.8e-14 84.3 226 30.5
Sp5g22550 Schrenkiella parvula HOM05D010720 ORTHO05D009355 4.2e-11 73.2 230 30.9
Lj6E824T1 Lonicera japonica HOM05D007857 ORTHO05D009355 1.4e-09 68.2 134 34.3
Lsat_1_v5_gn_8_149921 Lactuca sativa HOM05D007857 ORTHO05D009355 2.9e-07 60.5 119 35.3


User provided reference genes

Program Settings