Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0047100 Salix brachista HOM05D008446 ORTHO05D010616 4.0e-142 508.1 253 100.0
Potri.010G058400 Populus trichocarpa HOM05D008446 ORTHO05D010616 1.0e-36 157.9 110 74.5
Sabra08G0134500 Salix brachista HOM05D008446 ORTHO05D010616 5.6e-27 125.6 99 63.6
Potri.008G176700 Populus trichocarpa HOM05D008446 ORTHO05D010616 4.7e-26 122.5 87 71.3
Ciclev10033355m.g Citrus clementina HOM05D008446 ORTHO05D010616 2.7e-21 106.7 85 63.5
Thecc.02G277000 Theobroma cacao HOM05D008446 ORTHO05D010616 2.5e-19 100.1 86 59.3
Duzib248G0886 Durio zibethinus HOM05D008446 ORTHO05D010616 3.6e-18 96.3 87 57.5
Atru.chr11.2297 Acer truncatum HOM05D008446 ORTHO05D010616 6.2e-18 95.5 93 59.1
Hma1.2p1_0275F.1_g110860 Hydrangea macrophylla HOM05D008446 ORTHO05D010616 5.2e-17 92.4 87 57.5
Actinidia30659 Actinidia chinensis HOM05D008446 ORTHO05D010616 1.5e-16 90.9 83 60.2
Cc02_g37700 Coffea canephora HOM05D008446 ORTHO05D010616 3.4e-16 89.7 78 57.7
FAN21G1469 Fragaria x ananassa HOM05D008446 ORTHO05D010616 4.4e-16 89.4 88 55.7
FvH4_3g28341 Fragaria vesca HOM05D008446 ORTHO05D010616 1.7e-15 87.4 85 56.5
Sabra08G0134300 Salix brachista HOM05D008446 ORTHO05D010616 2.9e-15 86.7 75 62.7
Migut.B01727 Erythranthe guttata HOM05D008446 ORTHO05D010616 3.8e-15 86.3 86 54.7
Manes.13G017900 Manihot esculenta HOM05D008446 ORTHO05D010616 4.9e-15 85.9 86 52.3
Hma1.2p1_0316F.1_g122850 Hydrangea macrophylla HOM05D008446 ORTHO05D010616 8.4e-15 85.1 86 52.3
Dinv14820 Davidia involucrata HOM05D008446 ORTHO05D010616 1.9e-14 84.0 80 53.8
Gohir.A03G127200 Gossypium hirsutum HOM05D008446 ORTHO05D010616 2.4e-14 83.6 75 57.3
Gohir.D02G150600 Gossypium hirsutum HOM05D008446 ORTHO05D010616 2.4e-14 83.6 75 58.7
Cfa009335 Carpinus fangiana HOM05D008446 ORTHO05D010616 4.1e-14 82.8 100 48.0
Gorai.005G168900 Gossypium raimondii HOM05D008446 ORTHO05D010616 5.4e-14 82.4 75 58.7
Prupe.4G256400 Prunus persica HOM05D008446 ORTHO05D010616 7.1e-14 82.0 90 51.1
FAN11G2359 Fragaria x ananassa HOM05D008446 ORTHO05D010616 9.2e-14 81.6 83 54.2
Oeu056349.1 Olea europaea HOM05D008446 ORTHO05D010616 9.2e-14 81.6 87 52.9
Aqoxy3G01500 Aquilegia oxysepala HOM05D008446 ORTHO05D010616 2.7e-13 80.1 91 49.5
COL.COLO4_20356 Corchorus olitorius HOM05D008446 ORTHO05D010616 2.7e-13 80.1 86 52.3
FAN16G2376 Fragaria x ananassa HOM05D008446 ORTHO05D010616 2.7e-13 80.1 84 54.8
Gorai.002G192100 Gossypium raimondii HOM05D008446 ORTHO05D010616 2.7e-13 80.1 74 55.4
Gohir.D01G155080 Gossypium hirsutum HOM05D008446 ORTHO05D010616 7.8e-13 78.6 74 52.7
PGSC0003DMG400000024 Solanum tuberosum HOM05D008446 ORTHO05D010616 1.3e-12 77.8 89 46.1
Cfa005827 Carpinus fangiana HOM05D008446 ORTHO05D010616 1.1e-11 74.7 100 43.0
MD03G1170500 Malus domestica HOM05D008446 ORTHO05D010616 1.1e-11 74.7 99 43.4
CiPaw.05G112300 Carya illinoinensis HOM05D008446 ORTHO05D010616 1.9e-11 73.9 79 45.6
Haze_12388 Corylus avellana HOM05D008446 ORTHO05D010616 9.6e-11 71.6 115 38.3
HanXRQChr08g0207651 Helianthus annuus HOM05D008446 ORTHO05D010616 1.6e-10 70.9 106 36.8
CAN.G78.51 Capsicum annuum HOM05D008446 ORTHO05D010616 2.1e-10 70.5 89 43.8
Oeu053291.1 Olea europaea HOM05D008446 ORTHO05D010616 2.8e-10 70.1 87 46.0
TAR376G1198 Trochodendron aralioides HOM05D008446 ORTHO05D010616 2.8e-10 70.1 86 47.7
Nitab4.5_0009210g0010 Nicotiana tabacum HOM05D008446 ORTHO05D010616 4.7e-10 69.3 90 46.7
Nitab4.5_0002160g0020 Nicotiana tabacum HOM05D008446 ORTHO05D010616 6.2e-10 68.9 89 42.7
CiPaw.06G101000 Carya illinoinensis HOM05D008446 ORTHO05D010616 1.8e-09 67.4 87 42.5
ATR0605G179 Amborella trichopoda HOM05D008446 ORTHO05D010616 3.1e-09 66.6 83 42.2
DCAR_007008 Daucus carota HOM05D004390 ORTHO05D004950 3.1e-09 66.6 73 42.5
Nn6g31552 Nelumbo nucifera HOM05D008446 ORTHO05D010616 3.1e-09 66.6 94 44.7
Oeu014670.1 Olea europaea HOM05D008446 ORTHO05D010616 4.0e-09 66.2 90 43.3
SGA_v2.0_scaffold95G28851 Striga asiatica HOM05D008446 ORTHO05D010616 1.5e-08 64.3 94 39.4
MBI01_g31983_MAGBIO Magnolia biondii HOM05D008446 ORTHO05D010616 2.6e-08 63.5 87 47.1
Rhsim12G0028100 Rhododendron simsii HOM05D008446 ORTHO05D010616 2.6e-08 63.5 79 49.4
HanXRQChr12g0372331 Helianthus annuus HOM05D008446 ORTHO05D010616 3.4e-08 63.2 84 39.3
Oeu004522.1 Olea europaea HOM05D008446 ORTHO05D010616 1.7e-07 60.8 90 41.1
CDE07G0801 Ceratophyllum demersum HOM05D008006 ORTHO05D010181 8.4e-07 58.5 59 57.6


User provided reference genes

Program Settings