Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0045600 Salix brachista HOM05D001171 ORTHO05D006126 1.3e-75 286.2 135 100.0
Potri.010G060500 Populus trichocarpa HOM05D001171 ORTHO05D006126 3.6e-49 198.4 105 87.6
Potri.008G175400 Populus trichocarpa HOM05D001171 ORTHO05D006126 1.7e-46 189.5 105 84.8
Sabra08G0133800 Salix brachista HOM05D001171 ORTHO05D006126 1.4e-45 186.4 105 82.9
TWI36G0373 Tripterygium wilfordii HOM05D001171 ORTHO05D006126 1.7e-43 179.5 108 76.9
CiPaw.06G101600 Carya illinoinensis HOM05D001171 ORTHO05D006126 4.3e-42 174.9 108 75.0
Ciclev10030679m.g Citrus clementina HOM05D001171 ORTHO05D006126 4.7e-41 171.4 108 72.2
Cfa009328 Carpinus fangiana HOM05D001171 ORTHO05D006126 6.2e-41 171.0 108 73.1
Haze_12399 Corylus avellana HOM05D001171 ORTHO05D006126 6.2e-41 171.0 108 73.1
Prupe.1G227300 Prunus persica HOM05D001171 ORTHO05D006126 5.2e-40 167.9 108 70.4
CANSAT01G1884 Cannabis sativa HOM05D001171 ORTHO05D006126 6.8e-40 167.5 108 66.7
Duzib268G1390 Durio zibethinus HOM05D001171 ORTHO05D006126 6.8e-40 167.5 105 70.5
COL.COLO4_20384 Corchorus olitorius HOM05D001171 ORTHO05D006126 8.9e-40 167.2 105 72.4
CiPaw.05G111400 Carya illinoinensis HOM05D001171 ORTHO05D006126 1.2e-39 166.8 108 70.4
Cpa.g.sc351.6 Carica papaya HOM05D001171 ORTHO05D006126 1.5e-39 166.4 108 69.4
FAN17G1139 Fragaria x ananassa HOM05D001171 ORTHO05D006126 2.0e-39 166.0 108 69.4
Manes.12G012600 Manihot esculenta HOM05D001171 ORTHO05D006126 2.6e-39 165.6 108 67.6
RcHm_v2.0_Chr4g0430551 Rosa chinensis HOM05D001171 ORTHO05D006126 2.6e-39 165.6 108 69.4
TAR622G0378 Trochodendron aralioides HOM05D001171 ORTHO05D006126 2.6e-39 165.6 105 70.5
FAN07G0777 Fragaria x ananassa HOM05D001171 ORTHO05D006126 3.4e-39 165.2 108 69.4
Atru.chr11.2309 Acer truncatum HOM05D001171 ORTHO05D006126 4.4e-39 164.9 108 67.6
PGR102G0186 Punica granatum HOM05D001171 ORTHO05D006126 7.6e-39 164.1 108 67.6
MD13G1117700 Malus domestica HOM05D001171 ORTHO05D006126 1.3e-38 163.3 108 67.6
Dinv10966 Davidia involucrata HOM05D001171 ORTHO05D006126 1.7e-38 162.9 105 71.4
FAN12G3364 Fragaria x ananassa HOM05D001171 ORTHO05D006126 1.7e-38 162.9 108 67.6
FvH4_4g23910 Fragaria vesca HOM05D001171 ORTHO05D006126 2.2e-38 162.5 105 69.5
QL03p053673 Quercus lobata HOM05D001171 ORTHO05D006126 2.2e-38 162.5 107 68.2
arahy.Tifrunner.gnm1.ann1.8PLQ7K Arachis hypogaea HOM05D001171 ORTHO05D006126 2.9e-38 162.2 105 70.5
Thecc.02G210400 Theobroma cacao HOM05D001171 ORTHO05D006126 2.9e-38 162.2 108 68.5
Actinidia20704 Actinidia chinensis HOM05D001171 ORTHO05D006126 3.8e-38 161.8 108 67.6
arahy.Tifrunner.gnm1.ann1.2F0YN9 Arachis hypogaea HOM05D001171 ORTHO05D006126 3.8e-38 161.8 105 70.5
FAN22G1166 Fragaria x ananassa HOM05D001171 ORTHO05D006126 3.8e-38 161.8 108 67.6
Hma1.2p1_0065F.1_g035610 Hydrangea macrophylla HOM05D001171 ORTHO05D006126 4.9e-38 161.4 114 66.7
Actinidia09656 Actinidia chinensis HOM05D001171 ORTHO05D006126 6.4e-38 161.0 108 66.7
Duzib248G1370 Durio zibethinus HOM05D001171 ORTHO05D006126 6.4e-38 161.0 108 67.6
GSVIVG01010452001 Vitis vinifera HOM05D001171 ORTHO05D006126 6.4e-38 161.0 105 69.5
Dinv14829 Davidia involucrata HOM05D001171 ORTHO05D006126 8.4e-38 160.6 105 68.6
Glyma.05G146600 Glycine max HOM05D001171 ORTHO05D006126 1.9e-37 159.5 105 70.5
MD16G1117900 Malus domestica HOM05D001171 ORTHO05D006126 2.4e-37 159.1 123 60.2
Sed0016407 Sechium edule HOM05D001171 ORTHO05D006126 2.4e-37 159.1 108 63.9
CSS0006395 Camellia sinensis var. sinensis HOM05D001171 ORTHO05D006126 4.1e-37 158.3 108 64.8
MELO3C011454.2 Cucumis melo HOM05D001171 ORTHO05D006126 4.1e-37 158.3 108 65.7
Ca_18053_v3 Cicer arietinum L. HOM05D001171 ORTHO05D006126 7.1e-37 157.5 105 67.6
Lj6A825T69 Lonicera japonica HOM05D001171 ORTHO05D006126 7.1e-37 157.5 102 68.6
CsaV3_6G032260 Cucumis sativus L. HOM05D001171 ORTHO05D006126 9.2e-37 157.1 108 63.9
CARHR059950 Cardamine hirsuta HOM05D001171 ORTHO05D006126 1.6e-36 156.4 108 64.8
PSO782G3690 Papaver somniferum HOM05D001171 ORTHO05D006126 2.1e-36 156.0 108 63.9
Lalb_Chr12g0206251 Lupinus albus HOM05D001171 ORTHO05D006126 2.7e-36 155.6 105 67.6
Rhsim12G0099100 Rhododendron simsii HOM05D001171 ORTHO05D006126 2.7e-36 155.6 108 64.8
Lj4g0002448 Lotus japonicus HOM05D001171 ORTHO05D006126 3.5e-36 155.2 105 66.7
A07p32560 Brassica napus HOM05D001171 ORTHO05D006126 4.6e-36 154.8 108 62.0
C06p38700 Brassica napus HOM05D001171 ORTHO05D006126 4.6e-36 154.8 108 62.0
BraA07t30880Z Brassica rapa HOM05D001171 ORTHO05D006126 4.6e-36 154.8 108 62.0
Peaxi162Scf00518g00435 Petunia axillaris HOM05D001171 ORTHO05D006126 4.6e-36 154.8 105 65.7
Hund06085 Selenicereus undatus HOM05D001171 ORTHO05D006126 4.6e-36 154.8 108 64.8
Aqoxy5G03404 Aquilegia oxysepala HOM05D001171 ORTHO05D006126 6.0e-36 154.5 108 64.8
TPR.G17090 Trifolium pratense HOM05D001171 ORTHO05D006126 6.0e-36 154.5 105 66.7
Lalb_Chr13g0294301 Lupinus albus HOM05D001171 ORTHO05D006126 7.8e-36 154.1 105 65.7
Phvul.002G174700 Phaseolus vulgaris HOM05D001171 ORTHO05D006126 7.8e-36 154.1 105 65.7
BcaB03g15201 Brassica carinata HOM05D001171 ORTHO05D006126 1.0e-35 153.7 108 61.1
AT1G67420 Arabidopsis thaliana HOM05D001171 ORTHO05D006126 1.3e-35 153.3 106 64.2
PSO063G5985 Papaver somniferum HOM05D001171 ORTHO05D006126 1.3e-35 153.3 108 63.0
THA.LOC104825512 Tarenaya hassleriana HOM05D001171 ORTHO05D006126 1.3e-35 153.3 110 62.7
Aa31sc475G10 Aethionema arabicum HOM05D001171 ORTHO05D006126 1.7e-35 152.9 108 61.1
Cc00_g13520 Coffea canephora HOM05D001171 ORTHO05D006126 1.7e-35 152.9 105 65.7
Nn3g16495 Nelumbo nucifera HOM05D001171 ORTHO05D006126 2.3e-35 152.5 105 66.7
Carub.0002s1375 Capsella rubella HOM05D001171 ORTHO05D006126 3.0e-35 152.1 108 63.0
Eucgr.B03486 Eucalyptus grandis HOM05D001171 ORTHO05D006126 3.0e-35 152.1 105 67.6
BolC6t38960H Brassica oleracea HOM05D001171 ORTHO05D006126 3.9e-35 151.8 103 64.1
SEGI_39555 Sequoiadendron giganteum HOM05D001171 ORTHO05D006126 6.6e-35 151.0 105 62.9
BraA07t31024Z Brassica rapa HOM05D001171 ORTHO05D006126 8.6e-35 150.6 108 59.3
MBI11_g07459_MAGBIO Magnolia biondii HOM05D001171 ORTHO05D006126 8.6e-35 150.6 108 62.0
A07p33970 Brassica napus HOM05D001171 ORTHO05D006126 1.1e-34 150.2 108 59.3
BolC6t39150H Brassica oleracea HOM05D001171 ORTHO05D006126 1.1e-34 150.2 108 59.3
Sp5g22350 Schrenkiella parvula HOM05D001171 ORTHO05D006126 1.1e-34 150.2 108 60.2
EL10Ac6g13486 Beta vulgaris HOM05D001171 ORTHO05D006126 1.5e-34 149.8 106 60.4
BcaB03g15356 Brassica carinata HOM05D001171 ORTHO05D006126 1.9e-34 149.4 108 60.2
Solyc12g035500.3 Solanum lycopersicum HOM05D001171 ORTHO05D006126 2.5e-34 149.1 105 61.9
GSVIVG01029097001 Vitis vinifera HOM05D001171 ORTHO05D006126 2.5e-34 149.1 105 65.7
BcaC08g46164 Brassica carinata HOM05D001171 ORTHO05D006126 3.3e-34 148.7 108 58.3
C06p42880 Brassica napus HOM05D001171 ORTHO05D006126 3.3e-34 148.7 108 58.3
Migut.E00023 Erythranthe guttata HOM05D001171 ORTHO05D006126 3.3e-34 148.7 105 63.8
Thhalv10018109m.g Eutrema salsugineum HOM05D001171 ORTHO05D006126 3.3e-34 148.7 108 62.0
Zm00001eb305460 Zea mays HOM05D001171 ORTHO05D006126 3.3e-34 148.7 108 57.4
HPP92_007002 Vanilla planifolia HOM05D001171 ORTHO05D006126 5.6e-34 147.9 105 61.9
MSTRG.2457 Avicennia marina HOM05D001171 ORTHO05D006126 9.6e-34 147.1 108 61.1
Gohir.D05G311700 Gossypium hirsutum HOM05D001171 ORTHO05D006126 9.6e-34 147.1 108 59.3
Gorai.009G332800 Gossypium raimondii HOM05D001171 ORTHO05D006126 9.6e-34 147.1 108 59.3
Sopen12g015420 Solanum pennellii HOM05D001171 ORTHO05D006126 9.6e-34 147.1 105 61.0
SGA_v2.0_scaffold87G27147 Striga asiatica HOM05D001171 ORTHO05D006126 9.6e-34 147.1 102 64.7
AUR62005606 Chenopodium quinoa HOM05D001171 ORTHO05D006126 1.6e-33 146.4 105 61.0
AUR62024123 Chenopodium quinoa HOM05D001171 ORTHO05D006126 2.1e-33 146.0 108 59.3
ClCG08G010100 Citrullus lanatus HOM05D001171 ORTHO05D006126 2.8e-33 145.6 98 64.3
Gohir.A05G310900 Gossypium hirsutum HOM05D001171 ORTHO05D006126 3.6e-33 145.2 108 58.3
Os07g0295800 Oryza sativa ssp. japonica HOM05D001171 ORTHO05D006126 3.6e-33 145.2 108 55.6
Medtr8g080470 Medicago truncatula HOM05D001171 ORTHO05D006126 4.7e-33 144.8 105 61.0
HanXRQChr08g0207751 Helianthus annuus HOM05D001171 ORTHO05D006126 1.1e-32 143.7 105 59.0
CDE05G2832 Ceratophyllum demersum HOM05D001171 ORTHO05D006126 4.0e-32 141.7 109 60.6
CAN.G828.1 Capsicum annuum HOM05D001171 ORTHO05D006126 6.9e-32 141.0 105 61.0
ATR0561G160 Amborella trichopoda HOM05D001171 ORTHO05D006126 1.5e-31 139.8 108 58.3
VMungo0251G3321 Vigna mungo HOM05D001171 ORTHO05D006126 3.4e-31 138.7 92 67.4
unitig_744.g24422 Utricularia gibba HOM05D001171 ORTHO05D006126 5.8e-31 137.9 105 57.1
Lsat_1_v5_gn_8_149401 Lactuca sativa HOM05D001171 ORTHO05D006126 6.4e-30 134.4 97 58.8
ECA233G4311 Erigeron canadensis HOM05D001171 ORTHO05D006126 1.9e-29 132.9 107 54.2
SalBow8G5464 Salvia bowleyana HOM05D001171 ORTHO05D006126 3.2e-29 132.1 99 57.6
Ah.03g136230 Amaranthus hybridus HOM05D001171 ORTHO05D006126 2.7e-28 129.0 100 58.0
SHI17955 Sapria himalayana HOM05D001171 ORTHO05D006126 2.7e-28 129.0 93 61.3
Mapoly0009s0031 Marchantia polymorpha HOM05D001171 ORTHO05D006126 6.6e-27 124.4 106 55.7
Nitab4.5_0001098g0040 Nicotiana tabacum HOM05D001171 ORTHO05D006126 1.5e-26 123.2 88 65.9
Peaxi162Scf00134g00811 Petunia axillaris HOM05D001171 ORTHO05D006126 9.6e-26 120.6 96 58.3
Peaxi162Scf00548g00418 Petunia axillaris HOM05D001171 ORTHO05D006126 6.2e-25 117.9 103 56.3
Peaxi162Scf00768g00005 Petunia axillaris HOM05D001171 ORTHO05D006126 6.2e-25 117.9 103 56.3
SMO116G0357 Selaginella moellendorffii HOM05D001171 ORTHO05D006126 1.3e-22 110.2 111 45.0
Pp3c11_25820 Physcomitrium patens HOM05D001171 ORTHO05D006126 4.2e-21 105.1 105 47.6
CSS0011449 Camellia sinensis var. sinensis HOM05D001171 ORTHO05D006126 3.0e-19 99.0 61 68.9
Oeu058919.3 Olea europaea HOM05D001171 ORTHO05D006126 1.9e-18 96.3 61 67.2
Lj3C1067G5 Lonicera japonica HOM05D001171 ORTHO05D006126 5.8e-15 84.7 103 45.6
Peaxi162Scf00086g01218 Petunia axillaris HOM05D001171 ORTHO05D006126 9.0e-08 60.8 82 42.7
vmacro16110 Vaccinium macrocarpon HOM05D001171 ORTHO05D006126 1.2e-07 60.5 97 39.2
Glyma.08G103300 Glycine max HOM05D001171 ORTHO05D006126 4.5e-07 58.5 28 85.7
AagrBONN_evm.TU.Sc2ySwM_344.2095 Anthoceros agrestis HOM05D001171 ORTHO05D006126 3.8e-06 55.5 39 61.5


User provided reference genes

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