Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0045400 Salix brachista HOM05D000976 ORTHO05D038508 1.9e-49 198.7 92 100.0
Potri.010G060700 Populus trichocarpa HOM05D000976 ORTHO05D000847 1.2e-16 89.7 45 86.7
Ciclev10032373m.g Citrus clementina HOM05D000976 ORTHO05D000847 1.4e-15 86.3 42 85.7
Sabra08G0133700 Salix brachista HOM05D000976 ORTHO05D000847 3.0e-15 85.1 49 75.5
Os11g0483900 Oryza sativa ssp. japonica HOM05D000976 ORTHO05D000847 8.8e-15 83.6 47 72.3
Potri.008G175301 Populus trichocarpa HOM05D000976 ORTHO05D000847 8.8e-15 83.6 37 91.9
TWI75G1418 Tripterygium wilfordii HOM05D000976 ORTHO05D000847 1.5e-14 82.8 45 77.8
GSVIVG01010471001 Vitis vinifera HOM05D000976 ORTHO05D000847 1.5e-14 82.8 71 52.1
Thecc.02G209900 Theobroma cacao HOM05D000976 ORTHO05D000847 4.4e-14 81.3 45 77.8
TAR622G0108 Trochodendron aralioides HOM05D000976 ORTHO05D000847 4.4e-14 81.3 45 77.8
Duzib251G0423 Durio zibethinus HOM05D000976 ORTHO05D000847 9.8e-14 80.1 45 77.8
Manes.12G012400 Manihot esculenta HOM05D000976 ORTHO05D000847 9.8e-14 80.1 42 81.0
EL10Ac6g13490 Beta vulgaris HOM05D000976 ORTHO05D000847 1.3e-13 79.7 42 78.6
CiPaw.05G111000 Carya illinoinensis HOM05D000976 ORTHO05D000847 1.3e-13 79.7 45 75.6
CANSAT01G2890 Cannabis sativa HOM05D000976 ORTHO05D000847 1.7e-13 79.3 41 80.5
Dinv14833 Davidia involucrata HOM05D000976 ORTHO05D000847 1.7e-13 79.3 42 76.2
TWI36G1522 Tripterygium wilfordii HOM05D000976 ORTHO05D000847 1.7e-13 79.3 37 86.5
Duzib248G1209 Durio zibethinus HOM05D000976 ORTHO05D000847 3.7e-13 78.2 45 77.8
ClCG11G013710 Citrullus lanatus HOM05D000976 ORTHO05D000847 4.9e-13 77.8 45 71.1
PSO017G7373 Papaver somniferum HOM05D000976 ORTHO05D000847 4.9e-13 77.8 39 84.6
PSO478G3255 Papaver somniferum HOM05D000976 ORTHO05D000847 4.9e-13 77.8 39 84.6
Aqoxy3G01545 Aquilegia oxysepala HOM05D000976 ORTHO05D038508 1.1e-12 76.6 39 82.1
RcHm_v2.0_Chr4g0430431 Rosa chinensis HOM05D000976 ORTHO05D000847 1.1e-12 76.6 42 71.4
MELO3C011870.2 Cucumis melo HOM05D000976 ORTHO05D000847 1.4e-12 76.3 42 71.4
Cc00_g13500 Coffea canephora HOM05D000976 ORTHO05D000847 1.8e-12 75.9 45 71.1
Dinv10965 Davidia involucrata HOM05D000976 ORTHO05D005109 1.8e-12 75.9 47 70.2
Eucgr.B03488 Eucalyptus grandis HOM05D000976 ORTHO05D000847 1.8e-12 75.9 42 73.8
MD13G1118100 Malus domestica HOM05D000976 ORTHO05D000847 2.4e-12 75.5 38 78.9
Atru.chr11.2311 Acer truncatum HOM05D000976 ORTHO05D000847 3.1e-12 75.1 53 69.8
CSS0006244 Camellia sinensis var. sinensis HOM05D000976 ORTHO05D000847 3.1e-12 75.1 47 70.2
CsaV3_5G030320 Cucumis sativus L. HOM05D000976 ORTHO05D000847 4.1e-12 74.7 42 71.4
Phvul.001G261100 Phaseolus vulgaris HOM05D000976 ORTHO05D000847 5.4e-12 74.3 45 68.9
Hund25461 Selenicereus undatus HOM05D000976 ORTHO05D000847 5.4e-12 74.3 48 62.5
THA.LOC104807881 Tarenaya hassleriana HOM05D000976 ORTHO05D000847 1.2e-11 73.2 48 68.8
PGR102G3209 Punica granatum HOM05D000976 ORTHO05D000847 2.0e-11 72.4 42 71.4
VMungo1383G2492 Vigna mungo HOM05D000976 ORTHO05D000847 2.0e-11 72.4 42 71.4
Gorai.005G168500 Gossypium raimondii HOM05D000976 ORTHO05D000847 2.7e-11 72.0 45 66.7
Zm00001eb169680 Zea mays HOM05D000976 ORTHO05D000847 3.5e-11 71.6 42 66.7
FAN07G1201 Fragaria x ananassa HOM05D000976 ORTHO05D000847 4.5e-11 71.2 39 71.8
Glyma.18G007400 Glycine max HOM05D000976 ORTHO05D000847 4.5e-11 71.2 46 69.6
Lj3A1067G58 Lonicera japonica HOM05D000976 ORTHO05D000847 7.8e-11 70.5 40 70.0
DCAR_031199 Daucus carota HOM05D000976 ORTHO05D000847 1.0e-10 70.1 40 67.5
FvH4_4g23860 Fragaria vesca HOM05D000976 ORTHO05D000847 1.3e-10 69.7 38 68.4
QL03p053535 Quercus lobata HOM05D000976 ORTHO05D000847 1.3e-10 69.7 41 73.2
Hma1.2p1_0065F.1_g035590 Hydrangea macrophylla HOM05D000976 ORTHO05D000847 1.7e-10 69.3 42 66.7
Cpa.g.sc43.46 Carica papaya HOM05D000976 ORTHO05D000847 2.3e-10 68.9 40 67.5
Nn3g16479 Nelumbo nucifera HOM05D000976 ORTHO05D000847 2.3e-10 68.9 45 64.4
HPP92_023199 Vanilla planifolia HOM05D000976 ORTHO05D000847 3.8e-10 68.2 42 64.3
MSTRG.2458 Avicennia marina HOM05D000976 ORTHO05D000847 6.6e-10 67.4 45 62.2
Sc04g0010090 Simmondsia chinensis HOM05D000976 ORTHO05D000847 8.6e-10 67.0 42 69.0
Rhsim12G0026400 Rhododendron simsii HOM05D000976 ORTHO05D000847 1.1e-09 66.6 43 67.4
HPP92_024539 Vanilla planifolia HOM05D000976 ORTHO05D000847 1.1e-09 66.6 48 62.5
AUR62005611 Chenopodium quinoa HOM05D000976 ORTHO05D000847 1.5e-09 66.2 42 71.4
Medtr3g085460 Medicago truncatula HOM05D000976 ORTHO05D000847 1.5e-09 66.2 39 74.4
Glyma.11G249800 Glycine max HOM05D000976 ORTHO05D000847 1.9e-09 65.9 57 59.6
Psat5g095360 Pisum sativum HOM05D000976 ORTHO05D000847 4.3e-09 64.7 45 62.2
TPR.G28277 Trifolium pratense HOM05D000976 ORTHO05D000847 4.3e-09 64.7 46 65.2
vmacro01064 Vaccinium macrocarpon HOM05D000976 ORTHO05D000847 5.6e-09 64.3 43 65.1
ECA233G2244 Erigeron canadensis HOM05D000976 ORTHO05D000847 2.1e-08 62.4 42 61.9
Migut.E00020 Erythranthe guttata HOM05D000976 ORTHO05D000847 2.8e-08 62.0 39 66.7
Ca_16466_v3 Cicer arietinum L. HOM05D000976 ORTHO05D000847 3.6e-08 61.6 42 61.9
Sp5g22330 Schrenkiella parvula HOM05D000976 ORTHO05D000847 6.1e-08 60.8 55 58.2
Sed0015559 Sechium edule HOM05D000976 ORTHO05D000847 8.0e-08 60.5 48 60.4
Carub.0002s1373 Capsella rubella HOM05D000976 ORTHO05D000847 1.8e-07 59.3 50 60.0
ATR0561G113 Amborella trichopoda HOM05D000976 ORTHO05D000847 2.3e-07 58.9 38 60.5
AL2G25960 Arabidopsis lyrata HOM05D000976 ORTHO05D000847 2.3e-07 58.9 50 60.0
AT1G67400 Arabidopsis thaliana HOM05D000976 ORTHO05D000847 2.3e-07 58.9 50 60.0
CARHR059920 Cardamine hirsuta HOM05D000976 ORTHO05D000847 1.2e-06 56.6 44 59.1
A02p14210 Brassica napus HOM05D000976 ORTHO05D000847 2.6e-06 55.5 57 54.4
BraA02t06483Z Brassica rapa HOM05D000976 ORTHO05D000847 2.6e-06 55.5 57 54.4
BcaB05g24282 Brassica carinata HOM05D000976 ORTHO05D000847 3.4e-06 55.1 57 54.4
BcaC03g14839 Brassica carinata HOM05D000976 ORTHO05D000847 3.4e-06 55.1 57 54.4
C02p23000 Brassica napus HOM05D000976 ORTHO05D000847 3.4e-06 55.1 57 54.4
FAN12G1595 Fragaria x ananassa HOM05D000976 ORTHO05D000847 7.5e-06 53.9 29 69.0


User provided reference genes

Program Settings