Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 3.0e-142 508.4 250 100.0
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 3.8e-129 464.9 250 90.4
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 2.2e-108 396.0 248 79.4
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 4.9e-108 394.8 244 78.7
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 2.0e-106 389.4 250 77.2
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 4.6e-106 388.3 250 76.8
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 1.5e-104 383.3 244 76.6
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 2.5e-104 382.5 221 81.4
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 2.5e-104 382.5 250 75.6
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 3.3e-104 382.1 250 75.2
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 2.1e-103 379.4 244 76.2
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 4.7e-103 378.3 249 75.9
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 8.1e-103 377.5 250 73.6
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 1.1e-102 377.1 252 74.2
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 1.5e-101 373.2 258 72.5
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 5.8e-101 371.3 236 75.4
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 2.2e-100 369.4 248 73.8
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 3.7e-100 368.6 248 73.8
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 6.4e-100 367.9 249 71.1
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 6.4e-100 367.9 248 74.2
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 8.3e-100 367.5 248 74.2
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 1.1e-99 367.1 252 70.6
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 1.9e-99 366.3 247 69.2
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 1.9e-99 366.3 230 74.8
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 5.4e-99 364.8 222 74.8
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 5.4e-99 364.8 255 71.0
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 7.1e-99 364.4 249 71.5
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 9.2e-99 364.0 247 68.4
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 1.6e-98 363.2 247 69.2
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 1.6e-98 363.2 248 70.6
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 2.1e-98 362.8 221 76.5
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 2.7e-98 362.5 248 69.4
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 3.5e-98 362.1 247 69.2
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 3.5e-98 362.1 252 69.8
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 3.5e-98 362.1 248 72.6
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 6.0e-98 361.3 217 78.3
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 6.0e-98 361.3 252 70.2
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 7.8e-98 360.9 247 68.8
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 7.8e-98 360.9 221 76.0
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 1.3e-97 360.1 244 71.7
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 1.7e-97 359.8 247 68.4
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 1.7e-97 359.8 246 69.1
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 2.3e-97 359.4 222 73.4
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 5.1e-97 358.2 228 75.4
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 5.1e-97 358.2 222 73.4
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 8.6e-97 357.5 255 67.1
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 1.1e-96 357.1 225 73.8
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 2.5e-96 355.9 248 67.3
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 3.3e-96 355.5 248 67.7
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 3.3e-96 355.5 220 76.4
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 4.3e-96 355.1 221 75.1
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 4.3e-96 355.1 248 67.7
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 4.3e-96 355.1 239 70.3
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 4.3e-96 355.1 245 69.4
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 5.6e-96 354.8 247 69.6
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 5.6e-96 354.8 231 72.3
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 7.3e-96 354.4 248 66.9
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 7.3e-96 354.4 246 68.7
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 1.2e-95 353.6 217 76.0
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 1.2e-95 353.6 221 73.3
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 1.6e-95 353.2 228 70.6
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 1.6e-95 353.2 222 72.1
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 2.1e-95 352.8 243 70.0
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 3.6e-95 352.1 243 67.9
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 4.7e-95 351.7 271 68.3
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 8.1e-95 350.9 227 74.0
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 8.1e-95 350.9 248 68.5
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 1.1e-94 350.5 248 66.9
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 1.4e-94 350.1 254 70.5
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 1.4e-94 350.1 228 69.7
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 1.8e-94 349.7 240 67.9
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 3.1e-94 349.0 224 73.7
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 5.2e-94 348.2 214 74.8
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 6.8e-94 347.8 220 72.3
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 6.8e-94 347.8 249 67.5
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 8.9e-94 347.4 231 70.6
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 1.2e-93 347.1 220 71.8
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 2.0e-93 346.3 230 73.0
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 2.0e-93 346.3 236 68.2
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 3.4e-93 345.5 239 69.0
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 4.4e-93 345.1 228 70.2
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 4.4e-93 345.1 243 70.0
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 4.4e-93 345.1 217 75.1
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 7.6e-93 344.4 231 69.7
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 9.9e-93 344.0 241 67.6
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 1.3e-92 343.6 217 74.2
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 1.7e-92 343.2 250 67.6
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 2.2e-92 342.8 251 65.3
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 1.4e-91 340.1 215 73.5
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 9.2e-91 337.4 221 71.0
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 7.8e-90 334.3 221 73.8
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 3.3e-88 328.9 205 76.1
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 5.6e-88 328.2 288 59.7
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 1.2e-87 327.0 228 66.2
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 1.8e-86 323.2 235 67.7
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 3.1e-86 322.4 199 73.9
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 2.9e-84 315.8 339 51.0
HPP92_007421 Vanilla planifolia HOM05D006155 ORTHO05D007529 4.8e-79 298.5 200 69.5
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 5.3e-78 295.0 195 71.3
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 1.5e-77 293.5 206 67.5
MBI07_g08907_MAGBIO Magnolia biondii HOM05D006155 ORTHO05D007529 2.4e-75 286.2 196 70.9
Sc04g0004680 Simmondsia chinensis HOM05D006155 ORTHO05D007529 6.7e-73 278.1 165 78.2
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 1.1e-70 270.8 228 58.8
SMO165G0032 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 2.0e-69 266.5 212 61.3
Pp3c17_6550 Physcomitrium patens HOM05D006155 ORTHO05D007529 6.2e-63 245.0 232 53.4
Pp3c2_6750 Physcomitrium patens HOM05D006155 ORTHO05D007529 2.5e-59 233.0 224 51.8
TAR365G0649 Trochodendron aralioides HOM05D006155 ORTHO05D007529 3.5e-58 229.2 141 77.3
LjContig00022g0011299 Lotus japonicus HOM05D006155 ORTHO05D007529 1.1e-51 207.6 167 61.7
MCO11G090 Micromonas commoda HOM05D006155 ORTHO05D007529 6.3e-47 191.8 213 48.8
CiPaw.01G175800 Carya illinoinensis HOM05D006155 ORTHO05D007529 1.5e-45 187.2 101 83.2
Psat6g138760 Pisum sativum HOM05D006155 ORTHO05D007529 2.0e-45 186.8 126 71.4
QL06p021877 Quercus lobata HOM05D006155 ORTHO05D007529 3.1e-38 162.9 104 74.0
Cre03.g193000 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 9.1e-38 161.4 211 43.1
SMO115G0208 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 5.5e-35 152.1 212 42.0
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 2.8e-31 139.8 210 39.5
AUR62035887 Chenopodium quinoa HOM05D006155 ORTHO05D007529 3.5e-29 132.9 91 67.0
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 5.9e-29 132.1 95 65.3
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 5.9e-29 132.1 95 65.3
Zm00001eb191500 Zea mays HOM05D006155 ORTHO05D007529 1.7e-28 130.6 95 66.3
Rhsim09G0043000 Rhododendron simsii HOM05D006155 ORTHO05D007529 6.5e-28 128.6 114 58.8
Lj5g0004239 Lotus japonicus HOM05D006155 ORTHO05D007529 3.6e-26 122.9 161 44.7
Lj5g0006737 Lotus japonicus HOM05D006155 ORTHO05D007529 3.6e-26 122.9 161 44.7
SEGI_12787 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 8.8e-25 118.2 96 63.5
Actinidia37388 Actinidia chinensis HOM05D006155 ORTHO05D007529 1.8e-22 110.5 61 80.3
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 5.9e-21 105.5 94 58.5
SEGI_32209 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 1.5e-19 100.9 82 61.0
Cre01.g025100 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 2.5e-19 100.1 207 33.8
Rhsim09G0048000 Rhododendron simsii HOM05D000029 ORTHO05D002162 2.0e-16 90.5 73 60.3
SGA_v2.0_scaffold31G12618 Striga asiatica HOM05D006155 ORTHO05D007529 2.0e-16 90.5 188 34.0
AUR62035886 Chenopodium quinoa HOM05D006155 ORTHO05D007529 3.4e-16 89.7 55 76.4
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 2.0e-13 80.5 180 33.3
SalBow7G2104 Salvia bowleyana HOM05D000708 ORTHO05D001418 1.7e-12 77.4 48 72.9
C09p23060 Brassica napus HOM05D006155 ORTHO05D007529 3.8e-12 76.3 69 56.5


User provided reference genes

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