Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0033900 Salix brachista HOM05D004833 ORTHO05D005671 4.3e-201 704.5 375 100.0
Potri.010G074900 Populus trichocarpa HOM05D004833 ORTHO05D005671 7.7e-174 614.0 384 86.5
Manes.03G168000 Manihot esculenta HOM05D004833 ORTHO05D005671 1.8e-90 337.0 399 53.6
Cfa008364 Carpinus fangiana HOM05D004833 ORTHO05D005671 6.1e-62 242.3 504 40.1
Cpa.g.sc44.108 Carica papaya HOM05D004833 ORTHO05D005671 1.2e-57 228.0 419 41.8
Duzib212G0317 Durio zibethinus HOM05D004833 ORTHO05D005671 5.1e-53 212.6 394 40.4
Gorai.005G047200 Gossypium raimondii HOM05D004833 ORTHO05D005671 7.4e-52 208.8 396 40.9
Thecc.04G248100 Theobroma cacao HOM05D004833 ORTHO05D005671 4.1e-50 203.0 420 40.5
Gohir.D02G042900 Gossypium hirsutum HOM05D004833 ORTHO05D005671 9.1e-50 201.8 390 40.3
MD16G1211500 Malus domestica HOM05D004833 ORTHO05D005671 1.2e-49 201.4 390 40.8
TWI53G1508 Tripterygium wilfordii HOM05D004833 ORTHO05D005671 1.2e-49 201.4 383 41.5
TWI53G1633 Tripterygium wilfordii HOM05D004833 ORTHO05D005671 1.2e-49 201.4 383 41.5
FAN17G0043 Fragaria x ananassa HOM05D004833 ORTHO05D005671 2.0e-49 200.7 455 37.4
TWI09G0514 Tripterygium wilfordii HOM05D004833 ORTHO05D005671 2.0e-49 200.7 391 40.2
Gohir.A02G036200 Gossypium hirsutum HOM05D004833 ORTHO05D005671 1.1e-47 194.9 393 39.2
ClCG05G004520 Citrullus lanatus HOM05D004833 ORTHO05D005671 7.2e-47 192.2 424 38.9
Ciclev10004978m.g Citrus clementina HOM05D004833 ORTHO05D005671 9.4e-47 191.8 468 36.8
FAN17G0464 Fragaria x ananassa HOM05D004833 ORTHO05D005671 9.4e-47 191.8 460 35.2
QL06p016027 Quercus lobata HOM05D004833 ORTHO05D005671 2.1e-46 190.7 454 35.5
FAN12G1135 Fragaria x ananassa HOM05D004833 ORTHO05D005671 6.1e-46 189.1 498 33.7
RcHm_v2.0_Chr4g0391131 Rosa chinensis HOM05D004833 ORTHO05D005671 6.1e-46 189.1 431 36.9
FvH4_4g02980 Fragaria vesca HOM05D004833 ORTHO05D005671 8.0e-46 188.7 500 34.2
Sed0021810 Sechium edule HOM05D004833 ORTHO05D005671 8.0e-46 188.7 393 38.9
CSS0034891 Camellia sinensis var. sinensis HOM05D004833 ORTHO05D005671 3.0e-45 186.8 451 35.5
CANSAT78G0301 Cannabis sativa HOM05D004833 ORTHO05D005671 5.2e-45 186.0 375 39.5
Atru.chr4.2164 Acer truncatum HOM05D004833 ORTHO05D005671 6.7e-45 185.7 430 36.3
CiPaw.02G115600 Carya illinoinensis HOM05D004833 ORTHO05D005671 8.8e-45 185.3 397 38.8
CsaV3_3G012480 Cucumis sativus L. HOM05D004833 ORTHO05D005671 8.8e-45 185.3 412 35.9
MELO3C006459.2 Cucumis melo HOM05D004833 ORTHO05D005671 4.4e-44 183.0 413 36.8
Ciclev10005174m.g Citrus clementina HOM05D004833 ORTHO05D005671 7.4e-44 182.2 396 38.1
RcHm_v2.0_Chr7g0224291 Rosa chinensis HOM05D004833 ORTHO05D005671 9.7e-44 181.8 373 38.3
Actinidia40079 Actinidia chinensis HOM05D004833 ORTHO05D005671 1.7e-43 181.0 449 34.7
COL.COLO4_15806 Corchorus olitorius HOM05D004833 ORTHO05D005671 1.7e-43 181.0 389 36.0
Prupe.1G033600 Prunus persica HOM05D004833 ORTHO05D005671 8.2e-43 178.7 417 37.4
Phvul.002G328500 Phaseolus vulgaris HOM05D004833 ORTHO05D005671 7.0e-42 175.6 402 35.1
FAN12G1996 Fragaria x ananassa HOM05D004833 ORTHO05D005671 9.1e-42 175.3 261 44.8
PGR004G1107 Punica granatum HOM05D004833 ORTHO05D005671 1.2e-41 174.9 465 35.3
Dinv29897 Davidia involucrata HOM05D004833 ORTHO05D005671 2.6e-41 173.7 432 36.3
SHI08746 Sapria himalayana HOM05D004833 ORTHO05D005671 7.7e-41 172.2 395 36.2
BraA05t23142Z Brassica rapa HOM05D004833 ORTHO05D005671 1.3e-40 171.4 423 34.3
A05p45200 Brassica napus HOM05D004833 ORTHO05D005671 2.9e-40 170.2 384 35.4
Rhsim11G0181500 Rhododendron simsii HOM05D004833 ORTHO05D005671 2.5e-39 167.2 407 38.3
CANSAT25G0083 Cannabis sativa HOM05D004833 ORTHO05D005671 1.6e-38 164.5 363 37.7
RcHm_v2.0_Chr7g0211851 Rosa chinensis HOM05D004833 ORTHO05D005671 2.7e-38 163.7 368 36.4
FAN28G1505 Fragaria x ananassa HOM05D004833 ORTHO05D005671 4.7e-38 162.9 520 32.9
arahy.Tifrunner.gnm1.ann1.CY5RP0 Arachis hypogaea HOM05D004833 ORTHO05D005671 6.1e-38 162.5 468 31.4
Eucgr.G02729 Eucalyptus grandis HOM05D004833 ORTHO05D005671 6.1e-38 162.5 417 36.7
Medtr4g088240 Medicago truncatula HOM05D004833 ORTHO05D005671 8.0e-38 162.2 382 35.1
QL04p071625 Quercus lobata HOM05D004833 ORTHO05D005671 8.0e-38 162.2 382 37.7
BcaC01g04448 Brassica carinata HOM05D004833 ORTHO05D005671 1.0e-37 161.8 460 32.6
Thhalv10020728m.g Eutrema salsugineum HOM05D004833 ORTHO05D005671 1.8e-37 161.0 448 32.1
arahy.Tifrunner.gnm1.ann1.DI6KST Arachis hypogaea HOM05D004833 ORTHO05D005671 3.0e-37 160.2 457 32.8
Lj4g0026393 Lotus japonicus HOM05D004833 ORTHO05D005671 3.0e-37 160.2 415 34.7
BcaB04g21413 Brassica carinata HOM05D004833 ORTHO05D005671 4.0e-37 159.8 433 33.5
AT4G14490 Arabidopsis thaliana HOM05D004833 ORTHO05D005671 5.2e-37 159.5 387 35.7
Rhsim04G0155000 Rhododendron simsii HOM05D004833 ORTHO05D005671 6.8e-37 159.1 432 34.5
VMungo0251G0345 Vigna mungo HOM05D004833 ORTHO05D005671 6.8e-37 159.1 441 32.9
Carub.0007s2773 Capsella rubella HOM05D004833 ORTHO05D005671 1.5e-36 157.9 401 33.9
Glyma.07G201900 Glycine max HOM05D004833 ORTHO05D005671 1.5e-36 157.9 470 31.9
BraSC141t45625Z Brassica rapa HOM05D004833 ORTHO05D005671 3.4e-36 156.8 464 33.8
Duzib151G1051 Durio zibethinus HOM05D004833 ORTHO05D005671 5.7e-36 156.0 370 35.1
MSTRG.24695 Avicennia marina HOM05D004833 ORTHO05D005671 7.5e-36 155.6 447 32.7
Lalb_Chr05g0218581 Lupinus albus HOM05D004833 ORTHO05D005671 7.5e-36 155.6 418 35.2
C03p40050 Brassica napus HOM05D005209 ORTHO05D006188 1.7e-35 154.5 475 30.1
BolC3t16270H Brassica oleracea HOM05D005209 ORTHO05D006188 1.7e-35 154.5 475 30.1
BcaC01g04551 Brassica carinata HOM05D004833 ORTHO05D005671 4.8e-35 152.9 454 33.5
BNapus_Darmor_BZH_scaffold_208p00080 Brassica napus HOM05D004833 ORTHO05D005671 4.8e-35 152.9 462 32.5
BcaC09g47698 Brassica carinata HOM05D004833 ORTHO05D005671 6.3e-35 152.5 475 32.4
BraA03t12461Z Brassica rapa HOM05D005209 ORTHO05D006188 8.3e-35 152.1 462 31.6
Sp3g01440 Schrenkiella parvula HOM05D004833 ORTHO05D005671 3.1e-34 150.2 502 29.5
THA.LOC104808605 Tarenaya hassleriana HOM05D004833 ORTHO05D005671 4.1e-34 149.8 582 29.2
BolC1t05907H Brassica oleracea HOM05D004833 ORTHO05D005671 7.0e-34 149.1 475 32.2
Aqoxy4G02560 Aquilegia oxysepala HOM05D004833 ORTHO05D005671 1.2e-33 148.3 409 33.3
DCAR_028835 Daucus carota HOM05D004833 ORTHO05D005671 1.6e-33 147.9 372 34.4
MD13G1205500 Malus domestica HOM05D004833 ORTHO05D005671 2.7e-33 147.1 374 35.6
SalBow3G2302 Salvia bowleyana HOM05D004833 ORTHO05D005671 2.7e-33 147.1 409 32.0
SGA_v2.0_scaffold308G48094 Striga asiatica HOM05D004833 ORTHO05D005671 2.9e-32 143.7 420 32.6
TPR.G14924 Trifolium pratense HOM05D004833 ORTHO05D005671 2.9e-32 143.7 386 32.6
Hma1.2p1_0310F.1_g120780 Hydrangea macrophylla HOM05D004833 ORTHO05D005671 5.0e-32 142.9 485 31.5
Lsat_1_v5_gn_4_144160 Lactuca sativa HOM05D004833 ORTHO05D005671 6.5e-32 142.5 421 33.7
Nn4g25548 Nelumbo nucifera HOM05D004833 ORTHO05D005671 8.5e-32 142.1 460 31.7
AT3G02400 Arabidopsis thaliana HOM05D004833 ORTHO05D005671 9.4e-31 138.7 521 28.8
BcaC05g30352 Brassica carinata HOM05D004833 ORTHO05D005671 1.2e-30 138.3 436 32.3
A03p32920 Brassica napus HOM05D004833 ORTHO05D005671 2.7e-30 137.1 492 30.1
MBI19_g03257_MAGBIO Magnolia biondii HOM05D004833 ORTHO05D005671 6.1e-30 136.0 412 31.6
C09p75700 Brassica napus HOM05D004833 ORTHO05D005671 8.0e-30 135.6 436 32.1
Migut.N00255 Erythranthe guttata HOM05D004833 ORTHO05D005671 1.0e-29 135.2 437 30.7
Oeu002595.1 Olea europaea HOM05D004833 ORTHO05D005671 1.8e-29 134.4 468 31.8
TAR362G1060 Trochodendron aralioides HOM05D004833 ORTHO05D005671 1.8e-29 134.4 472 32.0
TAR633G1100 Trochodendron aralioides HOM05D004833 ORTHO05D005671 1.8e-29 134.4 460 29.3
unitig_899.g14712 Utricularia gibba HOM05D004833 ORTHO05D005671 1.8e-29 134.4 438 31.1
Lj6P658T33 Lonicera japonica HOM05D004833 ORTHO05D005671 2.3e-29 134.0 217 46.1
Carub.0003s0149 Capsella rubella HOM05D004833 ORTHO05D005671 6.8e-29 132.5 277 34.3
Ca_18598_v3 Cicer arietinum L. HOM05D004833 ORTHO05D005671 6.8e-29 132.5 421 31.4
Aa31LG8G9600 Aethionema arabicum HOM05D004833 ORTHO05D005671 8.8e-29 132.1 547 28.3
Aa31LG9G2800 Aethionema arabicum HOM05D004833 ORTHO05D005671 8.8e-29 132.1 142 52.1
Sc25g0004110 Simmondsia chinensis HOM05D004833 ORTHO05D005671 1.5e-28 131.3 496 28.4
PSO210G7662 Papaver somniferum HOM05D004833 ORTHO05D005671 2.6e-28 130.6 443 32.3
AL7G41650 Arabidopsis lyrata HOM05D004833 ORTHO05D005671 3.4e-28 130.2 370 33.2
Peaxi162Scf00209g00118 Petunia axillaris HOM05D004833 ORTHO05D005671 5.7e-28 129.4 478 28.9
PSO761G0588 Papaver somniferum HOM05D004833 ORTHO05D005671 9.8e-28 128.6 437 29.7
Glyma.13G174400 Glycine max HOM05D004833 ORTHO05D005671 1.3e-27 128.3 523 28.1
Lj4g0009172 Lotus japonicus HOM05D004833 ORTHO05D005671 1.3e-27 128.3 472 28.8
EL10Ac7g16793 Beta vulgaris HOM05D004833 ORTHO05D005671 1.7e-27 127.9 139 53.2
CARHR076370 Cardamine hirsuta HOM05D004833 ORTHO05D005671 2.8e-27 127.1 298 32.6
HanXRQChr05g0145861 Helianthus annuus HOM05D004833 ORTHO05D005671 1.4e-26 124.8 400 34.2
HanXRQChr11g0331421 Helianthus annuus HOM05D004833 ORTHO05D005671 1.4e-26 124.8 400 34.2
Psat7g116640 Pisum sativum HOM05D004833 ORTHO05D005671 1.4e-26 124.8 146 46.6
CDE09G0593 Ceratophyllum demersum HOM05D004833 ORTHO05D005671 1.6e-25 121.3 423 29.6
DCAR_024234 Daucus carota HOM05D004833 ORTHO05D005671 2.0e-25 120.9 423 30.5
HanXRQChr09g0257341 Helianthus annuus HOM05D004833 ORTHO05D005671 2.7e-25 120.6 389 30.8
AL3G11690 Arabidopsis lyrata HOM05D004833 ORTHO05D005671 1.7e-24 117.9 297 33.7
Ah.15g090410 Amaranthus hybridus HOM05D004833 ORTHO05D005671 1.5e-23 114.8 143 47.6
ECA232G0897 Erigeron canadensis HOM05D004833 ORTHO05D005671 4.2e-23 113.2 108 49.1
ECA232G1138 Erigeron canadensis HOM05D004833 ORTHO05D005671 4.2e-23 113.2 160 45.6
ECA234G1378 Erigeron canadensis HOM05D000038 ORTHO05D000423 2.1e-22 110.9 156 43.6
Sopen08g026960 Solanum pennellii HOM05D004833 ORTHO05D005671 2.1e-22 110.9 496 26.6
Medtr8g069140 Medicago truncatula HOM05D004833 ORTHO05D005671 3.6e-22 110.2 505 27.7
Nitab4.5_0001381g0160 Nicotiana tabacum HOM05D004833 ORTHO05D005671 4.7e-22 109.8 203 37.9
CDE02G0054 Ceratophyllum demersum HOM05D004833 ORTHO05D005671 6.1e-22 109.4 420 29.0
Medtr4g088235 Medicago truncatula HOM05D004833 ORTHO05D005671 6.1e-22 109.4 505 25.7
Solyc08g078470.4 Solanum lycopersicum HOM05D004833 ORTHO05D005671 3.0e-21 107.1 204 37.7
HPP92_002667 Vanilla planifolia HOM05D004833 ORTHO05D005671 4.0e-21 106.7 366 29.5
HPP92_002726 Vanilla planifolia HOM05D004833 ORTHO05D005671 5.7e-20 102.8 152 41.4
PGSC0003DMG400004768 Solanum tuberosum HOM05D004833 ORTHO05D005671 8.3e-19 99.0 497 24.7
ATR0693G179 Amborella trichopoda HOM05D004833 ORTHO05D005671 1.1e-18 98.6 372 29.6
CAN.G1178.27 Capsicum annuum HOM05D004833 ORTHO05D005671 4.1e-18 96.7 520 25.0
SEGI_17679 Sequoiadendron giganteum HOM05D004833 ORTHO05D005671 1.6e-17 94.7 103 46.6
unitig_52.g17411 Utricularia gibba HOM05D004833 ORTHO05D005671 1.6e-17 94.7 320 31.2
Os03g0728500 Oryza sativa ssp. japonica HOM05D004833 ORTHO05D005671 3.5e-17 93.6 103 43.7
Cfa008363 Carpinus fangiana HOM05D004833 ORTHO05D005671 3.9e-16 90.1 191 39.3
Nitab4.5_0002289g0040 Nicotiana tabacum HOM05D004833 ORTHO05D005671 8.6e-16 89.0 524 24.6
HPP92_014115 Vanilla planifolia HOM05D004833 ORTHO05D005671 5.6e-15 86.3 380 28.4
Zm00001eb215540 Zea mays HOM05D004833 ORTHO05D005671 2.8e-14 84.0 128 39.1
BolC5t35084H Brassica oleracea HOM05D004833 ORTHO05D005671 6.2e-14 82.8 99 49.5
Zm00001eb056120 Zea mays HOM05D004833 ORTHO05D005671 5.2e-13 79.7 164 35.4
Actinidia04469 Actinidia chinensis HOM05D004833 ORTHO05D005671 1.3e-11 75.1 290 33.1
CiPaw.01G189200 Carya illinoinensis HOM05D004833 ORTHO05D005671 1.3e-11 75.1 159 36.5
Phvul.002G234300 Phaseolus vulgaris HOM05D004833 ORTHO05D005671 1.1e-10 72.0 52 63.5
Pp3c19_11080 Physcomitrium patens HOM05D004833 ORTHO05D005671 5.4e-10 69.7 138 34.8
Pp3c18_4140 Physcomitrium patens HOM05D004833 ORTHO05D005671 3.0e-08 63.9 102 39.2
CBR_g21751 Chara braunii HOM05D004833 ORTHO05D005671 6.6e-08 62.8 99 35.4
Mapoly0067s0089 Marchantia polymorpha HOM05D004833 ORTHO05D005671 6.6e-08 62.8 143 30.8
SalBow5G1669 Salvia bowleyana HOM05D004938 ORTHO05D006035 1.5e-07 61.6 121 38.0
SalBow5G2418 Salvia bowleyana HOM05D004938 ORTHO05D006035 1.5e-07 61.6 121 38.0
PRCOL_00002026 Prasinoderma coloniale HOM05D004833 ORTHO05D005671 1.9e-07 61.2 110 37.3
BcaC08g43040 Brassica carinata HOM05D010442 ORTHO05D010690 4.3e-07 60.1 81 46.9
Lj6P658T32 Lonicera japonica HOM05D004833 ORTHO05D005671 5.6e-07 59.7 117 34.2
BolC6t35423H Brassica oleracea HOM05D010442 ORTHO05D010690 3.6e-06 57.0 89 44.9
Potri.008G149700 Populus trichocarpa HOM05D004938 ORTHO05D006035 8.1e-06 55.8 114 34.2


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