Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0030300 Salix brachista HOM05D007453 ORTHO05D009223 6.3e-90 334.3 202 100.0
Potri.010G034500 Populus trichocarpa HOM05D007453 ORTHO05D009223 1.6e-72 276.6 202 87.6
Thecc.02G232500 Theobroma cacao HOM05D007453 ORTHO05D009223 6.6e-55 218.0 152 76.3
COL.COLO4_36183 Corchorus olitorius HOM05D007453 ORTHO05D009223 4.3e-54 215.3 152 74.3
QL03p065949 Quercus lobata HOM05D007453 ORTHO05D009223 1.6e-53 213.4 153 73.9
Prupe.1G267100 Prunus persica HOM05D007453 ORTHO05D009223 3.6e-53 212.2 153 70.6
Manes.05G095900 Manihot esculenta HOM05D007453 ORTHO05D009223 6.2e-53 211.5 200 71.5
TWI75G0120 Tripterygium wilfordii HOM05D007453 ORTHO05D009223 3.1e-52 209.1 190 61.6
Duzib248G0401 Durio zibethinus HOM05D007453 ORTHO05D009223 4.0e-52 208.8 152 73.0
Cfa009043 Carpinus fangiana HOM05D007453 ORTHO05D009223 6.8e-52 208.0 152 68.4
Duzib248G0483 Durio zibethinus HOM05D007453 ORTHO05D009223 1.2e-51 207.2 152 73.0
Ciclev10032837m.g Citrus clementina HOM05D007453 ORTHO05D009223 3.4e-51 205.7 152 72.4
CiPaw.05G140500 Carya illinoinensis HOM05D007453 ORTHO05D009223 9.9e-51 204.1 152 69.1
Gohir.D05G323400 Gossypium hirsutum HOM05D007453 ORTHO05D009223 1.3e-50 203.8 152 68.4
Atru.chr11.1862 Acer truncatum HOM05D007453 ORTHO05D009223 2.9e-50 202.6 146 72.6
Duzib251G0796 Durio zibethinus HOM05D007453 ORTHO05D009223 4.9e-50 201.8 202 69.3
Gohir.A05G321200 Gossypium hirsutum HOM05D007453 ORTHO05D009223 8.3e-50 201.1 147 70.1
Gorai.009G347100 Gossypium raimondii HOM05D007453 ORTHO05D009223 1.1e-49 200.7 200 66.5
PGR119G1700 Punica granatum HOM05D007453 ORTHO05D009223 1.2e-48 197.2 152 70.4
Lalb_Chr10g0097941 Lupinus albus HOM05D007453 ORTHO05D009223 2.7e-48 196.1 201 58.2
arahy.Tifrunner.gnm1.ann1.QA8CWD Arachis hypogaea HOM05D007453 ORTHO05D009223 6.0e-48 194.9 201 57.2
CsaV3_5G032280 Cucumis sativus L. HOM05D007453 ORTHO05D009223 2.3e-47 193.0 152 68.4
MELO3C012060.2 Cucumis melo HOM05D007453 ORTHO05D009223 5.1e-47 191.8 152 67.8
Phvul.002G067300 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 8.6e-47 191.0 153 69.3
Ca_07373_v3 Cicer arietinum L. HOM05D007453 ORTHO05D009223 1.1e-46 190.7 153 68.6
arahy.Tifrunner.gnm1.ann1.D3ZUUX Arachis hypogaea HOM05D007453 ORTHO05D009223 1.5e-46 190.3 201 56.2
Lj2g0026857 Lotus japonicus HOM05D007453 ORTHO05D009223 1.9e-46 189.9 154 68.2
Glyma.02G022351 Glycine max HOM05D007453 ORTHO05D009223 2.5e-46 189.5 148 68.2
VMungo1215G3437 Vigna mungo HOM05D007453 ORTHO05D009223 2.5e-46 189.5 153 67.3
Haze_12073 Corylus avellana HOM05D007453 ORTHO05D009223 3.3e-46 189.1 181 56.9
TPR.G29466 Trifolium pratense HOM05D007453 ORTHO05D009223 3.3e-46 189.1 153 67.3
Glyma.01G041651 Glycine max HOM05D007453 ORTHO05D009223 5.6e-46 188.3 153 66.7
Dinv24949 Davidia involucrata HOM05D007453 ORTHO05D009223 9.6e-46 187.6 202 55.9
Medtr5g038225 Medicago truncatula HOM05D007453 ORTHO05D009223 9.6e-46 187.6 154 68.2
Actinidia08212 Actinidia chinensis HOM05D007453 ORTHO05D009223 3.6e-45 185.7 198 55.6
FAN22G0202 Fragaria x ananassa HOM05D007453 ORTHO05D009223 3.6e-45 185.7 155 63.9
RcHm_v2.0_Chr4g0440771 Rosa chinensis HOM05D007453 ORTHO05D009223 3.6e-45 185.7 154 63.6
FAN07G0059 Fragaria x ananassa HOM05D007453 ORTHO05D009223 4.7e-45 185.3 155 63.2
FvH4_4g32080 Fragaria vesca HOM05D007453 ORTHO05D009223 1.1e-44 184.1 155 62.6
Cpa.g.sc1379.2 Carica papaya HOM05D007453 ORTHO05D009223 5.2e-44 181.8 154 64.9
MD13G1079700 Malus domestica HOM05D007453 ORTHO05D009223 1.5e-43 180.3 210 55.2
TAR481G0010 Trochodendron aralioides HOM05D007453 ORTHO05D009223 4.4e-43 178.7 152 63.8
Eucgr.B03407 Eucalyptus grandis HOM05D007453 ORTHO05D009223 5.8e-43 178.3 153 63.4
Phvul.002G077900 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 9.9e-43 177.6 153 64.1
Psat2g125360 Pisum sativum HOM05D007453 ORTHO05D009223 9.9e-43 177.6 154 65.6
ClCG05G024650 Citrullus lanatus HOM05D007453 ORTHO05D009223 2.2e-42 176.4 145 65.5
Sed0013591 Sechium edule HOM05D007453 ORTHO05D009223 2.2e-42 176.4 160 61.2
Thhalv10008803m.g Eutrema salsugineum HOM05D007453 ORTHO05D009223 8.4e-42 174.5 157 61.8
Sp1g21730 Schrenkiella parvula HOM05D007453 ORTHO05D009223 1.1e-41 174.1 160 60.0
Actinidia19855 Actinidia chinensis HOM05D007453 ORTHO05D009223 1.4e-41 173.7 152 63.8
Aa31LG7G8100 Aethionema arabicum HOM05D007453 ORTHO05D009223 5.4e-41 171.8 166 57.8
THA.LOC104822931 Tarenaya hassleriana HOM05D007453 ORTHO05D009223 7.1e-41 171.4 157 59.9
vmacro16323 Vaccinium macrocarpon HOM05D007453 ORTHO05D009223 7.1e-41 171.4 202 53.0
Carub.0001s2392 Capsella rubella HOM05D007453 ORTHO05D009223 9.3e-41 171.0 210 56.7
GSVIVG01020080001 Vitis vinifera HOM05D007453 ORTHO05D009223 2.1e-40 169.9 152 65.1
BcaC06g35095 Brassica carinata HOM05D007453 ORTHO05D009223 7.8e-40 167.9 156 57.7
Hund05917 Selenicereus undatus HOM05D007453 ORTHO05D009223 7.8e-40 167.9 202 59.9
CSS0012607 Camellia sinensis var. sinensis HOM05D007453 ORTHO05D009223 1.3e-39 167.2 152 61.2
C07p19880 Brassica napus HOM05D007453 ORTHO05D009223 1.7e-39 166.8 156 57.7
BolC7t42507H Brassica oleracea HOM05D007453 ORTHO05D009223 1.7e-39 166.8 156 57.7
Solyc05g006960.3 Solanum lycopersicum HOM05D007453 ORTHO05D009223 1.7e-39 166.8 210 48.6
Sopen05g002920 Solanum pennellii HOM05D007453 ORTHO05D009223 1.7e-39 166.8 210 48.6
Cc11_g13560 Coffea canephora HOM05D007453 ORTHO05D009223 8.7e-39 164.5 226 46.9
PGSC0003DMG400017639 Solanum tuberosum HOM05D007453 ORTHO05D009223 8.7e-39 164.5 210 47.6
ECA246G4987 Erigeron canadensis HOM05D007453 ORTHO05D009223 2.5e-38 162.9 220 47.3
AL1G38440 Arabidopsis lyrata HOM05D007453 ORTHO05D009223 1.3e-37 160.6 160 58.1
EL10Ac6g13141 Beta vulgaris HOM05D007453 ORTHO05D009223 1.3e-37 160.6 154 59.1
HanXRQChr17g0544601 Helianthus annuus HOM05D007453 ORTHO05D009223 1.3e-37 160.6 212 48.1
AT1G27050 Arabidopsis thaliana HOM05D007453 ORTHO05D009223 2.1e-37 159.8 160 55.6
BcaB03g14102 Brassica carinata HOM05D007453 ORTHO05D009223 6.2e-37 158.3 157 55.4
CARHR024860 Cardamine hirsuta HOM05D007453 ORTHO05D009223 8.1e-37 157.9 160 55.6
Nitab4.5_0000679g0070 Nicotiana tabacum HOM05D007453 ORTHO05D009223 8.1e-37 157.9 230 45.7
FAN12G0628 Fragaria x ananassa HOM05D007453 ORTHO05D009223 6.9e-36 154.8 155 56.8
Nitab4.5_0002969g0020 Nicotiana tabacum HOM05D007453 ORTHO05D009223 3.4e-35 152.5 230 54.8
MBI01_g12858_MAGBIO Magnolia biondii HOM05D007453 ORTHO05D009223 5.8e-35 151.8 154 56.5
CiPaw.06G080300 Carya illinoinensis HOM05D007453 ORTHO05D009223 9.9e-35 151.0 113 67.3
DCAR_031058 Daucus carota HOM05D007453 ORTHO05D009223 1.3e-34 150.6 210 50.0
MSTRG.13399 Avicennia marina HOM05D007453 ORTHO05D009223 1.7e-34 150.2 220 45.5
Lsat_1_v5_gn_3_49860 Lactuca sativa HOM05D007453 ORTHO05D009223 3.2e-33 146.0 190 48.9
SGA_v2.0_scaffold87G26973 Striga asiatica HOM05D007453 ORTHO05D009223 3.2e-33 146.0 222 41.0
Rhsim12G0129600 Rhododendron simsii HOM05D007453 ORTHO05D009223 4.2e-33 145.6 255 42.0
PSO591G0176 Papaver somniferum HOM05D007453 ORTHO05D009223 5.4e-33 145.2 156 57.1
PSO832G2667 Papaver somniferum HOM05D007453 ORTHO05D009223 1.2e-32 144.1 152 56.6
A07p13280 Brassica napus HOM05D007453 ORTHO05D009223 1.6e-32 143.7 152 55.3
BraA07t29098Z Brassica rapa HOM05D007453 ORTHO05D009223 2.1e-32 143.3 152 54.6
SalBow8G2121 Salvia bowleyana HOM05D007453 ORTHO05D009223 2.1e-32 143.3 224 47.3
Sc11g0001650 Simmondsia chinensis HOM05D007453 ORTHO05D009223 6.0e-32 141.7 152 54.6
Aqoxy3G03257 Aquilegia oxysepala HOM05D007453 ORTHO05D009223 6.6e-31 138.3 144 54.9
Peaxi162Scf00209g00516 Petunia axillaris HOM05D007453 ORTHO05D009223 6.6e-31 138.3 213 56.3
MSTRG.2362 Avicennia marina HOM05D007453 ORTHO05D009223 8.7e-31 137.9 224 43.3
CDE05G3569 Ceratophyllum demersum HOM05D007453 ORTHO05D009223 4.3e-30 135.6 153 48.4
Migut.E00119 Erythranthe guttata HOM05D007453 ORTHO05D009223 4.3e-30 135.6 230 46.1
ATR0665G072 Amborella trichopoda HOM05D007453 ORTHO05D009223 1.1e-28 131.0 154 52.6
unitig_62.g23683 Utricularia gibba HOM05D007453 ORTHO05D009223 1.2e-27 127.5 216 41.2
HPP92_001648 Vanilla planifolia HOM05D007453 ORTHO05D009223 5.1e-23 112.1 152 46.7
Dinv40682 Davidia involucrata HOM05D007453 ORTHO05D009223 3.1e-20 102.8 120 57.5
A07p13630 Brassica napus HOM05D007453 ORTHO05D009223 9.0e-20 101.3 126 50.0
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 6.5e-18 95.1 74 64.9
Lj6C173T12 Lonicera japonica HOM05D007453 ORTHO05D009223 3.2e-17 92.8 70 65.7
AUR62026264 Chenopodium quinoa HOM05D007453 ORTHO05D009223 5.5e-17 92.0 86 58.1
Nn4g23028 Nelumbo nucifera HOM05D007453 ORTHO05D009223 6.0e-16 88.6 86 58.1
HPP92_001630 Vanilla planifolia HOM05D007453 ORTHO05D009223 1.3e-13 80.9 97 49.5
Lj6C173T11 Lonicera japonica HOM05D007453 ORTHO05D009223 1.5e-11 73.9 91 49.5
Pp3c14_1800 Physcomitrium patens HOM05D030917 ORTHO05D009223 7.9e-08 61.6 156 28.8


User provided reference genes

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