Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0027300 Salix brachista HOM05D007009 ORTHO05D008451 4.4e-144 514.6 262 100.0
Potri.010G039466 Populus trichocarpa HOM05D007009 ORTHO05D008451 7.9e-93 344.4 263 70.7
Potri.008G191700 Populus trichocarpa HOM05D007009 ORTHO05D008451 3.7e-66 255.8 262 56.1
TWI18G0515 Tripterygium wilfordii HOM05D007009 ORTHO05D008451 5.0e-47 192.2 249 46.6
Manes.01G193800 Manihot esculenta HOM05D007009 ORTHO05D008451 9.5e-46 188.0 265 46.0
Dinv31143 Davidia involucrata HOM05D007009 ORTHO05D008451 3.6e-45 186.0 268 45.5
Ciclev10032750m.g Citrus clementina HOM05D007009 ORTHO05D008451 4.7e-45 185.7 233 49.8
Atru.chr11.1917 Acer truncatum HOM05D007009 ORTHO05D008451 1.0e-44 184.5 238 47.9
Cfa009076 Carpinus fangiana HOM05D007009 ORTHO05D008451 4.4e-43 179.1 256 45.7
COL.COLO4_36263 Corchorus olitorius HOM05D007009 ORTHO05D008451 9.8e-43 177.9 178 56.7
TAR374G0768 Trochodendron aralioides HOM05D007009 ORTHO05D008451 2.2e-42 176.8 232 48.3
GSVIVG01020129001 Vitis vinifera HOM05D007009 ORTHO05D008451 3.7e-42 176.0 231 48.5
Prupe.1G262900 Prunus persica HOM05D007009 ORTHO05D008451 4.9e-42 175.6 256 43.8
CsaV3_5G032050 Cucumis sativus L. HOM05D007009 ORTHO05D008451 1.4e-41 174.1 231 45.9
Gohir.A05G320100 Gossypium hirsutum HOM05D007009 ORTHO05D008451 1.4e-41 174.1 260 44.2
Duzib268G1291 Durio zibethinus HOM05D007009 ORTHO05D008451 4.1e-41 172.6 175 54.9
Dinv24931 Davidia involucrata HOM05D000094 ORTHO05D002904 9.2e-41 171.4 229 45.9
PGSC0003DMG401022631 Solanum tuberosum HOM05D007009 ORTHO05D008451 9.2e-41 171.4 181 53.6
Medtr5g037120 Medicago truncatula HOM05D007009 ORTHO05D008451 1.2e-40 171.0 266 41.4
ClCG05G024860 Citrullus lanatus HOM05D007009 ORTHO05D008451 1.6e-40 170.6 272 43.4
Nitab4.5_0001030g0090 Nicotiana tabacum HOM05D007009 ORTHO05D008451 1.6e-40 170.6 182 54.4
Nitab4.5_0008607g0010 Nicotiana tabacum HOM05D007009 ORTHO05D008451 1.6e-40 170.6 182 54.9
CSS0013437 Camellia sinensis var. sinensis HOM05D007009 ORTHO05D008451 3.5e-40 169.5 271 42.1
Peaxi162Scf00828g00312 Petunia axillaris HOM05D007009 ORTHO05D008451 3.5e-40 169.5 224 45.5
Sed0027578 Sechium edule HOM05D007009 ORTHO05D008451 4.6e-40 169.1 271 42.1
Glyma.01G038700 Glycine max HOM05D007009 ORTHO05D008451 6.0e-40 168.7 238 43.3
Gohir.D05G322400 Gossypium hirsutum HOM05D007009 ORTHO05D008451 6.0e-40 168.7 258 43.8
VMungo1215G0662 Vigna mungo HOM05D007009 ORTHO05D008451 6.0e-40 168.7 147 59.2
RcHm_v2.0_Chr4g0444991 Rosa chinensis HOM05D007009 ORTHO05D008451 7.8e-40 168.3 232 44.4
Thecc.02G237500 Theobroma cacao HOM05D007009 ORTHO05D008451 7.8e-40 168.3 265 43.8
Gorai.009G346000 Gossypium raimondii HOM05D007009 ORTHO05D008451 1.3e-39 167.5 258 43.8
Sopen05g002530 Solanum pennellii HOM05D007009 ORTHO05D008451 1.7e-39 167.2 182 51.1
CAN.G27.64 Capsicum annuum HOM05D007009 ORTHO05D008451 3.0e-39 166.4 242 44.6
Glyma.02G026000 Glycine max HOM05D007009 ORTHO05D008451 3.0e-39 166.4 238 42.9
Actinidia08196 Actinidia chinensis HOM05D007009 ORTHO05D008451 6.6e-39 165.2 267 44.2
Duzib251G0800 Durio zibethinus HOM05D007009 ORTHO05D008451 1.5e-38 164.1 247 45.3
Nn4g22971 Nelumbo nucifera HOM05D007009 ORTHO05D008451 1.5e-38 164.1 260 42.7
QL03p067658 Quercus lobata HOM05D007009 ORTHO05D008451 1.9e-38 163.7 235 43.0
Solyc05g006580.3 Solanum lycopersicum HOM05D007009 ORTHO05D008451 5.6e-38 162.2 182 50.0
TPR.G26720 Trifolium pratense HOM05D007009 ORTHO05D008451 7.3e-38 161.8 236 42.4
FAN17G0686 Fragaria x ananassa HOM05D007009 ORTHO05D008451 1.2e-37 161.0 230 43.0
Eucgr.B03385 Eucalyptus grandis HOM05D007009 ORTHO05D008451 2.8e-37 159.8 230 43.9
FAN07G0981 Fragaria x ananassa HOM05D007009 ORTHO05D008451 4.7e-37 159.1 230 42.6
FvH4_4g35380 Fragaria vesca HOM05D007009 ORTHO05D008451 8.0e-37 158.3 260 40.8
FAN12G0678 Fragaria x ananassa HOM05D007009 ORTHO05D008451 8.0e-37 158.3 260 40.8
Ca_15204_v3 Cicer arietinum L. HOM05D007009 ORTHO05D008451 1.8e-36 157.1 149 57.0
MELO3C012041.2 Cucumis melo HOM05D007009 ORTHO05D008451 4.0e-36 156.0 181 51.9
CiPaw.06G077800 Carya illinoinensis HOM05D007009 ORTHO05D008451 5.2e-36 155.6 230 43.5
Haze_12109 Corylus avellana HOM05D007009 ORTHO05D008451 5.2e-36 155.6 186 50.5
Cc11_g13910 Coffea canephora HOM05D007009 ORTHO05D008451 6.8e-36 155.2 179 50.3
PSO591G0441 Papaver somniferum HOM05D007009 ORTHO05D008451 6.8e-36 155.2 262 41.2
Hund25306 Selenicereus undatus HOM05D007009 ORTHO05D008451 6.8e-36 155.2 257 38.9
PSO832G0198 Papaver somniferum HOM05D007009 ORTHO05D008451 8.9e-36 154.8 262 40.8
Lj2g0006218 Lotus japonicus HOM05D007009 ORTHO05D008451 1.2e-35 154.5 153 52.9
FAN22G1672 Fragaria x ananassa HOM05D007009 ORTHO05D008451 1.5e-35 154.1 230 42.2
CANSAT01G1662 Cannabis sativa HOM05D007009 ORTHO05D008451 2.6e-35 153.3 264 40.2
CiPaw.05G143700 Carya illinoinensis HOM05D007009 ORTHO05D008451 2.6e-35 153.3 235 42.6
Lalb_Chr05g0217381 Lupinus albus HOM05D007009 ORTHO05D008451 3.4e-35 152.9 233 40.8
AUR62026539 Chenopodium quinoa HOM05D007009 ORTHO05D008451 1.7e-34 150.6 174 50.6
Thhalv10019139m.g Eutrema salsugineum HOM05D007009 ORTHO05D008451 8.3e-34 148.3 148 51.4
PGR102G0074 Punica granatum HOM05D007009 ORTHO05D008451 3.2e-33 146.4 227 41.9
Aqoxy3G03177 Aquilegia oxysepala HOM05D007009 ORTHO05D008451 5.4e-33 145.6 232 41.4
Ah.03g132140 Amaranthus hybridus HOM05D007009 ORTHO05D008451 7.1e-33 145.2 258 38.4
Hma1.2p1_0265F.1_g106360 Hydrangea macrophylla HOM05D007009 ORTHO05D008451 7.1e-33 145.2 256 39.8
Aa31LG4G10880 Aethionema arabicum HOM05D007009 ORTHO05D008451 1.2e-32 144.4 165 50.9
arahy.Tifrunner.gnm1.ann1.8B6YVA Arachis hypogaea HOM05D007009 ORTHO05D008451 1.2e-32 144.4 227 41.9
Psat2g116400 Pisum sativum HOM05D007009 ORTHO05D008451 1.6e-32 144.1 155 51.6
Sc11g0001470 Simmondsia chinensis HOM05D007009 ORTHO05D008451 2.7e-32 143.3 253 37.9
MD16G1083100 Malus domestica HOM05D007009 ORTHO05D008451 4.6e-32 142.5 255 42.0
Sp5g25090 Schrenkiella parvula HOM05D007009 ORTHO05D008451 6.0e-32 142.1 180 46.7
THA.LOC104808792 Tarenaya hassleriana HOM05D007009 ORTHO05D008451 7.8e-32 141.7 241 37.8
arahy.Tifrunner.gnm1.ann1.IMS4B0 Arachis hypogaea HOM05D007009 ORTHO05D008451 1.7e-31 140.6 227 41.0
Carub.0002s1666 Capsella rubella HOM05D007009 ORTHO05D008451 6.6e-31 138.7 152 52.6
Lj6A798T55 Lonicera japonica HOM05D007009 ORTHO05D008451 2.5e-30 136.7 142 52.8
C06p43850 Brassica napus HOM05D007009 ORTHO05D008451 3.3e-30 136.3 231 39.8
DCAR_026574 Daucus carota HOM05D007009 ORTHO05D008451 3.3e-30 136.3 175 44.6
MSTRG.7846 Avicennia marina HOM05D007009 ORTHO05D008451 7.3e-30 135.2 234 38.5
BcaB03g14776 Brassica carinata HOM05D007009 ORTHO05D008451 9.5e-30 134.8 229 39.7
EL10Ac6g13085 Beta vulgaris HOM05D007009 ORTHO05D008451 1.6e-29 134.0 165 50.3
SalBow2G0075 Salvia bowleyana HOM05D007009 ORTHO05D008451 2.8e-29 133.3 241 38.6
BolC6t39457H Brassica oleracea HOM05D007009 ORTHO05D008451 6.2e-29 132.1 261 38.3
AT1G69980 Arabidopsis thaliana HOM05D007009 ORTHO05D008451 1.4e-28 131.0 245 38.0
Migut.L01370 Erythranthe guttata HOM05D007009 ORTHO05D008451 1.4e-28 131.0 241 37.3
SGA_v2.0_scaffold166G38305 Striga asiatica HOM05D007009 ORTHO05D008451 1.8e-28 130.6 153 47.7
AL2G29220 Arabidopsis lyrata HOM05D007009 ORTHO05D008451 2.3e-28 130.2 157 49.7
BcaC08g46448 Brassica carinata HOM05D007009 ORTHO05D008451 5.8e-27 125.6 260 36.9
CARHR063080 Cardamine hirsuta HOM05D007009 ORTHO05D008451 2.2e-26 123.6 167 44.3
HanXRQChr08g0209091 Helianthus annuus HOM05D007009 ORTHO05D008451 2.4e-25 120.2 148 46.6
vmacro01210 Vaccinium macrocarpon HOM05D007009 ORTHO05D008451 2.7e-24 116.7 234 36.8
ECA233G5592 Erigeron canadensis HOM05D007009 ORTHO05D008451 7.8e-24 115.2 161 43.5
Phvul.002G078700 Phaseolus vulgaris HOM05D007009 ORTHO05D008451 7.8e-24 115.2 239 34.3
Rhsim12G0053000 Rhododendron simsii HOM05D007009 ORTHO05D008451 7.8e-24 115.2 148 48.0
Cpa.g.sc5.312 Carica papaya HOM05D007009 ORTHO05D008451 3.3e-22 109.8 193 41.5
Os09g0560400 Oryza sativa ssp. japonica HOM05D007009 ORTHO05D008451 5.6e-22 109.0 142 45.8
A07p36430 Brassica napus HOM05D007009 ORTHO05D008451 7.3e-22 108.6 221 35.7
unitig_8.g2944 Utricularia gibba HOM05D007009 ORTHO05D008451 7.3e-22 108.6 139 43.9
Lsat_1_v5_gn_8_161781 Lactuca sativa HOM05D007009 ORTHO05D008451 3.6e-21 106.3 137 40.9
Zm00001eb104690 Zea mays HOM05D007009 ORTHO05D008451 3.1e-20 103.2 143 45.5
BcaB03g14779 Brassica carinata HOM05D007009 ORTHO05D008451 6.6e-15 85.5 253 31.6
BolC8t48483H Brassica oleracea HOM05D007009 ORTHO05D008451 1.9e-14 84.0 90 46.7
MBI15_g31419_MAGBIO Magnolia biondii HOM05D007009 ORTHO05D008451 2.5e-14 83.6 104 49.0
AUR62039445 Chenopodium quinoa HOM05D007009 ORTHO05D008451 2.4e-12 77.0 108 46.3
Mapoly0049s0134 Marchantia polymorpha HOM05D007009 ORTHO05D008451 2.0e-11 73.9 175 32.6
CSS0007469 Camellia sinensis var. sinensis HOM05D007009 ORTHO05D008451 9.9e-11 71.6 82 48.8
BraA03t15512Z Brassica rapa HOM05D007009 ORTHO05D031827 9.3e-09 65.1 81 43.2
CDE10G1217 Ceratophyllum demersum HOM05D007009 ORTHO05D008451 4.6e-08 62.8 116 40.5
SEGI_38065 Sequoiadendron giganteum HOM05D007009 ORTHO05D008451 1.1e-06 58.2 123 34.1


User provided reference genes

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