Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0020700 Salix brachista HOM05D003288 ORTHO05D003734 2.3e-109 399.1 220 100.0
Sabra17G0111500 Salix brachista HOM05D003288 ORTHO05D003734 4.3e-92 341.7 216 89.4
Sabra17G0114500 Salix brachista HOM05D003288 ORTHO05D003734 7.4e-92 340.9 216 88.9
Sabra17G0111800 Salix brachista HOM05D003288 ORTHO05D003734 3.1e-90 335.5 216 88.4
Potri.017G137100 Populus trichocarpa HOM05D003288 ORTHO05D003734 1.6e-78 296.6 216 79.6
Sabra10G0020800 Salix brachista HOM05D003288 ORTHO05D003734 8.7e-69 264.2 190 83.2
Manes.02G079400 Manihot esculenta HOM05D003288 ORTHO05D003734 1.6e-67 260.0 213 68.5
Duzib268G1591 Durio zibethinus HOM05D003288 ORTHO05D003734 5.9e-65 251.5 216 66.7
MD09G1266100 Malus domestica HOM05D003288 ORTHO05D003734 1.0e-64 250.8 214 65.9
CANSAT64G0297 Cannabis sativa HOM05D003288 ORTHO05D003734 1.9e-63 246.5 216 62.5
Dinv28220 Davidia involucrata HOM05D003288 ORTHO05D003734 5.5e-63 245.0 216 62.0
QL01p032763 Quercus lobata HOM05D003288 ORTHO05D003734 2.1e-62 243.0 217 64.1
FAN09G4788 Fragaria x ananassa HOM05D003288 ORTHO05D003734 3.0e-61 239.2 216 63.0
Haze_14295 Corylus avellana HOM05D003288 ORTHO05D003734 3.9e-61 238.8 217 63.1
FAN05G3577 Fragaria x ananassa HOM05D003288 ORTHO05D003734 5.1e-61 238.4 216 63.0
SHI30119 Sapria himalayana HOM05D003288 ORTHO05D003734 6.7e-61 238.0 216 62.0
GSVIVG01030016001 Vitis vinifera HOM05D003288 ORTHO05D003734 6.7e-61 238.0 216 63.4
FAN02G3499 Fragaria x ananassa HOM05D003288 ORTHO05D003734 8.8e-61 237.7 216 62.5
Cfa007776 Carpinus fangiana HOM05D003288 ORTHO05D003734 2.0e-60 236.5 217 62.2
RcHm_v2.0_Chr2g0142951 Rosa chinensis HOM05D003288 ORTHO05D003734 2.0e-60 236.5 214 62.6
FvH4_6g33230 Fragaria vesca HOM05D003288 ORTHO05D003734 4.4e-60 235.3 214 62.6
FAN14G0969 Fragaria x ananassa HOM05D003288 ORTHO05D003734 4.4e-60 235.3 214 62.6
Lj7A364T81 Lonicera japonica HOM05D003288 ORTHO05D003734 4.4e-60 235.3 216 61.1
QL01p003767 Quercus lobata HOM05D003288 ORTHO05D003734 9.7e-60 234.2 217 61.8
Eucgr.F02892 Eucalyptus grandis HOM05D003288 ORTHO05D003734 1.7e-59 233.4 213 63.8
QL02p059844 Quercus lobata HOM05D003288 ORTHO05D003734 1.1e-58 230.7 217 62.7
vmacro23304 Vaccinium macrocarpon HOM05D003288 ORTHO05D003734 1.1e-58 230.7 223 60.1
Duzib138G1645 Durio zibethinus HOM05D003288 ORTHO05D003734 4.1e-58 228.8 216 59.7
Gohir.D12G148400 Gossypium hirsutum HOM05D003288 ORTHO05D003734 5.3e-58 228.4 201 63.2
arahy.Tifrunner.gnm1.ann1.BXR7J4 Arachis hypogaea HOM05D003288 ORTHO05D003734 1.5e-57 226.9 216 58.8
arahy.Tifrunner.gnm1.ann1.NZ46DJ Arachis hypogaea HOM05D003288 ORTHO05D003734 2.6e-57 226.1 216 58.8
Cpa.g.sc116.89 Carica papaya HOM05D003288 ORTHO05D003734 4.5e-57 225.3 216 60.2
QL09p034880 Quercus lobata HOM05D003288 ORTHO05D003734 1.3e-56 223.8 216 58.8
Rhsim12G0111000 Rhododendron simsii HOM05D003288 ORTHO05D003734 1.7e-56 223.4 216 59.3
Lj2g0015416 Lotus japonicus HOM05D003288 ORTHO05D003734 2.9e-56 222.6 214 60.3
TPR.G8950 Trifolium pratense HOM05D003288 ORTHO05D003734 2.9e-56 222.6 214 59.3
Prupe.3G163900 Prunus persica HOM05D003288 ORTHO05D003734 3.2e-55 219.2 197 62.9
Medtr2g063920 Medicago truncatula HOM05D003288 ORTHO05D003734 4.2e-55 218.8 214 57.9
CSS0016947 Camellia sinensis var. sinensis HOM05D003288 ORTHO05D003734 1.2e-54 217.2 213 60.1
PGSC0003DMG400000983 Solanum tuberosum HOM05D003288 ORTHO05D003734 2.7e-54 216.1 216 56.9
TAR629G1838 Trochodendron aralioides HOM05D003288 ORTHO05D003734 4.7e-54 215.3 219 57.1
Sopen11g002220 Solanum pennellii HOM05D003288 ORTHO05D003734 6.1e-54 214.9 216 56.9
Lalb_Chr05g0212271 Lupinus albus HOM05D003288 ORTHO05D003734 7.9e-54 214.5 224 54.5
Oeu009426.1 Olea europaea HOM05D003288 ORTHO05D003734 1.0e-53 214.2 216 57.4
Nn4g23260 Nelumbo nucifera HOM05D003288 ORTHO05D003734 3.0e-53 212.6 219 57.5
arahy.Tifrunner.gnm1.ann1.F6RFY9 Arachis hypogaea HOM05D003288 ORTHO05D003734 5.2e-53 211.8 214 55.1
arahy.Tifrunner.gnm1.ann1.G6QY2G Arachis hypogaea HOM05D003288 ORTHO05D003734 5.2e-53 211.8 214 55.1
CAN.G1256.15 Capsicum annuum HOM05D003288 ORTHO05D003734 6.7e-53 211.5 216 56.0
Solyc11g006310.2 Solanum lycopersicum HOM05D003288 ORTHO05D003734 1.1e-52 210.7 216 56.5
Lsat_1_v5_gn_4_26961 Lactuca sativa HOM05D003288 ORTHO05D003734 2.0e-52 209.9 216 55.1
Lj5g0021383 Lotus japonicus HOM05D003288 ORTHO05D003734 3.3e-52 209.1 208 59.6
SGA_v2.0_scaffold96G29122 Striga asiatica HOM05D003288 ORTHO05D003734 3.3e-52 209.1 216 56.9
Nn5g28678 Nelumbo nucifera HOM05D003288 ORTHO05D003734 7.4e-52 208.0 220 55.9
Nitab4.5_0002640g0060 Nicotiana tabacum HOM05D003288 ORTHO05D003734 7.4e-52 208.0 194 59.8
Peaxi162Scf00120g00813 Petunia axillaris HOM05D003288 ORTHO05D003734 1.3e-51 207.2 218 55.0
SalBow4G2398 Salvia bowleyana HOM05D003288 ORTHO05D003734 1.3e-51 207.2 216 56.9
Glyma.11G214200 Glycine max HOM05D003288 ORTHO05D003734 8.2e-51 204.5 207 55.6
VMungo1383G3441 Vigna mungo HOM05D003288 ORTHO05D003734 3.1e-50 202.6 214 54.7
Medtr2g063863 Medicago truncatula HOM05D003288 ORTHO05D003734 5.3e-50 201.8 210 55.7
Prupe.3G204300 Prunus persica HOM05D003288 ORTHO05D003734 9.1e-50 201.1 216 54.2
DCAR_004634 Daucus carota HOM05D003288 ORTHO05D003734 1.6e-49 200.3 214 52.3
Aa31LG2G2840 Aethionema arabicum HOM05D003288 ORTHO05D003734 5.9e-49 198.4 190 61.6
Medtr2g063823 Medicago truncatula HOM05D003288 ORTHO05D003734 7.7e-49 198.0 198 57.6
Cc02_g09200 Coffea canephora HOM05D003288 ORTHO05D003734 1.0e-48 197.6 206 57.8
BraA03t10702Z Brassica rapa HOM05D003288 ORTHO05D003734 1.3e-48 197.2 216 53.7
Aqoxy3G02762 Aquilegia oxysepala HOM05D003288 ORTHO05D003734 1.7e-48 196.8 219 54.8
unitig_748.g8456 Utricularia gibba HOM05D003288 ORTHO05D003734 1.7e-48 196.8 216 51.4
Sp6g17370 Schrenkiella parvula HOM05D003288 ORTHO05D003734 2.2e-48 196.4 216 52.8
CDE06G2565 Ceratophyllum demersum HOM05D003288 ORTHO05D003734 2.9e-48 196.1 221 52.5
PGR083G1244 Punica granatum HOM05D003288 ORTHO05D003734 2.9e-48 196.1 216 55.1
ECA240G3548 Erigeron canadensis HOM05D003288 ORTHO05D003734 3.8e-48 195.7 216 54.6
Glyma.05G018700 Glycine max HOM05D003288 ORTHO05D003734 5.0e-48 195.3 193 58.0
HanXRQChr13g0424601 Helianthus annuus HOM05D003288 ORTHO05D003734 5.0e-48 195.3 216 52.8
Medtr6g091980 Medicago truncatula HOM05D003288 ORTHO05D003734 6.5e-48 194.9 198 56.6
Phvul.001G228800 Phaseolus vulgaris HOM05D003288 ORTHO05D003734 8.5e-48 194.5 214 52.8
Haze_12714 Corylus avellana HOM05D003288 ORTHO05D003734 1.1e-47 194.1 216 54.2
Lsat_1_v5_gn_3_104940 Lactuca sativa HOM05D003288 ORTHO05D003734 1.1e-47 194.1 216 53.7
VMungo0331G0333 Vigna mungo HOM05D003288 ORTHO05D003734 1.5e-47 193.7 214 52.8
Migut.A00479 Erythranthe guttata HOM05D003288 ORTHO05D003734 5.5e-47 191.8 200 56.5
Psat1g016080 Pisum sativum HOM05D003288 ORTHO05D003734 3.6e-46 189.1 198 56.1
RcHm_v2.0_Chr2g0139401 Rosa chinensis HOM05D003288 ORTHO05D003734 6.1e-46 188.3 176 61.4
Lalb_Chr15g0085041 Lupinus albus HOM05D003288 ORTHO05D003734 3.0e-45 186.0 167 61.1
PSO210G3953 Papaver somniferum HOM05D003288 ORTHO05D003734 6.7e-45 184.9 201 55.7
HPP92_013124 Vanilla planifolia HOM05D003288 ORTHO05D003734 8.8e-45 184.5 211 51.7
MELO3C017972.2 Cucumis melo HOM05D003288 ORTHO05D003734 1.5e-44 183.7 216 50.9
CsaV3_4G000640 Cucumis sativus L. HOM05D003288 ORTHO05D003734 1.5e-44 183.7 216 50.5
Os09g0442400 Oryza sativa ssp. japonica HOM05D003288 ORTHO05D003734 1.5e-44 183.7 219 48.4
MBI13_g04499_MAGBIO Magnolia biondii HOM05D003288 ORTHO05D003734 2.0e-44 183.3 219 51.6
Rhsim10G0182400 Rhododendron simsii HOM05D003288 ORTHO05D003734 2.0e-44 183.3 197 55.3
Ciclev10011340m.g Citrus clementina HOM05D003288 ORTHO05D003734 2.6e-44 183.0 216 52.3
HanXRQChr03g0092541 Helianthus annuus HOM05D003288 ORTHO05D003734 2.6e-44 183.0 216 51.4
AL8G31020 Arabidopsis lyrata HOM05D003288 ORTHO05D003734 5.7e-44 181.8 216 52.3
Oeu048956.1 Olea europaea HOM05D003288 ORTHO05D003734 5.7e-44 181.8 217 51.2
DCAR_030537 Daucus carota HOM05D003288 ORTHO05D003734 1.3e-43 180.6 214 48.6
MBI13_g04500_MAGBIO Magnolia biondii HOM05D003288 ORTHO05D003734 1.3e-43 180.6 219 51.1
Aqoxy2G03361 Aquilegia oxysepala HOM05D003288 ORTHO05D003734 2.2e-43 179.9 246 48.8
TAR629G0745 Trochodendron aralioides HOM05D003288 ORTHO05D003734 2.8e-43 179.5 219 50.7
EL10As8g23882 Beta vulgaris HOM05D003288 ORTHO05D003734 3.7e-43 179.1 216 50.0
Lj2C515T4 Lonicera japonica HOM05D003288 ORTHO05D003734 4.8e-43 178.7 183 56.3
Medtr2g093230 Medicago truncatula HOM05D003288 ORTHO05D003734 8.2e-43 177.9 215 51.2
THA.LOC104805978 Tarenaya hassleriana HOM05D003288 ORTHO05D003734 1.1e-42 177.6 195 55.9
AUR62035243 Chenopodium quinoa HOM05D003288 ORTHO05D003734 1.4e-42 177.2 216 48.6
ECA238G4239 Erigeron canadensis HOM05D003288 ORTHO05D003734 1.4e-42 177.2 216 48.6
Glyma.17G081050 Glycine max HOM05D003288 ORTHO05D003734 5.3e-42 175.3 205 50.7
AUR62004111 Chenopodium quinoa HOM05D003288 ORTHO05D003734 7.0e-42 174.9 216 49.1
ATR0598G225 Amborella trichopoda HOM05D003288 ORTHO05D003734 9.1e-42 174.5 219 49.3
AUR62007625 Chenopodium quinoa HOM05D003288 ORTHO05D003734 1.2e-41 174.1 216 48.6
SGA_v2.0_scaffold79G25577 Striga asiatica HOM05D003288 ORTHO05D003734 1.6e-41 173.7 167 59.9
ClCG10G010670 Citrullus lanatus HOM05D003288 ORTHO05D003734 2.0e-41 173.3 222 49.5
Thecc.04G002200 Theobroma cacao HOM05D003288 ORTHO05D003734 2.7e-41 172.9 205 51.7
Peaxi162Scf00039g01122 Petunia axillaris HOM05D003288 ORTHO05D003734 1.0e-40 171.0 216 50.0
MD17G1110600 Malus domestica HOM05D003288 ORTHO05D003734 2.2e-40 169.9 216 48.6
CDE07G0160 Ceratophyllum demersum HOM05D003288 ORTHO05D003734 2.9e-40 169.5 215 48.8
Thhalv10015474m.g Eutrema salsugineum HOM05D003288 ORTHO05D003734 2.9e-40 169.5 216 50.9
HanXRQChr03g0092531 Helianthus annuus HOM05D003288 ORTHO05D003734 2.9e-40 169.5 216 49.1
PSO210G3300 Papaver somniferum HOM05D003288 ORTHO05D003734 2.9e-40 169.5 193 53.9
TWI74G0189 Tripterygium wilfordii HOM05D003288 ORTHO05D003734 6.5e-40 168.3 216 50.0
AT5G55490 Arabidopsis thaliana HOM05D003288 ORTHO05D003734 5.5e-39 165.2 167 57.5
Sc18g0007110 Simmondsia chinensis HOM05D003288 ORTHO05D003734 5.5e-39 165.2 219 44.7
Carub.0008s1584 Capsella rubella HOM05D003288 ORTHO05D003734 9.4e-39 164.5 171 55.6
Sed0014607 Sechium edule HOM05D003288 ORTHO05D003734 1.6e-38 163.7 221 48.0
FAN02G4572 Fragaria x ananassa HOM05D003288 ORTHO05D003734 2.1e-38 163.3 211 48.3
Gohir.A12G143700 Gossypium hirsutum HOM05D003288 ORTHO05D003734 1.4e-37 160.6 228 45.6
Lsat_1_v5_gn_3_125960 Lactuca sativa HOM05D003288 ORTHO05D003734 1.4e-37 160.6 187 53.5
DCAR_014148 Daucus carota HOM05D003288 ORTHO05D003734 4.0e-37 159.1 216 45.8
ECA234G0526 Erigeron canadensis HOM05D003288 ORTHO05D003734 4.0e-37 159.1 188 50.0
Thecc.04G002400 Theobroma cacao HOM05D003288 ORTHO05D003734 5.2e-37 158.7 216 47.2
AUR62017809 Chenopodium quinoa HOM05D003288 ORTHO05D003734 6.8e-37 158.3 213 46.5
CAN.G582.21 Capsicum annuum HOM05D003288 ORTHO05D003734 1.2e-36 157.5 212 48.6
RcHm_v2.0_Chr2g0157531 Rosa chinensis HOM05D003288 ORTHO05D003734 1.2e-36 157.5 188 50.0
Glyma.18G042400 Glycine max HOM05D003288 ORTHO05D003734 2.0e-36 156.8 163 54.6
A03p14030 Brassica napus HOM05D003288 ORTHO05D003734 3.4e-36 156.0 216 47.7
Psat0s1991g0080 Pisum sativum HOM05D003288 ORTHO05D003734 3.4e-36 156.0 190 51.1
CSS0049339 Camellia sinensis var. sinensis HOM05D003288 ORTHO05D003734 5.7e-36 155.2 206 49.0
EL10Ac6g15379 Beta vulgaris HOM05D003288 ORTHO05D003734 7.5e-36 154.8 216 45.8
BcaC01g06370 Brassica carinata HOM05D003288 ORTHO05D003734 1.3e-35 154.1 216 47.2
C03p16470 Brassica napus HOM05D003288 ORTHO05D003734 1.3e-35 154.1 216 47.2
BolC3t14067H Brassica oleracea HOM05D003288 ORTHO05D003734 1.3e-35 154.1 216 47.2
Zm00001eb314230 Zea mays HOM05D003288 ORTHO05D003734 1.4e-34 150.6 219 43.8
EL10Ac6g15375 Beta vulgaris HOM05D003288 ORTHO05D003734 2.0e-33 146.7 216 44.9
AUR62003503 Chenopodium quinoa HOM05D003288 ORTHO05D003734 2.7e-33 146.4 213 45.5
Hma1.2p1_1386F.1_g279840 Hydrangea macrophylla HOM05D003288 ORTHO05D003734 7.7e-33 144.8 168 53.6
COL.COLO4_06958 Corchorus olitorius HOM05D003288 ORTHO05D003734 1.3e-32 144.1 216 44.4
Actinidia17186 Actinidia chinensis HOM05D003288 ORTHO05D003734 1.5e-31 140.6 181 49.7
Atru.chr6.3343 Acer truncatum HOM05D003288 ORTHO05D003734 1.8e-29 133.7 180 46.1
Nitab4.5_0001781g0030 Nicotiana tabacum HOM05D003288 ORTHO05D003734 5.2e-29 132.1 135 54.8
BcaB08g35905 Brassica carinata HOM05D003288 ORTHO05D003734 1.5e-28 130.6 216 41.7
Hund06476 Selenicereus undatus HOM05D003288 ORTHO05D003734 3.7e-27 125.9 155 48.4
TPR.G37900 Trifolium pratense HOM05D003288 ORTHO05D003734 4.9e-27 125.6 167 44.3
BcaNung05847 Brassica carinata HOM05D003288 ORTHO05D003734 2.7e-25 119.8 216 40.3
C09p46140 Brassica napus HOM05D003288 ORTHO05D003734 2.7e-25 119.8 216 40.3
BolC9t57480H Brassica oleracea HOM05D003288 ORTHO05D003734 2.7e-25 119.8 216 40.3
A10p12610 Brassica napus HOM05D003288 ORTHO05D003734 3.5e-25 119.4 216 39.8
SEGI_20345 Sequoiadendron giganteum HOM05D003288 ORTHO05D003734 3.5e-25 119.4 219 39.7
PSO210G4855 Papaver somniferum HOM05D003288 ORTHO05D003734 1.0e-24 117.9 177 44.6
BraA10t43361Z Brassica rapa HOM05D003288 ORTHO05D003734 1.3e-24 117.5 216 39.4
FvH4_6g41730 Fragaria vesca HOM05D003288 ORTHO05D003734 1.3e-24 117.5 224 38.4
AUR62023637 Chenopodium quinoa HOM05D003288 ORTHO05D003734 1.5e-23 114.0 142 49.3
CARHR268800 Cardamine hirsuta HOM05D003288 ORTHO05D003734 9.5e-23 111.3 196 42.3
CDE04G3315 Ceratophyllum demersum HOM05D003288 ORTHO05D003734 1.2e-22 110.9 94 66.0
FAN14G3219 Fragaria x ananassa HOM05D003288 ORTHO05D003734 2.1e-22 110.2 221 36.2
THA.LOC104805982 Tarenaya hassleriana HOM05D003288 ORTHO05D003734 2.8e-22 109.8 97 60.8
Gorai.008G159700 Gossypium raimondii HOM05D003288 ORTHO05D003734 1.0e-21 107.8 97 63.9
THA.LOC109115998 Tarenaya hassleriana HOM05D003288 ORTHO05D003734 1.4e-21 107.5 84 70.2
FAN09G0442 Fragaria x ananassa HOM05D003288 ORTHO05D003734 6.8e-21 105.1 87 67.8
MELO3C019571.2 Cucumis melo HOM05D003288 ORTHO05D003734 1.7e-19 100.5 99 58.6
Pp3c8_19560 Physcomitrium patens HOM05D003288 ORTHO05D003734 9.2e-18 94.7 198 37.9
Atru.chr7.1988 Acer truncatum HOM05D003288 ORTHO05D003734 1.2e-17 94.4 145 43.4
TAR623G0700 Trochodendron aralioides HOM05D003288 ORTHO05D003734 3.0e-16 89.7 62 75.8
ECA240G0593 Erigeron canadensis HOM05D003288 ORTHO05D003734 5.0e-16 89.0 196 33.7
VMungo0331G0214 Vigna mungo HOM05D003288 ORTHO05D003734 1.1e-15 87.8 78 62.8
FAN09G2221 Fragaria x ananassa HOM05D003288 ORTHO05D003734 2.1e-14 83.6 116 49.1
Ah.02g124870 Amaranthus hybridus HOM05D003288 ORTHO05D003734 1.4e-13 80.9 150 38.7
Dinv19061 Davidia involucrata HOM05D003288 ORTHO05D003734 2.3e-13 80.1 62 67.7
HanXRQChr09g0261651 Helianthus annuus HOM05D003288 ORTHO05D003734 8.9e-13 78.2 76 55.3
Ca_03338_v3 Cicer arietinum L. HOM05D003288 ORTHO05D003734 1.3e-11 74.3 60 66.7
MD09G1119800 Malus domestica HOM05D003288 ORTHO05D003734 2.2e-11 73.6 94 47.9
VMungo0331G0952 Vigna mungo HOM05D003288 ORTHO05D003734 8.3e-11 71.6 60 66.7
Mapoly0046s0117 Marchantia polymorpha HOM05D003288 ORTHO05D003734 2.4e-10 70.1 230 31.3
Psat0s1991g0040 Pisum sativum HOM05D003288 ORTHO05D003734 9.2e-10 68.2 104 47.1
CSS0043791 Camellia sinensis var. sinensis HOM05D003288 ORTHO05D003734 1.3e-08 64.3 49 69.4
Os07g0668100 Oryza sativa ssp. japonica HOM05D003288 ORTHO05D003734 9.5e-07 58.2 58 51.7


User provided reference genes

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