Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra09G0126500 Salix brachista HOM05D006311 ORTHO05D007732 8.2e-98 360.5 202 100.0
Potri.009G161800 Populus trichocarpa HOM05D006311 ORTHO05D007732 2.4e-89 332.4 203 93.1
Cfa009969 Carpinus fangiana HOM05D006311 ORTHO05D007732 6.4e-66 254.6 197 72.1
Medtr4g052010 Medicago truncatula HOM05D006311 ORTHO05D007732 2.4e-65 252.7 185 76.2
RcHm_v2.0_Chr5g0047271 Rosa chinensis HOM05D006311 ORTHO05D007732 2.4e-65 252.7 200 74.5
QL01p011627 Quercus lobata HOM05D006311 ORTHO05D007732 3.2e-65 252.3 203 73.9
CSS0008256 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 2.7e-64 249.2 187 75.4
CSS0012591 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 2.7e-64 249.2 187 75.4
Cpa.g.sc195.39 Carica papaya HOM05D006311 ORTHO05D007732 2.7e-64 249.2 199 71.4
CiPaw.13G131700 Carya illinoinensis HOM05D006311 ORTHO05D007732 3.5e-64 248.8 187 78.1
QL01p011364 Quercus lobata HOM05D006311 ORTHO05D007732 6.0e-64 248.1 203 70.9
MD11G1172600 Malus domestica HOM05D006311 ORTHO05D007732 3.0e-63 245.7 188 72.9
FvH4_3g25980 Fragaria vesca HOM05D006311 ORTHO05D007732 6.6e-63 244.6 187 73.3
FAN11G0814 Fragaria x ananassa HOM05D006311 ORTHO05D007732 6.6e-63 244.6 187 73.3
COL.COLO4_22654 Corchorus olitorius HOM05D006311 ORTHO05D007732 8.6e-63 244.2 198 74.7
Dinv05953 Davidia involucrata HOM05D006311 ORTHO05D007732 8.6e-63 244.2 186 73.7
Glyma.11G180200 Glycine max HOM05D006311 ORTHO05D007732 8.6e-63 244.2 190 71.6
Gohir.A09G097700 Gossypium hirsutum HOM05D006311 ORTHO05D007732 8.6e-63 244.2 196 70.9
Gorai.006G114200 Gossypium raimondii HOM05D006311 ORTHO05D007732 8.6e-63 244.2 196 70.9
FAN16G2986 Fragaria x ananassa HOM05D006311 ORTHO05D007732 1.5e-62 243.4 187 74.9
TWI31G0202 Tripterygium wilfordii HOM05D006311 ORTHO05D007732 1.5e-62 243.4 195 73.3
FAN25G1023 Fragaria x ananassa HOM05D006311 ORTHO05D007732 2.5e-62 242.7 187 72.2
Gohir.D09G097500 Gossypium hirsutum HOM05D006311 ORTHO05D007732 3.3e-62 242.3 196 71.4
FAN21G2836 Fragaria x ananassa HOM05D006311 ORTHO05D007732 4.3e-62 241.9 187 74.3
Glyma.12G093300 Glycine max HOM05D006311 ORTHO05D007732 7.3e-62 241.1 190 72.1
Ciclev10029330m.g Citrus clementina HOM05D006311 ORTHO05D007732 9.5e-62 240.7 199 68.8
Psat7g187040 Pisum sativum HOM05D006311 ORTHO05D007732 9.5e-62 240.7 185 73.0
Manes.11G165200 Manihot esculenta HOM05D006311 ORTHO05D007732 2.8e-61 239.2 188 71.3
TPR.G4615 Trifolium pratense HOM05D006311 ORTHO05D007732 1.1e-60 237.3 190 72.6
Actinidia07269 Actinidia chinensis HOM05D006311 ORTHO05D007732 1.4e-60 236.9 165 81.8
Oeu048845.1 Olea europaea HOM05D006311 ORTHO05D007732 1.8e-60 236.5 200 67.5
Sed0028181 Sechium edule HOM05D006311 ORTHO05D007732 2.3e-60 236.1 166 77.7
GSVIVG01036060001 Vitis vinifera HOM05D006311 ORTHO05D007732 3.1e-60 235.7 188 71.3
MSTRG.21022 Avicennia marina HOM05D006311 ORTHO05D007732 6.8e-60 234.6 203 68.0
Thecc.09G276000 Theobroma cacao HOM05D006311 ORTHO05D007732 6.8e-60 234.6 197 69.0
Nitab4.5_0000893g0010 Nicotiana tabacum HOM05D006311 ORTHO05D007732 8.9e-60 234.2 165 78.2
VMungo1127G2206 Vigna mungo HOM05D006311 ORTHO05D007732 8.9e-60 234.2 185 70.3
Rhsim01G0202100 Rhododendron simsii HOM05D006311 ORTHO05D007732 1.2e-59 233.8 187 72.7
CAN.G745.31 Capsicum annuum HOM05D006311 ORTHO05D007732 2.0e-59 233.0 163 78.5
ClCG02G022370 Citrullus lanatus HOM05D006311 ORTHO05D007732 2.0e-59 233.0 165 77.6
Migut.D02415 Erythranthe guttata HOM05D006311 ORTHO05D007732 2.6e-59 232.6 167 76.6
vmacro14327 Vaccinium macrocarpon HOM05D006311 ORTHO05D007732 2.6e-59 232.6 188 76.1
Nitab4.5_0001135g0160 Nicotiana tabacum HOM05D006311 ORTHO05D007732 3.4e-59 232.3 164 75.6
Peaxi162Scf00224g00818 Petunia axillaris HOM05D006311 ORTHO05D007732 3.4e-59 232.3 163 77.9
Atru.chr3.3143 Acer truncatum HOM05D006311 ORTHO05D007732 9.8e-59 230.7 203 67.0
Cc01_g08620 Coffea canephora HOM05D006311 ORTHO05D007732 2.2e-58 229.6 185 71.4
PGR119G0707 Punica granatum HOM05D006311 ORTHO05D007732 2.9e-58 229.2 201 68.2
Lalb_Chr01g0004961 Lupinus albus HOM05D006311 ORTHO05D007732 3.7e-58 228.8 185 70.3
PGSC0003DMG400019619 Solanum tuberosum HOM05D006311 ORTHO05D007732 4.9e-58 228.4 164 75.0
Lalb_Chr03g0028331 Lupinus albus HOM05D006311 ORTHO05D007732 6.4e-58 228.0 196 68.4
Sc21g0006890 Simmondsia chinensis HOM05D006311 ORTHO05D007732 6.4e-58 228.0 161 75.2
Sopen11g027510 Solanum pennellii HOM05D006311 ORTHO05D007732 6.4e-58 228.0 164 74.4
Eucgr.J00538 Eucalyptus grandis HOM05D006311 ORTHO05D007732 3.2e-57 225.7 166 75.3
Duzib150G1639 Durio zibethinus HOM05D006311 ORTHO05D007732 7.1e-57 224.6 149 83.2
Solyc11g068790.2 Solanum lycopersicum HOM05D006311 ORTHO05D007732 7.1e-57 224.6 164 74.4
Phvul.011G097600 Phaseolus vulgaris HOM05D006311 ORTHO05D007732 9.2e-57 224.2 185 67.0
Ca_29924_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 1.6e-56 223.4 189 69.3
MELO3C014513.2 Cucumis melo HOM05D006311 ORTHO05D007732 1.6e-56 223.4 165 77.0
CsaV3_6G038500 Cucumis sativus L. HOM05D006311 ORTHO05D007732 2.1e-56 223.0 165 77.0
DCAR_010317 Daucus carota HOM05D006311 ORTHO05D007732 2.7e-56 222.6 191 66.0
TAR623G0571 Trochodendron aralioides HOM05D006311 ORTHO05D007732 3.5e-56 222.2 188 67.6
SalBow6G1677 Salvia bowleyana HOM05D006311 ORTHO05D007732 6.0e-56 221.5 196 65.8
AUR62001536 Chenopodium quinoa HOM05D006311 ORTHO05D007732 1.0e-55 220.7 170 70.6
Lj3g0006801 Lotus japonicus HOM05D006311 ORTHO05D007732 1.0e-55 220.7 191 68.1
SGA_v2.0_scaffold7G03983 Striga asiatica HOM05D006311 ORTHO05D007732 1.3e-55 220.3 200 66.5
arahy.Tifrunner.gnm1.ann1.INBK63 Arachis hypogaea HOM05D006311 ORTHO05D007732 1.7e-55 219.9 196 67.9
CANSAT54G0913 Cannabis sativa HOM05D006311 ORTHO05D007732 2.3e-55 219.5 167 74.9
MSTRG.18783 Avicennia marina HOM05D006311 ORTHO05D007732 3.0e-55 219.2 162 73.5
arahy.Tifrunner.gnm1.ann1.HB0RZJ Arachis hypogaea HOM05D006311 ORTHO05D007732 3.9e-55 218.8 196 67.3
Ca_19458_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 8.6e-55 217.6 155 78.7
HanXRQChr14g0433141 Helianthus annuus HOM05D006311 ORTHO05D007732 8.6e-55 217.6 156 76.3
MBI17_g18935_MAGBIO Magnolia biondii HOM05D006311 ORTHO05D007732 1.9e-54 216.5 161 76.4
CARHR119830 Cardamine hirsuta HOM05D006311 ORTHO05D007732 3.3e-54 215.7 162 71.6
Carub.0004s0790 Capsella rubella HOM05D006311 ORTHO05D007732 5.6e-54 214.9 194 64.9
AUR62020246 Chenopodium quinoa HOM05D006311 ORTHO05D007732 5.6e-54 214.9 172 68.6
Nn2g14263 Nelumbo nucifera HOM05D006311 ORTHO05D007732 5.6e-54 214.9 187 66.3
Aqoxy4G02682 Aquilegia oxysepala HOM05D006311 ORTHO05D007732 9.5e-54 214.2 186 70.4
Sp4g10100 Schrenkiella parvula HOM05D006311 ORTHO05D007732 1.6e-53 213.4 165 72.7
THA.LOC104826442 Tarenaya hassleriana HOM05D006311 ORTHO05D007732 2.1e-53 213.0 190 68.4
AL4G21210 Arabidopsis lyrata HOM05D006311 ORTHO05D007732 2.8e-53 212.6 166 75.3
BcaB06g28142 Brassica carinata HOM05D006311 ORTHO05D007732 2.8e-53 212.6 165 71.5
Lsat_1_v5_gn_2_35940 Lactuca sativa HOM05D006311 ORTHO05D007732 2.8e-53 212.6 154 76.0
C04p56680 Brassica napus HOM05D006311 ORTHO05D007732 6.2e-53 211.5 165 70.9
BolC4t27194H Brassica oleracea HOM05D006311 ORTHO05D007732 6.2e-53 211.5 194 64.9
BolC4t27200H Brassica oleracea HOM05D006311 ORTHO05D007732 6.2e-53 211.5 165 70.9
BcaB06g28139 Brassica carinata HOM05D006311 ORTHO05D007732 1.4e-52 210.3 171 70.8
Thhalv10002100m.g Eutrema salsugineum HOM05D006311 ORTHO05D007732 1.4e-52 210.3 169 74.6
Aa31LG5G8700 Aethionema arabicum HOM05D006311 ORTHO05D007732 1.8e-52 209.9 163 72.4
PSO384G4643 Papaver somniferum HOM05D006311 ORTHO05D007732 1.8e-52 209.9 187 66.8
Hund20941 Selenicereus undatus HOM05D006311 ORTHO05D007732 4.0e-52 208.8 170 75.9
BcaB01g03062 Brassica carinata HOM05D006311 ORTHO05D007732 5.2e-52 208.4 161 72.0
BcaB01g03063 Brassica carinata HOM05D006311 ORTHO05D007732 5.2e-52 208.4 161 72.0
A04p20870 Brassica napus HOM05D006311 ORTHO05D007732 8.9e-52 207.6 199 61.8
BraA04t17659Z Brassica rapa HOM05D001305 ORTHO05D007732 1.2e-51 207.2 173 67.6
unitig_0.g1470 Utricularia gibba HOM05D006311 ORTHO05D007732 1.2e-51 207.2 154 73.4
AT2G27290 Arabidopsis thaliana HOM05D006311 ORTHO05D007732 2.0e-51 206.5 203 63.5
ECA238G1364 Erigeron canadensis HOM05D006311 ORTHO05D007732 2.0e-51 206.5 129 84.5
PSO339G0926 Papaver somniferum HOM05D006311 ORTHO05D007732 7.6e-51 204.5 187 65.2
HPP92_023073 Vanilla planifolia HOM05D006311 ORTHO05D007732 6.4e-50 201.4 156 73.1
EL10Ac7g16320 Beta vulgaris HOM05D006311 ORTHO05D007732 1.1e-49 200.7 155 72.3
Prupe.6G139600 Prunus persica HOM05D006311 ORTHO05D007732 5.4e-49 198.4 189 63.5
SEGI_25108 Sequoiadendron giganteum HOM05D006311 ORTHO05D007732 6.0e-48 194.9 131 78.6
Os04g0416000 Oryza sativa ssp. japonica HOM05D006311 ORTHO05D007732 1.7e-47 193.4 125 80.0
Haze_23330 Corylus avellana HOM05D006311 ORTHO05D007732 1.9e-46 189.9 118 84.7
Mapoly0006s0182 Marchantia polymorpha HOM05D006311 ORTHO05D007732 2.5e-46 189.5 197 58.9
CBR_g30935 Chara braunii HOM05D006311 ORTHO05D007732 1.2e-45 187.2 172 58.7
Lj1A261G25 Lonicera japonica HOM05D006311 ORTHO05D007732 3.6e-45 185.7 117 87.2
CDE02G3359 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 6.2e-45 184.9 118 81.4
SGA_v2.0_scaffold114G31957 Striga asiatica HOM05D006311 ORTHO05D007732 6.2e-45 184.9 116 83.6
ATR0772G022 Amborella trichopoda HOM05D006311 ORTHO05D007732 8.1e-45 184.5 198 56.6
Pp3c14_19090 Physcomitrium patens HOM05D006311 ORTHO05D007732 8.9e-44 181.0 128 73.4
SMO146G0331 Selaginella moellendorffii HOM05D006311 ORTHO05D007732 6.4e-42 174.9 126 75.4
MD03G1152600 Malus domestica HOM05D006311 ORTHO05D007732 2.7e-40 169.5 109 83.5
AagrBONN_evm.TU.Sc2ySwM_117.22 Anthoceros agrestis HOM05D006311 ORTHO05D007732 3.0e-39 166.0 158 58.2
MCO12G429 Micromonas commoda HOM05D006311 ORTHO05D007732 2.5e-38 162.9 125 66.4
Gohir.D07G115550 Gossypium hirsutum HOM05D006311 ORTHO05D007732 1.2e-32 144.1 86 89.5
Gohir.A07G112050 Gossypium hirsutum HOM05D006311 ORTHO05D007732 1.6e-32 143.7 91 86.8
Gorai.001G123800 Gossypium raimondii HOM05D006311 ORTHO05D007732 4.6e-32 142.1 86 88.4
PRCOL_00001321 Prasinoderma coloniale HOM05D006311 ORTHO05D007732 1.7e-31 140.2 130 60.8
Cre12.g485850 Chlamydomonas reinhardtii HOM05D006311 ORTHO05D007732 3.0e-31 139.4 129 55.8
BcaC02g08251 Brassica carinata HOM05D006311 ORTHO05D007732 7.3e-30 134.8 125 64.0
BcaC02g08253 Brassica carinata HOM05D006311 ORTHO05D007732 3.4e-27 125.9 170 50.6
Actinidia24237 Actinidia chinensis HOM05D006311 ORTHO05D007732 7.6e-27 124.8 131 58.8
BraA04t17657Z Brassica rapa HOM05D006311 ORTHO05D007732 2.9e-26 122.9 86 76.7
Oeu009055.1 Olea europaea HOM05D000182 ORTHO05D000112 1.6e-24 117.1 92 70.7
A04p20840 Brassica napus HOM05D006311 ORTHO05D007732 5.1e-23 112.1 78 76.9
Zm00001eb422070 Zea mays HOM05D006311 ORTHO05D007732 9.0e-20 101.3 123 54.5
CDE08G1250 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 3.2e-17 92.8 57 75.4
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 1.8e-07 60.5 105 35.2


User provided reference genes

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