Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra09G0123900 Salix brachista HOM05D001813 ORTHO05D349462 7.6e-68 260.4 132 100.0
Potri.004G196200 Populus trichocarpa HOM05D001813 ORTHO05D008124 6.3e-14 81.3 155 43.9
Sabra04G0133000 Salix brachista HOM05D001813 ORTHO05D008124 8.2e-14 80.9 109 53.2
Manes.04G055488 Manihot esculenta HOM05D001813 ORTHO05D008124 9.1e-13 77.4 110 53.6
Dinv05236 Davidia involucrata HOM05D001813 ORTHO05D008124 2.6e-12 75.9 109 45.9
Nitab4.5_0009952g0030 Nicotiana tabacum HOM05D001813 ORTHO05D008124 6.5e-11 71.2 94 52.1
Atru.chr3.2923 Acer truncatum HOM05D001813 ORTHO05D008124 2.7e-09 65.9 109 43.1
CAN.G280.22 Capsicum annuum HOM05D001813 ORTHO05D008124 4.7e-09 65.1 58 62.1
CiPaw.13G120200 Carya illinoinensis HOM05D001813 ORTHO05D008124 4.7e-09 65.1 108 45.4
Aa31LG1G13710 Aethionema arabicum HOM05D001813 ORTHO05D008124 6.1e-09 64.7 153 36.6
Lj2A924G26 Lonicera japonica HOM05D001813 ORTHO05D008124 8.0e-09 64.3 115 40.9
Lj2C922G2 Lonicera japonica HOM05D001813 ORTHO05D008124 8.0e-09 64.3 115 40.9
PGR119G1182 Punica granatum HOM05D001813 ORTHO05D008124 1.0e-08 63.9 153 35.9
MD11G1179300 Malus domestica HOM05D001813 ORTHO05D008124 1.8e-08 63.2 153 35.9
Prupe.5G009800 Prunus persica HOM05D001813 ORTHO05D008124 2.3e-08 62.8 152 35.5
Haze_23659 Corylus avellana HOM05D001813 ORTHO05D008124 3.0e-08 62.4 105 46.7
Gohir.A03G035300 Gossypium hirsutum HOM05D001813 ORTHO05D008124 4.0e-08 62.0 154 34.4
Gohir.D03G132900 Gossypium hirsutum HOM05D001813 ORTHO05D008124 4.0e-08 62.0 154 34.4
Gorai.003G140000 Gossypium raimondii HOM05D001813 ORTHO05D008124 4.0e-08 62.0 154 34.4
TAR623G0200 Trochodendron aralioides HOM05D001813 ORTHO05D008124 4.0e-08 62.0 108 41.7
Cpa.g.sc103.70 Carica papaya HOM05D001813 ORTHO05D008124 5.2e-08 61.6 153 32.7
CSS0030952 Camellia sinensis var. sinensis HOM05D001813 ORTHO05D008124 6.7e-08 61.2 108 40.7
FAN21G3701 Fragaria x ananassa HOM05D001813 ORTHO05D008124 6.7e-08 61.2 107 41.1
MSTRG.17658 Avicennia marina HOM05D001813 ORTHO05D008124 1.2e-07 60.5 62 56.5
TWI31G1397 Tripterygium wilfordii HOM05D001813 ORTHO05D008124 1.2e-07 60.5 62 54.8
HanXRQChr03g0084001 Helianthus annuus HOM05D001813 ORTHO05D008124 1.5e-07 60.1 105 39.0
Actinidia07014 Actinidia chinensis HOM05D001813 ORTHO05D008124 2.0e-07 59.7 109 38.5
THA.LOC104810965 Tarenaya hassleriana HOM05D001813 ORTHO05D008124 2.6e-07 59.3 105 41.9
Duzib168G1187 Durio zibethinus HOM05D001813 ORTHO05D008124 3.3e-07 58.9 154 35.1
Sed0003336 Sechium edule HOM05D001813 ORTHO05D008124 3.3e-07 58.9 108 39.8
FAN16G2170 Fragaria x ananassa HOM05D001813 ORTHO05D008124 4.4e-07 58.5 107 40.2
A10p19010 Brassica napus HOM05D001813 ORTHO05D008124 5.7e-07 58.2 156 33.3
Nn7g37283 Nelumbo nucifera HOM05D001813 ORTHO05D008124 5.7e-07 58.2 110 40.0
RcHm_v2.0_Chr5g0049661 Rosa chinensis HOM05D001813 ORTHO05D008124 5.7e-07 58.2 108 41.7
BraA10t43979Z Brassica rapa HOM05D001813 ORTHO05D008124 7.5e-07 57.8 156 33.3
QL01p020357 Quercus lobata HOM05D001813 ORTHO05D008124 7.5e-07 57.8 110 39.1
Thecc.09G336900 Theobroma cacao HOM05D001813 ORTHO05D008124 7.5e-07 57.8 154 34.4
FAN25G0391 Fragaria x ananassa HOM05D001813 ORTHO05D008124 9.7e-07 57.4 107 39.3
HPP92_018006 Vanilla planifolia HOM05D001813 ORTHO05D008124 9.7e-07 57.4 108 37.0
AT5G21060 Arabidopsis thaliana HOM05D001813 ORTHO05D008124 1.3e-06 57.0 108 39.8
CARHR191810 Cardamine hirsuta HOM05D001813 ORTHO05D008124 1.3e-06 57.0 111 38.7
PGSC0003DMG400027401 Solanum tuberosum HOM05D001813 ORTHO05D008124 1.3e-06 57.0 58 55.2
AL6G32610 Arabidopsis lyrata HOM05D001813 ORTHO05D008124 1.7e-06 56.6 109 39.4
CsaV3_1G042050 Cucumis sativus L. HOM05D001813 ORTHO05D008124 1.7e-06 56.6 108 42.6
Eucgr.J00623 Eucalyptus grandis HOM05D001813 ORTHO05D008124 2.8e-06 55.8 63 57.1
SalBow3G4352 Salvia bowleyana HOM05D001813 ORTHO05D008124 2.8e-06 55.8 109 40.4
Solyc11g072010.3 Solanum lycopersicum HOM05D001813 ORTHO05D008124 2.8e-06 55.8 58 53.4
Sopen11g029670 Solanum pennellii HOM05D001813 ORTHO05D008124 2.8e-06 55.8 58 53.4
ClCG03G014190 Citrullus lanatus HOM05D001813 ORTHO05D008124 3.7e-06 55.5 93 45.2
GSVIVG01037466001 Vitis vinifera HOM05D001813 ORTHO05D008124 4.8e-06 55.1 110 39.1
Cc01_g07600 Coffea canephora HOM05D001813 ORTHO05D008124 6.3e-06 54.7 58 56.9
Lalb_Chr02g0158501 Lupinus albus HOM05D001813 ORTHO05D008124 6.3e-06 54.7 109 38.5
AUR62020171 Chenopodium quinoa HOM05D001813 ORTHO05D008124 8.2e-06 54.3 59 52.5


User provided reference genes

Program Settings