Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra09G0120100 Salix brachista HOM05D002025 ORTHO05D001991 2.1e-66 256.1 192 100.0
Potri.009G151600 Populus trichocarpa HOM05D002025 ORTHO05D001991 4.4e-40 168.7 166 64.5
Potri.004G190500 Populus trichocarpa HOM05D002025 ORTHO05D001991 6.5e-28 128.3 168 48.8
Sabra04G0127800 Salix brachista HOM05D001265 ORTHO05D001241 1.1e-27 127.5 203 45.3
TWI31G1059 Tripterygium wilfordii HOM05D002025 ORTHO05D001991 3.5e-13 79.3 171 40.9
Atru.chr3.3062 Acer truncatum HOM05D002025 ORTHO05D001991 3.3e-11 72.8 171 38.6
Manes.11G104560 Manihot esculenta HOM05D002025 ORTHO05D001991 4.3e-11 72.4 167 36.5
Ciclev10029482m.g Citrus clementina HOM05D002025 ORTHO05D001991 1.2e-10 70.9 170 44.7
Thecc.09G268500 Theobroma cacao HOM05D002025 ORTHO05D001991 6.1e-10 68.6 168 33.3
Gohir.A01G135600 Gossypium hirsutum HOM05D002025 ORTHO05D001991 4.0e-09 65.9 170 29.4
ClCG10G018030 Citrullus lanatus HOM05D002025 ORTHO05D001991 8.9e-09 64.7 167 34.7
COL.COLO4_29503 Corchorus olitorius HOM05D002025 ORTHO05D001991 1.2e-08 64.3 171 30.4
CsaV3_3G038280 Cucumis sativus L. HOM05D002025 ORTHO05D001991 1.2e-08 64.3 166 34.9
Lalb_Chr06g0172901 Lupinus albus HOM05D002025 ORTHO05D001991 1.5e-08 63.9 174 31.6
Cc06_g06920 Coffea canephora HOM05D002025 ORTHO05D001991 2.0e-08 63.5 169 30.2
TAR369G1029 Trochodendron aralioides HOM05D002025 ORTHO05D001991 2.6e-08 63.2 169 32.0
TAR623G1549 Trochodendron aralioides HOM05D002025 ORTHO05D001991 2.6e-08 63.2 169 32.5
MELO3C009569.2 Cucumis melo HOM05D002025 ORTHO05D001991 4.4e-08 62.4 167 35.3
PGR142G1790 Punica granatum HOM05D002025 ORTHO05D001991 5.8e-08 62.0 171 28.7
CsaV3_4G023240 Cucumis sativus L. HOM05D004133 ORTHO05D004683 7.5e-08 61.6 166 31.3
Gorai.002G153700 Gossypium raimondii HOM05D002025 ORTHO05D001991 7.5e-08 61.6 170 30.0
Actinidia37774 Actinidia chinensis HOM05D002025 ORTHO05D001991 1.3e-07 60.8 175 31.4
Cfa020076 Carpinus fangiana HOM05D002025 ORTHO05D001991 1.3e-07 60.8 141 31.9
Migut.J00733 Erythranthe guttata HOM05D002025 ORTHO05D001991 1.3e-07 60.8 167 28.7
Actinidia03858 Actinidia chinensis HOM05D002025 ORTHO05D001991 1.7e-07 60.5 166 31.9
Actinidia03966 Actinidia chinensis HOM05D002025 ORTHO05D001991 1.7e-07 60.5 166 31.9
ClCG02G024100 Citrullus lanatus HOM05D002025 ORTHO05D001991 2.2e-07 60.1 167 31.1
COL.COLO4_25368 Corchorus olitorius HOM05D002025 ORTHO05D001991 2.2e-07 60.1 165 30.9
Duzib168G1208 Durio zibethinus HOM05D002025 ORTHO05D001991 2.2e-07 60.1 163 35.0
Manes.06G067800 Manihot esculenta HOM05D002025 ORTHO05D001991 2.9e-07 59.7 175 30.9
PGR119G2356 Punica granatum HOM05D002025 ORTHO05D001991 2.9e-07 59.7 170 28.2
Ca_11664_v3 Cicer arietinum L. HOM05D002025 ORTHO05D001991 3.7e-07 59.3 175 28.6
Duzib093G1955 Durio zibethinus HOM05D002025 ORTHO05D001991 4.9e-07 58.9 166 27.1
Nitab4.5_0003557g0010 Nicotiana tabacum HOM05D002025 ORTHO05D001991 4.9e-07 58.9 170 31.8
Duzib128G1567 Durio zibethinus HOM05D002025 ORTHO05D001991 6.4e-07 58.5 170 27.6
Gohir.D01G122800 Gossypium hirsutum HOM05D002025 ORTHO05D001991 6.4e-07 58.5 170 29.4
SGA_v2.0_scaffold112G31684 Striga asiatica HOM05D002025 ORTHO05D001991 6.4e-07 58.5 140 37.1
Cpa.g.sc103.48 Carica papaya HOM05D002025 ORTHO05D001991 8.3e-07 58.2 175 33.1
Haze_20117 Corylus avellana HOM05D002025 ORTHO05D001991 8.3e-07 58.2 124 32.3
Gohir.A04G058400 Gossypium hirsutum HOM05D002025 ORTHO05D001991 8.3e-07 58.2 168 29.2
Lj5g0013690 Lotus japonicus HOM05D002025 ORTHO05D001991 1.1e-06 57.8 179 32.4
Manes.09G042300 Manihot esculenta HOM05D002025 ORTHO05D001991 1.1e-06 57.8 161 30.4
Nitab4.5_0000835g0060 Nicotiana tabacum HOM05D002025 ORTHO05D001991 1.1e-06 57.8 170 32.4
Eucgr.K01912 Eucalyptus grandis HOM05D002025 ORTHO05D001991 1.4e-06 57.4 169 32.5
MBI05_g12629_MAGBIO Magnolia biondii HOM05D002025 ORTHO05D001991 1.4e-06 57.4 170 31.2
Gohir.D04G092900 Gossypium hirsutum HOM05D002025 ORTHO05D001991 1.9e-06 57.0 168 29.2
Medtr1g054990 Medicago truncatula HOM05D002025 ORTHO05D001991 1.9e-06 57.0 183 26.8
Cfa010216 Carpinus fangiana HOM05D002025 ORTHO05D001991 2.4e-06 56.6 177 34.5
MD14G1044000 Malus domestica HOM05D002025 ORTHO05D001991 2.4e-06 56.6 169 31.4
Psat0s4652g0040 Pisum sativum HOM05D002025 ORTHO05D001991 2.4e-06 56.6 177 31.6
Prupe.7G090300 Prunus persica HOM05D002025 ORTHO05D001991 2.4e-06 56.6 173 30.6
MELO3C014692.2 Cucumis melo HOM05D002025 ORTHO05D001991 4.1e-06 55.8 167 29.9
Nitab4.5_0000875g0050 Nicotiana tabacum HOM05D002025 ORTHO05D001991 4.1e-06 55.8 137 51.1
Peaxi162Scf00203g00052 Petunia axillaris HOM05D002025 ORTHO05D001991 4.1e-06 55.8 170 28.8
Sopen06g030250 Solanum pennellii HOM05D002025 ORTHO05D001991 4.1e-06 55.8 122 42.6
Sed0003384 Sechium edule HOM05D002025 ORTHO05D001991 5.4e-06 55.5 145 34.5
CiPaw.09G023600 Carya illinoinensis HOM05D002025 ORTHO05D001991 7.0e-06 55.1 165 31.5
Dinv18867 Davidia involucrata HOM05D002025 ORTHO05D001991 7.0e-06 55.1 160 48.8
Duzib106G0588 Durio zibethinus HOM05D002025 ORTHO05D001991 7.0e-06 55.1 166 26.5
Oeu058188.1 Olea europaea HOM05D002025 ORTHO05D001991 7.0e-06 55.1 157 49.0
Peaxi162Scf00098g00155 Petunia axillaris HOM05D002025 ORTHO05D001991 7.0e-06 55.1 134 29.9
Thecc.05G109600 Theobroma cacao HOM05D002025 ORTHO05D001991 7.0e-06 55.1 168 27.4
MD12G1045100 Malus domestica HOM05D002025 ORTHO05D001991 9.2e-06 54.7 172 30.8
Nn4g24817 Nelumbo nucifera HOM05D002025 ORTHO05D001991 9.2e-06 54.7 167 28.7
Rhsim01G0198700 Rhododendron simsii HOM05D002025 ORTHO05D001991 9.2e-06 54.7 172 42.4
Sabra16G0067700 Salix brachista HOM05D002025 ORTHO05D001991 9.2e-06 54.7 124 28.2
Solyc06g073850.1 Solanum lycopersicum HOM05D002025 ORTHO05D001991 9.2e-06 54.7 122 42.6


User provided reference genes

Program Settings