Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra09G0119700 Salix brachista HOM05D006347 ORTHO05D007835 1.8e-290 1001.9 521 100.0
Potri.009G151100 Populus trichocarpa HOM05D006347 ORTHO05D007835 3.6e-262 907.9 523 91.4
Manes.04G010900 Manihot esculenta HOM05D006347 ORTHO05D007835 8.4e-171 604.4 541 63.8
Thecc.09G294500 Theobroma cacao HOM05D006347 ORTHO05D007835 1.1e-167 594.0 496 62.7
QL01p014117 Quercus lobata HOM05D006347 ORTHO05D007835 3.1e-165 585.9 542 58.7
CiPaw.14G105000 Carya illinoinensis HOM05D006347 ORTHO05D007835 2.5e-162 576.2 539 59.2
Prupe.6G116300 Prunus persica HOM05D006347 ORTHO05D007835 3.9e-160 568.9 544 58.1
Dinv29404 Davidia involucrata HOM05D006347 ORTHO05D007835 7.4e-159 564.7 505 61.2
Gorai.001G118600 Gossypium raimondii HOM05D006347 ORTHO05D007835 1.8e-157 560.1 523 58.7
Gohir.D07G110400 Gossypium hirsutum HOM05D006347 ORTHO05D007835 2.4e-157 559.7 523 58.7
Gohir.A07G106500 Gossypium hirsutum HOM05D006347 ORTHO05D007835 5.3e-157 558.5 523 58.3
MD11G1153600 Malus domestica HOM05D006347 ORTHO05D007835 2.0e-156 556.6 534 58.1
Duzib168G1158 Durio zibethinus HOM05D006347 ORTHO05D007835 3.4e-156 555.8 502 60.8
Ciclev10028160m.g Citrus clementina HOM05D006347 ORTHO05D007835 5.0e-155 552.0 507 59.6
GSVIVG01031423001 Vitis vinifera HOM05D006347 ORTHO05D007835 2.5e-154 549.7 544 57.4
TWI31G1233 Tripterygium wilfordii HOM05D006347 ORTHO05D007835 4.7e-153 545.4 535 58.1
RcHm_v2.0_Chr5g0055941 Rosa chinensis HOM05D006347 ORTHO05D007835 4.4e-151 538.9 540 57.6
Glyma.13G320700 Glycine max HOM05D006347 ORTHO05D007835 5.7e-151 538.5 522 56.3
VMungo1080G1358 Vigna mungo HOM05D006347 ORTHO05D007835 3.5e-148 529.3 514 56.4
Sed0011208 Sechium edule HOM05D006347 ORTHO05D007835 4.5e-148 528.9 488 58.0
CsaV3_6G014560 Cucumis sativus L. HOM05D006347 ORTHO05D007835 2.9e-147 526.2 542 55.0
FvH4_3g29990 Fragaria vesca HOM05D006347 ORTHO05D007835 2.5e-146 523.1 535 55.7
Hma1.2p1_0884F.1_g232450 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 3.2e-146 522.7 494 57.1
FAN21G3835 Fragaria x ananassa HOM05D006347 ORTHO05D007835 2.7e-145 519.6 552 54.0
FAN11G3746 Fragaria x ananassa HOM05D006347 ORTHO05D007835 2.3e-144 516.5 541 54.9
Lalb_Chr22g0350521 Lupinus albus HOM05D006347 ORTHO05D007835 1.1e-143 514.2 492 56.3
Lj3g0008152 Lotus japonicus HOM05D006347 ORTHO05D007835 9.7e-143 511.1 512 55.3
FAN25G1668 Fragaria x ananassa HOM05D006347 ORTHO05D007835 4.8e-142 508.8 552 53.6
CANSAT56G1452 Cannabis sativa HOM05D006347 ORTHO05D007835 8.2e-142 508.1 496 54.6
MELO3C021469.2 Cucumis melo HOM05D006347 ORTHO05D007835 3.1e-141 506.1 578 51.4
arahy.Tifrunner.gnm1.ann1.PRK8FW Arachis hypogaea HOM05D006347 ORTHO05D007835 7.0e-141 505.0 508 54.7
TPR.G32394 Trifolium pratense HOM05D006347 ORTHO05D007835 7.0e-141 505.0 504 55.6
Cfa021537 Carpinus fangiana HOM05D006347 ORTHO05D007835 5.9e-140 501.9 550 53.5
Sp6g22600 Schrenkiella parvula HOM05D006347 ORTHO05D007835 5.9e-140 501.9 500 55.6
Atru.chr3.3422 Acer truncatum HOM05D006347 ORTHO05D007835 2.2e-139 500.0 488 58.8
THA.LOC104810888 Tarenaya hassleriana HOM05D006347 ORTHO05D007835 6.5e-139 498.4 492 54.1
Medtr2g084580 Medicago truncatula HOM05D006347 ORTHO05D007835 1.5e-138 497.3 505 54.7
AL6G33930 Arabidopsis lyrata HOM05D006347 ORTHO05D007835 4.2e-138 495.7 488 54.5
Eucgr.J00411 Eucalyptus grandis HOM05D006347 ORTHO05D007835 1.6e-137 493.8 527 53.1
Thhalv10013199m.g Eutrema salsugineum HOM05D006347 ORTHO05D007835 1.6e-137 493.8 535 52.1
ECA238G1908 Erigeron canadensis HOM05D006347 ORTHO05D007835 2.1e-137 493.4 511 54.0
Carub.0006s2054 Capsella rubella HOM05D006347 ORTHO05D007835 1.8e-136 490.3 491 54.2
PGR119G2351 Punica granatum HOM05D006347 ORTHO05D007835 5.2e-136 488.8 498 56.8
AT5G22820 Arabidopsis thaliana HOM05D006347 ORTHO05D007835 8.8e-136 488.0 489 54.4
Psat5g253920 Pisum sativum HOM05D006347 ORTHO05D007835 1.5e-135 487.3 523 53.5
CARHR190750 Cardamine hirsuta HOM05D006347 ORTHO05D007835 2.0e-135 486.9 521 53.2
Sc12g0003850 Simmondsia chinensis HOM05D006347 ORTHO05D007835 1.7e-134 483.8 510 51.0
BcaB05g22687 Brassica carinata HOM05D006347 ORTHO05D007835 3.7e-134 482.6 539 51.0
ClCG02G021770 Citrullus lanatus HOM05D006347 ORTHO05D007835 3.1e-133 479.6 555 51.4
Haze_23489 Corylus avellana HOM05D006347 ORTHO05D007835 4.1e-133 479.2 409 62.1
Phvul.005G128700 Phaseolus vulgaris HOM05D006347 ORTHO05D007835 7.0e-133 478.4 431 57.5
Lsat_1_v5_gn_2_96801 Lactuca sativa HOM05D006347 ORTHO05D007835 9.1e-133 478.0 534 52.1
C02p11300 Brassica napus HOM05D006347 ORTHO05D007835 2.9e-131 473.0 493 54.8
BcaC03g13920 Brassica carinata HOM05D006347 ORTHO05D007835 6.5e-131 471.9 520 52.5
AUR62031770 Chenopodium quinoa HOM05D006347 ORTHO05D007835 6.5e-131 471.9 498 52.8
Actinidia24168 Actinidia chinensis HOM05D006347 ORTHO05D007835 8.0e-129 464.9 494 54.5
BNapus_Darmor_BZH_scaffold_38p00360 Brassica napus HOM05D006347 ORTHO05D007835 8.0e-129 464.9 533 51.8
Cc01_g10020 Coffea canephora HOM05D006347 ORTHO05D007835 7.5e-127 458.4 540 50.2
Aqoxy1G01013 Aquilegia oxysepala HOM05D006347 ORTHO05D007835 2.8e-126 456.4 538 50.4
vmacro03233 Vaccinium macrocarpon HOM05D006347 ORTHO05D007835 4.8e-126 455.7 565 48.5
Lj2A998T24 Lonicera japonica HOM05D006347 ORTHO05D007835 8.3e-126 454.9 512 51.8
DCAR_015490 Daucus carota HOM05D006347 ORTHO05D007835 1.2e-124 451.1 542 49.1
SalBow6G0094 Salvia bowleyana HOM05D006347 ORTHO05D007835 1.6e-124 450.7 542 49.3
BraA02t05690Z Brassica rapa HOM05D006347 ORTHO05D007835 2.0e-124 450.3 536 50.6
Haze_23473 Corylus avellana HOM05D006347 ORTHO05D007835 2.0e-124 450.3 501 52.3
BolC2t07198H Brassica oleracea HOM05D006347 ORTHO05D007835 2.7e-124 449.9 532 51.3
Nn2g13927 Nelumbo nucifera HOM05D006347 ORTHO05D007835 7.7e-124 448.4 488 52.7
CAN.G1432.26 Capsicum annuum HOM05D006347 ORTHO05D007835 1.0e-123 448.0 484 53.1
MSTRG.18715 Avicennia marina HOM05D006347 ORTHO05D007835 2.9e-123 446.4 494 51.8
arahy.Tifrunner.gnm1.ann1.9T0HEQ Arachis hypogaea HOM05D006347 ORTHO05D007835 6.6e-123 445.3 563 47.6
Ca_01691_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 7.2e-122 441.8 412 56.6
Ca_30937_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 7.2e-122 441.8 412 56.6
EL10Ac9g21046 Beta vulgaris HOM05D006347 ORTHO05D007835 1.2e-121 441.0 538 48.1
SGA_v2.0_scaffold27G11587 Striga asiatica HOM05D006347 ORTHO05D007835 1.2e-121 441.0 465 55.1
Nitab4.5_0005038g0010 Nicotiana tabacum HOM05D006347 ORTHO05D007835 6.1e-121 438.7 488 50.2
PGSC0003DMG400007153 Solanum tuberosum HOM05D006347 ORTHO05D007835 2.3e-120 436.8 503 50.9
HanXRQChr07g0197561 Helianthus annuus HOM05D006347 ORTHO05D007835 5.2e-120 435.6 447 54.1
Sopen06g031100 Solanum pennellii HOM05D006347 ORTHO05D007835 1.7e-118 430.6 517 49.1
Peaxi162Scf00157g00213 Petunia axillaris HOM05D006347 ORTHO05D007835 3.7e-118 429.5 551 47.7
Migut.D02321 Erythranthe guttata HOM05D006347 ORTHO05D007835 5.9e-116 422.2 477 51.6
AUR62023970 Chenopodium quinoa HOM05D006347 ORTHO05D007835 2.3e-115 420.2 522 48.5
PSO063G2566 Papaver somniferum HOM05D006347 ORTHO05D007835 3.3e-114 416.4 510 46.5
COL.COLO4_19257 Corchorus olitorius HOM05D006347 ORTHO05D007835 5.6e-114 415.6 543 47.9
Solyc06g074690.3 Solanum lycopersicum HOM05D006347 ORTHO05D007835 3.4e-111 406.4 579 44.2
Hma1.2p1_0884F.1_g232440 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 2.9e-110 403.3 442 52.5
Aa31LG1G12890 Aethionema arabicum HOM05D006347 ORTHO05D007835 1.1e-109 401.4 541 45.5
Nitab4.5_0003470g0080 Nicotiana tabacum HOM05D006347 ORTHO05D007835 7.0e-109 398.7 450 50.0
Rhsim13G0103600 Rhododendron simsii HOM05D006347 ORTHO05D007835 1.6e-100 370.9 370 55.4
ATR0665G610 Amborella trichopoda HOM05D006347 ORTHO05D007835 5.6e-98 362.5 469 44.8
PSO339G5358 Papaver somniferum HOM05D006347 ORTHO05D007835 3.4e-95 353.2 423 47.8
TAR633G1474 Trochodendron aralioides HOM05D006347 ORTHO05D007835 3.2e-93 346.7 352 56.5
unitig_899.g14960 Utricularia gibba HOM05D006347 ORTHO05D007835 1.0e-91 341.7 565 40.0
Haze_23492 Corylus avellana HOM05D006347 ORTHO05D007835 2.3e-91 340.5 409 48.9
Ah.01g016170 Amaranthus hybridus HOM05D006347 ORTHO05D007835 2.3e-83 313.9 390 48.7
HPP92_014171 Vanilla planifolia HOM05D006347 ORTHO05D007835 5.6e-82 309.3 551 38.3
HPP92_014151 Vanilla planifolia HOM05D006347 ORTHO05D007835 7.3e-82 308.9 551 38.3
Os03g0684100 Oryza sativa ssp. japonica HOM05D006347 ORTHO05D007835 1.1e-74 285.0 489 38.7
Peaxi162Scf00755g00310 Petunia axillaris HOM05D006347 ORTHO05D007835 3.1e-72 276.9 423 41.1
AagrBONN_evm.TU.Sc2ySwM_117.1516 Anthoceros agrestis HOM05D006347 ORTHO05D007835 9.3e-69 265.4 513 36.1
Glyma.12G180067 Glycine max HOM05D006347 ORTHO05D007835 5.6e-66 256.1 213 61.0
Pp3c4_24670 Physcomitrium patens HOM05D006347 ORTHO05D007835 1.3e-65 255.0 547 33.6
Mapoly0004s0056 Marchantia polymorpha HOM05D006347 ORTHO05D007835 1.8e-64 251.1 413 39.2
Zm00001eb053190 Zea mays HOM05D006347 ORTHO05D007835 2.4e-64 250.8 347 41.2
FAN16G0411 Fragaria x ananassa HOM05D006347 ORTHO05D007835 9.6e-58 228.8 212 58.0
CBR_g54933 Chara braunii HOM05D006347 ORTHO05D007835 1.6e-57 228.0 376 36.2
Glyma.12G180133 Glycine max HOM05D006347 ORTHO05D007835 5.1e-51 206.5 192 55.7
Haze_23495 Corylus avellana HOM05D006347 ORTHO05D007835 6.9e-48 196.1 285 43.9
Cpa.g.sc47.36 Carica papaya HOM05D006347 ORTHO05D007835 1.1e-45 188.7 210 53.8
Haze_23480 Corylus avellana HOM05D006347 ORTHO05D007835 5.1e-43 179.9 150 64.0
Ah.01g016190 Amaranthus hybridus HOM05D006347 ORTHO05D007835 2.5e-37 161.0 231 48.5
CSS0047528 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 1.2e-36 158.7 167 52.1
SMO265G0001 Selaginella moellendorffii HOM05D006347 ORTHO05D007835 3.6e-36 157.1 258 37.6
CDE02G2671 Ceratophyllum demersum HOM05D006347 ORTHO05D007835 6.3e-25 119.8 473 25.8
TAR633G2060 Trochodendron aralioides HOM05D006347 ORTHO05D007835 5.4e-16 90.1 122 43.4
Hund07723 Selenicereus undatus HOM05D006347 ORTHO05D007835 3.8e-14 84.0 147 39.5
CSS0039987 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 1.8e-11 75.1 65 60.0
SEGI_37044 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 1.2e-10 72.4 89 43.8
BcaC02g08433 Brassica carinata HOM05D000452 ORTHO05D005748 1.5e-10 72.0 107 42.1
SEGI_35353 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 2.6e-10 71.2 70 48.6
Actinidia14339 Actinidia chinensis HOM05D006347 ORTHO05D007835 2.4e-08 64.7 59 61.0
BolC4t23229H Brassica oleracea HOM05D000452 ORTHO05D005748 3.1e-08 64.3 96 43.8
SEGI_13685 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 1.2e-07 62.4 150 28.7
BolC2t09709H Brassica oleracea HOM05D000452 ORTHO05D005748 1.0e-06 59.3 94 39.4
C04p54260 Brassica napus HOM05D000452 ORTHO05D005748 2.9e-06 57.8 94 40.4


User provided reference genes

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