Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra09G0095800 Salix brachista HOM05D006147 ORTHO05D007501 1.8e-207 725.7 363 100.0
Potri.009G124800 Populus trichocarpa HOM05D006147 ORTHO05D007501 7.4e-190 667.2 363 93.4
Cpa.g.sc150.15 Carica papaya HOM05D006147 ORTHO05D007501 8.8e-167 590.5 354 84.2
TWI31G1450 Tripterygium wilfordii HOM05D006147 ORTHO05D007501 3.3e-166 588.6 358 81.3
COL.COLO4_26048 Corchorus olitorius HOM05D006147 ORTHO05D007501 4.2e-161 571.6 352 80.4
Gohir.D02G220700 Gossypium hirsutum HOM05D006147 ORTHO05D007501 2.1e-160 569.3 352 80.4
Cfa005114 Carpinus fangiana HOM05D006147 ORTHO05D007501 2.7e-160 568.9 354 81.9
Gohir.A03G199400 Gossypium hirsutum HOM05D006147 ORTHO05D007501 3.6e-160 568.5 352 80.1
QL11p046465 Quercus lobata HOM05D006147 ORTHO05D007501 3.0e-159 565.5 353 80.5
Thecc.02G074800 Theobroma cacao HOM05D006147 ORTHO05D007501 2.6e-158 562.4 362 78.2
Prupe.8G083600 Prunus persica HOM05D006147 ORTHO05D007501 3.3e-158 562.0 353 79.3
MD05G1055500 Malus domestica HOM05D006147 ORTHO05D007501 7.5e-158 560.8 353 79.0
TAR628G0064 Trochodendron aralioides HOM05D006147 ORTHO05D007501 2.8e-157 558.9 356 78.4
Duzib248G0035 Durio zibethinus HOM05D006147 ORTHO05D007501 4.8e-157 558.1 394 72.6
Ciclev10028728m.g Citrus clementina HOM05D006147 ORTHO05D007501 1.1e-156 557.0 363 77.4
MD10G1062800 Malus domestica HOM05D006147 ORTHO05D007501 1.1e-156 557.0 353 78.8
PGR042G0282 Punica granatum HOM05D006147 ORTHO05D007501 1.1e-156 557.0 359 77.2
FAN27G3378 Fragaria x ananassa HOM05D006147 ORTHO05D007501 4.1e-156 555.1 354 78.2
CANSAT11G2690 Cannabis sativa HOM05D006147 ORTHO05D007501 5.3e-156 554.7 354 79.1
Eucgr.G01732 Eucalyptus grandis HOM05D006147 ORTHO05D007501 9.1e-156 553.9 352 77.8
RcHm_v2.0_Chr6g0267981 Rosa chinensis HOM05D006147 ORTHO05D007501 1.2e-155 553.5 354 78.0
vmacro17420 Vaccinium macrocarpon HOM05D006147 ORTHO05D007501 2.7e-155 552.4 378 75.1
Sed0012779 Sechium edule HOM05D006147 ORTHO05D007501 3.5e-155 552.0 354 77.7
Atru.chr5.3146 Acer truncatum HOM05D006147 ORTHO05D007501 1.0e-154 550.4 354 78.2
CAN.G1635.6 Capsicum annuum HOM05D006147 ORTHO05D007501 5.5e-153 544.7 368 73.4
VMungo1127G0575 Vigna mungo HOM05D006147 ORTHO05D007501 9.4e-153 543.9 354 76.0
Aqoxy6G02357 Aquilegia oxysepala HOM05D006147 ORTHO05D007501 2.1e-152 542.7 371 75.5
CsaV3_7G000410 Cucumis sativus L. HOM05D006147 ORTHO05D007501 2.1e-152 542.7 351 76.6
GSVIVG01024169001 Vitis vinifera HOM05D006147 ORTHO05D007501 2.1e-152 542.7 360 75.8
TPR.G28159 Trifolium pratense HOM05D006147 ORTHO05D007501 2.7e-152 542.3 355 74.6
Manes.04G083100 Manihot esculenta HOM05D006147 ORTHO05D007501 3.6e-152 542.0 314 84.1
arahy.Tifrunner.gnm1.ann1.JUX7JJ Arachis hypogaea HOM05D006147 ORTHO05D007501 6.1e-152 541.2 367 74.1
CiPaw.05G073500 Carya illinoinensis HOM05D006147 ORTHO05D007501 1.0e-151 540.4 312 85.9
Medtr4g072040 Medicago truncatula HOM05D006147 ORTHO05D007501 1.4e-151 540.0 355 75.2
CSS0016386 Camellia sinensis var. sinensis HOM05D006147 ORTHO05D007501 2.3e-151 539.3 311 84.2
THA.LOC104804110 Tarenaya hassleriana HOM05D006147 ORTHO05D007501 2.3e-151 539.3 347 77.2
Lalb_Chr03g0025341 Lupinus albus HOM05D006147 ORTHO05D007501 4.0e-151 538.5 354 76.0
arahy.Tifrunner.gnm1.ann1.S6V2XE Arachis hypogaea HOM05D006147 ORTHO05D007501 5.2e-151 538.1 367 73.8
AL4G10420 Arabidopsis lyrata HOM05D006147 ORTHO05D007501 8.8e-151 537.3 363 73.6
PSO210G6769 Papaver somniferum HOM05D006147 ORTHO05D007501 8.8e-151 537.3 372 73.4
FAN15G0109 Fragaria x ananassa HOM05D006147 ORTHO05D007501 2.6e-150 535.8 357 76.5
Ca_20936_v3 Cicer arietinum L. HOM05D006147 ORTHO05D007501 4.4e-150 535.0 342 76.6
C04p50520 Brassica napus HOM05D006147 ORTHO05D007501 5.7e-150 534.6 358 73.2
CSS0033675 Camellia sinensis var. sinensis HOM05D006147 ORTHO05D007501 5.7e-150 534.6 311 83.3
A04p16060 Brassica napus HOM05D006147 ORTHO05D007501 9.8e-150 533.9 364 73.4
Glyma.11G110000 Glycine max HOM05D006147 ORTHO05D007501 2.8e-149 532.3 355 74.6
EL10Ac9g21633 Beta vulgaris HOM05D006147 ORTHO05D007501 4.8e-149 531.6 364 74.5
Haze_02237 Corylus avellana HOM05D006147 ORTHO05D007501 6.3e-149 531.2 400 70.8
Migut.N01278 Erythranthe guttata HOM05D006147 ORTHO05D007501 6.3e-149 531.2 354 73.2
AT2G21280 Arabidopsis thaliana HOM05D006147 ORTHO05D007501 4.1e-148 528.5 363 73.6
Sopen09g034870 Solanum pennellii HOM05D006147 ORTHO05D007501 5.4e-148 528.1 364 73.4
BcaC02g08802 Brassica carinata HOM05D006147 ORTHO05D007501 7.0e-148 527.7 358 72.3
BolC4t26650H Brassica oleracea HOM05D006147 ORTHO05D007501 7.0e-148 527.7 358 72.3
Solyc09g091970.4 Solanum lycopersicum HOM05D006147 ORTHO05D007501 9.1e-148 527.3 364 73.1
Peaxi162Scf00684g00123 Petunia axillaris HOM05D006147 ORTHO05D007501 1.6e-147 526.6 323 78.9
Lj3g0027328 Lotus japonicus HOM05D006147 ORTHO05D007501 2.0e-147 526.2 354 74.0
PGSC0003DMG402031287 Solanum tuberosum HOM05D006147 ORTHO05D007501 2.0e-147 526.2 364 73.1
Aa31LG7G15210 Aethionema arabicum HOM05D006147 ORTHO05D007501 3.5e-147 525.4 350 73.4
CARHR112150 Cardamine hirsuta HOM05D006147 ORTHO05D007501 3.5e-147 525.4 363 72.5
Actinidia02248 Actinidia chinensis HOM05D006147 ORTHO05D007501 7.7e-147 524.2 311 82.6
Thhalv10000221m.g Eutrema salsugineum HOM05D006147 ORTHO05D007501 1.7e-146 523.1 350 73.7
Carub.0004s0032 Capsella rubella HOM05D006147 ORTHO05D007501 3.8e-146 521.9 363 71.6
Gorai.005G248600 Gossypium raimondii HOM05D006147 ORTHO05D007501 3.8e-146 521.9 319 81.5
ECA233G5423 Erigeron canadensis HOM05D006147 ORTHO05D001140 3.3e-145 518.8 360 72.5
Sp4g00470 Schrenkiella parvula HOM05D006147 ORTHO05D007501 3.3e-145 518.8 363 71.1
AUR62016834 Chenopodium quinoa HOM05D006147 ORTHO05D007501 3.6e-144 515.4 365 71.8
Oeu055635.1 Olea europaea HOM05D006147 ORTHO05D007501 3.6e-144 515.4 337 75.4
SalBow3G3875 Salvia bowleyana HOM05D006147 ORTHO05D007501 4.7e-144 515.0 354 71.8
Glyma.12G036900 Glycine max HOM05D006147 ORTHO05D007501 6.1e-144 514.6 315 78.7
Hund00177 Selenicereus undatus HOM05D006147 ORTHO05D007501 2.3e-143 512.7 334 74.3
Hund00185 Selenicereus undatus HOM05D006147 ORTHO05D007501 2.6e-142 509.2 320 75.9
Psat7g138880 Pisum sativum HOM05D006147 ORTHO05D007501 1.3e-141 506.9 312 78.5
Phvul.011G038600 Phaseolus vulgaris HOM05D006147 ORTHO05D007501 1.1e-140 503.8 312 79.2
AUR62010384 Chenopodium quinoa HOM05D006147 ORTHO05D007501 3.8e-138 495.4 399 65.7
Lj5C189G13 Lonicera japonica HOM05D006147 ORTHO05D007501 3.8e-138 495.4 334 74.9
ATR0149G025 Amborella trichopoda HOM05D006147 ORTHO05D007501 1.9e-137 493.0 333 73.9
HPP92_002502 Vanilla planifolia HOM05D006147 ORTHO05D007501 2.8e-136 489.2 312 75.3
Rhsim05G0068100 Rhododendron simsii HOM05D006147 ORTHO05D007501 9.8e-134 480.7 387 66.1
ClCG02G004540 Citrullus lanatus HOM05D006147 ORTHO05D007501 8.3e-133 477.6 351 70.4
Sc18g0005390 Simmondsia chinensis HOM05D006147 ORTHO05D007501 1.3e-130 470.3 325 74.5
DCAR_003686 Daucus carota HOM05D006147 ORTHO05D007501 5.6e-129 464.9 290 77.2
Os02g0834700 Oryza sativa ssp. japonica HOM05D006147 ORTHO05D007501 6.2e-128 461.5 321 69.2
Lsat_1_v5_gn_8_127980 Lactuca sativa HOM05D006147 ORTHO05D007501 1.4e-127 460.3 360 67.8
CDE02G0092 Ceratophyllum demersum HOM05D006147 ORTHO05D007501 2.3e-127 459.5 354 65.5
MELO3C002785.2 Cucumis melo HOM05D006147 ORTHO05D007501 2.6e-126 456.1 300 75.7
Nitab4.5_0001154g0060 Nicotiana tabacum HOM05D006147 ORTHO05D007501 2.5e-121 439.5 319 70.2
Pp3c7_11090 Physcomitrium patens HOM05D006147 ORTHO05D007501 3.1e-119 432.6 331 62.2
Pp3c7_11100 Physcomitrium patens HOM05D006147 ORTHO05D007501 3.1e-119 432.6 331 62.2
Mapoly0021s0030 Marchantia polymorpha HOM05D006147 ORTHO05D007501 4.4e-118 428.7 349 59.6
PSO170G3006 Papaver somniferum HOM05D006147 ORTHO05D007501 3.2e-116 422.5 362 63.0
SMO146G0042 Selaginella moellendorffii HOM05D006147 ORTHO05D007501 3.2e-116 422.5 311 64.3
Zm00001eb259680 Zea mays HOM05D006147 ORTHO05D007501 2.1e-115 419.9 304 68.8
Cc02_g16890 Coffea canephora HOM05D006147 ORTHO05D007501 6.4e-109 398.3 283 71.4
unitig_899.g15602 Utricularia gibba HOM05D006147 ORTHO05D007501 3.3e-105 386.0 280 67.1
Dinv41999 Davidia involucrata HOM05D006147 ORTHO05D007501 3.1e-103 379.4 256 77.3
Cre05.g233305 Chlamydomonas reinhardtii HOM05D006147 ORTHO05D007501 2.1e-96 356.7 324 53.1
MCO05G212 Micromonas commoda HOM05D006147 ORTHO05D007501 1.1e-89 334.3 314 49.7
SGA_v2.0_scaffold80G25875 Striga asiatica HOM05D006147 ORTHO05D007501 3.7e-88 329.3 259 63.3
Nitab4.5_0001370g0020 Nicotiana tabacum HOM05D006147 ORTHO05D007501 4.5e-86 322.4 184 83.7
Nn6g32256 Nelumbo nucifera HOM05D006147 ORTHO05D007501 2.2e-85 320.1 244 69.3
MCO16G248 Micromonas commoda HOM05D006147 ORTHO05D007501 1.3e-80 304.3 313 49.2
FvH4_2g10480 Fragaria vesca HOM05D006147 ORTHO05D007501 6.2e-80 302.0 235 66.8
AUR62040654 Chenopodium quinoa HOM05D006147 ORTHO05D007501 9.0e-79 298.1 316 53.8
PRCOL_00000238 Prasinoderma coloniale HOM05D006147 ORTHO05D007501 3.8e-77 292.7 241 57.7
MELO3C028749.2 Cucumis melo HOM05D006147 ORTHO05D007501 6.3e-72 275.4 247 61.9
arahy.Tifrunner.gnm1.ann1.B04QBU Arachis hypogaea HOM05D006147 ORTHO05D007501 8.2e-72 275.0 209 68.4
Nn4g26316 Nelumbo nucifera HOM05D006147 ORTHO05D007501 7.2e-60 235.3 124 87.1
Nn6g32490 Nelumbo nucifera HOM05D006147 ORTHO05D007501 7.2e-60 235.3 124 87.1
C09p25880 Brassica napus HOM05D006147 ORTHO05D007501 7.0e-55 218.8 122 80.3
BolC9t55495H Brassica oleracea HOM05D006147 ORTHO05D007501 2.0e-54 217.2 122 79.5
arahy.Tifrunner.gnm1.ann1.KZ1FWN Arachis hypogaea HOM05D006147 ORTHO05D007501 2.7e-51 206.8 182 62.6
arahy.Tifrunner.gnm1.ann1.63XKYH Arachis hypogaea HOM05D006147 ORTHO05D007501 6.7e-50 202.2 137 73.7
SEGI_33639 Sequoiadendron giganteum HOM05D006147 ORTHO05D007501 4.4e-41 172.9 103 74.8
Pp3s34_200 Physcomitrium patens HOM05D006147 ORTHO05D007501 3.6e-35 153.3 313 30.4
BolC2t08257H Brassica oleracea HOM05D006147 ORTHO05D007501 1.8e-34 151.0 125 63.2
CDE04G1860 Ceratophyllum demersum HOM05D006147 ORTHO05D007501 3.0e-34 150.2 306 35.3
BraA07t28491Z Brassica rapa HOM05D006147 ORTHO05D007501 3.4e-33 146.7 102 71.6
BcaB08g34979 Brassica carinata HOM05D006147 ORTHO05D007501 5.7e-33 146.0 153 54.2
Cc02_g16880 Coffea canephora HOM05D006147 ORTHO05D007501 1.6e-30 137.9 80 80.0
BcaC03g14677 Brassica carinata HOM05D006147 ORTHO05D007501 1.7e-29 134.4 117 61.5
arahy.Tifrunner.gnm1.ann1.PBTS15 Arachis hypogaea HOM05D006147 ORTHO05D007501 5.0e-29 132.9 183 42.6
A07p07030 Brassica napus HOM05D006147 ORTHO05D007501 4.0e-26 123.2 102 63.7
arahy.Tifrunner.gnm1.ann1.UB8UIZ Arachis hypogaea HOM05D006147 ORTHO05D007501 6.3e-24 115.9 172 43.0
C02p21170 Brassica napus HOM05D006147 ORTHO05D007501 1.1e-23 115.2 131 51.9
C02p21180 Brassica napus HOM05D006147 ORTHO05D007501 2.4e-23 114.0 71 69.0
Duzib132G0670 Durio zibethinus HOM05D006147 ORTHO05D007501 5.0e-21 106.3 143 47.6
arahy.Tifrunner.gnm1.ann1.U5A9T5 Arachis hypogaea HOM05D000321 ORTHO05D000204 8.6e-21 105.5 181 40.9
SEGI_01868 Sequoiadendron giganteum HOM05D006147 ORTHO05D007501 1.5e-12 78.2 64 60.9
MBI05_g17912_MAGBIO Magnolia biondii HOM05D006147 ORTHO05D007501 4.3e-12 76.6 46 73.9
MELO3C013418.2 Cucumis melo HOM05D006147 ORTHO05D007501 3.1e-10 70.5 59 62.7
COL.COLO4_26276 Corchorus olitorius HOM05D000089 ORTHO05D000726 2.4e-07 60.8 321 25.5
Duzib093G1615 Durio zibethinus HOM05D000089 ORTHO05D000726 4.1e-07 60.1 321 26.2
Lj1g0008117 Lotus japonicus HOM05D001625 ORTHO05D008114 7.0e-07 59.3 233 27.0


User provided reference genes

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