Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra09G0074600 Salix brachista HOM05D005827 ORTHO05D005864 2.8e-71 271.9 146 100.0
Potri.009G097000 Populus trichocarpa HOM05D005827 ORTHO05D005864 3.6e-63 245.0 158 85.4
Sabra09G0074500 Salix brachista HOM05D005827 ORTHO05D005864 5.8e-61 237.7 189 74.1
Manes.10G074300 Manihot esculenta HOM05D005827 ORTHO05D005864 1.9e-48 196.1 159 71.1
Duzib132G0170 Durio zibethinus HOM05D005827 ORTHO05D005864 4.0e-46 188.3 160 67.5
Nitab4.5_0000209g0220 Nicotiana tabacum HOM05D005827 ORTHO05D005864 1.8e-41 172.9 159 62.9
Thecc.02G106700 Theobroma cacao HOM05D005827 ORTHO05D005864 1.8e-41 172.9 142 69.0
CiPaw.06G170100 Carya illinoinensis HOM05D005827 ORTHO05D005864 5.1e-41 171.4 154 64.9
Atru.chr5.2579 Acer truncatum HOM05D005827 ORTHO05D005864 1.5e-40 169.9 160 63.8
Nitab4.5_0011210g0030 Nicotiana tabacum HOM05D000771 ORTHO05D005864 1.1e-38 163.7 157 59.9
Dinv15756 Davidia involucrata HOM05D005827 ORTHO05D005864 2.4e-38 162.5 159 61.0
Sopen12g028550 Solanum pennellii HOM05D005827 ORTHO05D005864 2.4e-38 162.5 159 59.7
Prupe.1G568500 Prunus persica HOM05D005827 ORTHO05D005864 4.1e-38 161.8 158 60.8
Eucgr.G01363 Eucalyptus grandis HOM05D005827 ORTHO05D005864 9.0e-38 160.6 159 61.6
Gorai.005G235500 Gossypium raimondii HOM05D005827 ORTHO05D005864 9.0e-38 160.6 156 62.2
CAN.G517.16 Capsicum annuum HOM05D005827 ORTHO05D005864 1.2e-37 160.2 151 59.6
QL11p034047 Quercus lobata HOM05D005827 ORTHO05D005864 3.4e-37 158.7 158 61.4
Solyc12g056030.2 Solanum lycopersicum HOM05D005827 ORTHO05D005864 3.4e-37 158.7 159 58.5
PGSC0003DMG400005012 Solanum tuberosum HOM05D005827 ORTHO05D005864 3.4e-37 158.7 159 58.5
Hma1.2p1_0796F.1_g219120 Hydrangea macrophylla HOM05D005827 ORTHO05D005864 7.7e-37 157.5 160 58.1
Gohir.A03G186800 Gossypium hirsutum HOM05D005827 ORTHO05D005864 1.7e-36 156.4 156 60.3
THA.LOC104823732 Tarenaya hassleriana HOM05D005827 ORTHO05D005864 1.7e-36 156.4 161 57.1
Cc02_g19170 Coffea canephora HOM05D005827 ORTHO05D005864 3.8e-36 155.2 158 58.9
Peaxi162Scf00880g00322 Petunia axillaris HOM05D005827 ORTHO05D005864 8.5e-36 154.1 159 57.2
Gohir.D02G207600 Gossypium hirsutum HOM05D005827 ORTHO05D005864 1.9e-35 152.9 156 60.9
Nitab4.5_0001647g0080 Nicotiana tabacum HOM05D005827 ORTHO05D005864 1.9e-35 152.9 147 59.9
QL11p033993 Quercus lobata HOM05D005827 ORTHO05D005864 2.5e-35 152.5 152 59.9
FAN04G0262 Fragaria x ananassa HOM05D005827 ORTHO05D005864 9.4e-35 150.6 145 62.8
MD15G1423200 Malus domestica HOM05D005827 ORTHO05D005864 1.2e-34 150.2 159 56.0
Rhsim11G0160600 Rhododendron simsii HOM05D005827 ORTHO05D005864 1.2e-34 150.2 155 55.5
FAN08G1793 Fragaria x ananassa HOM05D005827 ORTHO05D005864 2.1e-34 149.4 165 58.2
Cpa.g.sc246.10 Carica papaya HOM05D005827 ORTHO05D005864 2.7e-34 149.1 160 56.9
COL.COLO4_32605 Corchorus olitorius HOM05D005827 ORTHO05D005864 4.6e-34 148.3 164 55.5
RcHm_v2.0_Chr7g0222441 Rosa chinensis HOM05D005827 ORTHO05D005864 7.9e-34 147.5 167 55.7
FAN18G4374 Fragaria x ananassa HOM05D005827 ORTHO05D005864 2.3e-33 146.0 166 56.6
Haze_10160 Corylus avellana HOM05D005827 ORTHO05D005864 3.0e-33 145.6 138 60.9
CSS0006486 Camellia sinensis var. sinensis HOM05D005827 ORTHO05D005864 3.9e-33 145.2 160 55.0
FAN13G0291 Fragaria x ananassa HOM05D005827 ORTHO05D005864 3.9e-33 145.2 166 55.4
TAR625G0497 Trochodendron aralioides HOM05D005827 ORTHO05D005864 3.9e-33 145.2 133 58.6
TAR625G1254 Trochodendron aralioides HOM05D005827 ORTHO05D005864 3.9e-33 145.2 133 58.6
vmacro14445 Vaccinium macrocarpon HOM05D005827 ORTHO05D005864 6.7e-33 144.4 157 52.2
CANSAT11G0172 Cannabis sativa HOM05D005827 ORTHO05D005864 8.8e-33 144.1 129 62.8
BcaB07g30381 Brassica carinata HOM05D005827 ORTHO05D005864 1.5e-32 143.3 161 55.3
Sp2g13090 Schrenkiella parvula HOM05D005827 ORTHO05D005864 1.5e-32 143.3 161 54.0
BcaC03g17064 Brassica carinata HOM05D005827 ORTHO05D005864 3.3e-32 142.1 161 54.7
A02p32240 Brassica napus HOM05D005827 ORTHO05D005864 3.3e-32 142.1 161 54.7
BolC2t11063H Brassica oleracea HOM05D005827 ORTHO05D005864 3.3e-32 142.1 161 54.7
BraA02t08240Z Brassica rapa HOM05D005827 ORTHO05D005864 3.3e-32 142.1 161 54.7
FvH4_5g29540 Fragaria vesca HOM05D005827 ORTHO05D005864 5.7e-32 141.4 166 55.4
Carub.0005s0059 Capsella rubella HOM05D005827 ORTHO05D005864 9.7e-32 140.6 161 54.0
C02p49840 Brassica napus HOM05D005827 ORTHO05D005864 1.3e-31 140.2 161 54.0
Nn1g04717 Nelumbo nucifera HOM05D005827 ORTHO05D005864 6.3e-31 137.9 132 58.3
PSO170G4182 Papaver somniferum HOM05D005827 ORTHO05D005864 1.1e-30 137.1 156 52.6
Thhalv10005665m.g Eutrema salsugineum HOM05D005827 ORTHO05D005864 4.1e-30 135.2 175 48.0
DCAR_029081 Daucus carota HOM05D005827 ORTHO05D005864 6.9e-30 134.4 150 54.7
Sed0003004 Sechium edule HOM05D005827 ORTHO05D005864 6.9e-30 134.4 161 54.0
Aqoxy5G03364 Aquilegia oxysepala HOM05D005827 ORTHO05D005864 9.1e-30 134.0 158 53.8
ClCG04G002790 Citrullus lanatus HOM05D005827 ORTHO05D005864 9.1e-30 134.0 152 52.0
MD08G1229200 Malus domestica HOM05D005827 ORTHO05D005864 9.1e-30 134.0 133 58.6
Lalb_Chr21g0308391 Lupinus albus HOM05D005827 ORTHO05D005864 2.0e-29 132.9 162 54.3
Lj9A321T79 Lonicera japonica HOM05D005827 ORTHO05D005864 2.6e-29 132.5 198 44.4
PGR042G1992 Punica granatum HOM05D005827 ORTHO05D005864 2.6e-29 132.5 132 59.1
GSVIVG01003168001 Vitis vinifera HOM05D005827 ORTHO05D005864 1.0e-28 130.6 150 54.0
CsaV3_4G029930 Cucumis sativus L. HOM05D005827 ORTHO05D005864 3.8e-28 128.6 160 50.6
MSTRG.27741 Avicennia marina HOM05D005827 ORTHO05D005864 5.0e-28 128.3 147 53.7
PSO210G1068 Papaver somniferum HOM05D005827 ORTHO05D005864 8.5e-28 127.5 156 51.3
EL10Ac9g22299 Beta vulgaris HOM05D005827 ORTHO05D005864 1.9e-27 126.3 154 48.7
Ciclev10030223m.g Citrus clementina HOM05D005827 ORTHO05D005864 7.2e-27 124.4 115 63.5
ECA234G2840 Erigeron canadensis HOM05D005827 ORTHO05D005864 1.6e-26 123.2 134 53.7
AT2G01640 Arabidopsis thaliana HOM05D005827 ORTHO05D005864 2.1e-26 122.9 161 50.3
Glyma.12G113700 Glycine max HOM05D005827 ORTHO05D005864 2.7e-26 122.5 161 50.9
HanXRQChr16g0514881 Helianthus annuus HOM05D005827 ORTHO05D005864 2.7e-26 122.5 157 48.4
Migut.N01172 Erythranthe guttata HOM05D005827 ORTHO05D005864 4.7e-26 121.7 138 53.6
AUR62010278 Chenopodium quinoa HOM05D005827 ORTHO05D005864 7.9e-26 120.9 154 48.1
Ca_30413_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 7.9e-26 120.9 166 51.2
arahy.Tifrunner.gnm1.ann1.M92LVR Arachis hypogaea HOM05D005827 ORTHO05D005864 1.4e-25 120.2 153 52.9
Eucgr.H03226 Eucalyptus grandis HOM05D005827 ORTHO05D005864 2.3e-25 119.4 125 59.2
AL5G10740 Arabidopsis lyrata HOM05D005827 ORTHO05D005864 3.0e-25 119.0 126 54.8
Sc08g0001470 Simmondsia chinensis HOM05D005827 ORTHO05D005864 5.1e-25 118.2 129 52.7
Phvul.007G038800 Phaseolus vulgaris HOM05D005827 ORTHO05D005864 6.7e-25 117.9 161 49.1
TWI31G0230 Tripterygium wilfordii HOM05D005827 ORTHO05D005864 1.5e-24 116.7 155 52.3
arahy.Tifrunner.gnm1.ann1.HL4A43 Arachis hypogaea HOM05D005827 ORTHO05D005864 4.4e-24 115.2 155 51.0
MELO3C003274.2 Cucumis melo HOM05D005827 ORTHO05D005864 5.7e-24 114.8 133 51.9
Lsat_1_v5_gn_5_114720 Lactuca sativa HOM05D005827 ORTHO05D005864 7.4e-24 114.4 141 52.5
SGA_v2.0_scaffold42G16001 Striga asiatica HOM05D005827 ORTHO05D005864 2.8e-23 112.5 161 48.4
SalBow3G3341 Salvia bowleyana HOM05D005827 ORTHO05D005864 2.4e-22 109.4 165 44.8
Aa31LG2G8260 Aethionema arabicum HOM05D005827 ORTHO05D005864 4.1e-22 108.6 153 45.8
TAR381G1673 Trochodendron aralioides HOM05D005827 ORTHO05D005864 7.0e-22 107.8 135 51.9
SGA_v2.0_scaffold393G50707 Striga asiatica HOM05D005827 ORTHO05D005864 1.2e-21 107.1 155 45.8
Zm00001eb133530 Zea mays HOM05D005827 ORTHO05D005864 3.4e-21 105.5 150 46.7
Glyma.20G127400 Glycine max HOM05D005827 ORTHO05D005864 4.5e-21 105.1 161 47.8
Aa31sc215G30 Aethionema arabicum HOM05D005827 ORTHO05D005864 5.9e-21 104.8 118 55.1
Ca_06388_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 7.7e-21 104.4 138 51.4
HPP92_026144 Vanilla planifolia HOM05D005827 ORTHO05D005864 1.3e-20 103.6 145 49.0
Os12g0244500 Oryza sativa ssp. japonica HOM05D005827 ORTHO05D005864 1.7e-20 103.2 129 49.6
MD05G1087800 Malus domestica HOM05D005827 ORTHO05D005864 8.5e-20 100.9 118 50.0
CDE01G0172 Ceratophyllum demersum HOM05D005827 ORTHO05D005864 3.2e-19 99.0 145 44.8
Actinidia00415 Actinidia chinensis HOM05D005827 ORTHO05D005864 7.2e-19 97.8 116 50.0
Hund00127 Selenicereus undatus HOM05D005827 ORTHO05D005864 3.6e-18 95.5 100 57.0
Hund00128 Selenicereus undatus HOM05D005827 ORTHO05D005864 4.7e-18 95.1 101 55.4
Lj5g0000760 Lotus japonicus HOM05D005827 ORTHO05D005864 1.0e-17 94.0 108 52.8
Lj3g0023632 Lotus japonicus HOM05D005827 ORTHO05D005864 8.8e-17 90.9 108 51.9
Nn2g12688 Nelumbo nucifera HOM05D005827 ORTHO05D005864 2.0e-16 89.7 77 61.0
unitig_94.g28296 Utricularia gibba HOM05D005827 ORTHO05D005864 4.4e-16 88.6 152 41.4
unitig_94.g28309 Utricularia gibba HOM05D005827 ORTHO05D005864 4.4e-16 88.6 152 41.4
QL11p034007 Quercus lobata HOM05D005827 ORTHO05D005864 1.8e-14 83.2 100 50.0
ATR0827G109 Amborella trichopoda HOM05D005827 ORTHO05D005864 7.0e-14 81.3 143 41.3
Psat6g219720 Pisum sativum HOM05D005827 ORTHO05D005864 5.9e-13 78.2 163 38.0
ClCG01G025500 Citrullus lanatus HOM05D005827 ORTHO05D005864 1.7e-12 76.6 101 48.5
TPR.G13876 Trifolium pratense HOM05D005827 ORTHO05D005864 2.2e-12 76.3 115 47.8
CiPaw.07G088900 Carya illinoinensis HOM05D005827 ORTHO05D005864 5.0e-12 75.1 91 52.7
MELO3C033554.2 Cucumis melo HOM05D005827 ORTHO05D005864 5.5e-11 71.6 133 39.1
Medtr1g107495 Medicago truncatula HOM05D005827 ORTHO05D005864 2.7e-10 69.3 94 45.7
Zm00001eb350190 Zea mays HOM05D005827 ORTHO05D005864 3.0e-09 65.9 115 42.6
SMO364G0308 Selaginella moellendorffii HOM05D005827 ORTHO05D000003 4.0e-09 65.5 117 38.5
Zm00001eb207600 Zea mays HOM05D005827 ORTHO05D005864 8.8e-09 64.3 86 48.8
Mapoly0052s0016 Marchantia polymorpha HOM05D005827 ORTHO05D005864 1.2e-08 63.9 142 40.1
AUR62039111 Chenopodium quinoa HOM05D005827 ORTHO05D005864 1.5e-08 63.5 74 47.3
SMO364G0554 Selaginella moellendorffii HOM05D005827 ORTHO05D005864 2.6e-08 62.8 116 35.3
Zm00001eb006370 Zea mays HOM05D005827 ORTHO05D005864 3.3e-08 62.4 87 43.7
Pp3c21_2370 Physcomitrium patens HOM05D005827 ORTHO05D005864 4.4e-08 62.0 140 32.1
AUR62044681 Chenopodium quinoa HOM05D005827 ORTHO05D005864 9.7e-08 60.8 104 37.5
SEGI_38856 Sequoiadendron giganteum HOM05D005827 ORTHO05D005864 2.2e-07 59.7 162 31.5
ATR0691G195 Amborella trichopoda HOM05D005827 ORTHO05D005864 2.8e-07 59.3 78 44.9
CANSAT25G3357 Cannabis sativa HOM05D005827 ORTHO05D005864 2.8e-07 59.3 56 57.1
Ah.01g018070 Amaranthus hybridus HOM05D007150 ORTHO05D008994 3.7e-07 58.9 146 35.6
Zm00001eb259520 Zea mays HOM05D005827 ORTHO05D005864 6.3e-07 58.2 106 42.5
Zm00001eb324920 Zea mays HOM05D005827 ORTHO05D005864 8.2e-07 57.8 116 41.4
Zm00001eb324360 Zea mays HOM05D005827 ORTHO05D005864 1.1e-06 57.4 129 38.0
Zm00001eb091410 Zea mays HOM05D005827 ORTHO05D005864 4.1e-06 55.5 106 42.5


User provided reference genes

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