Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra09G0057100 Salix brachista HOM05D006841 ORTHO05D008607 4.7e-288 993.8 500 100.0
Potri.009G075200 Populus trichocarpa HOM05D006841 ORTHO05D008607 2.9e-277 958.0 501 97.0
Manes.02G217600 Manihot esculenta HOM05D006841 ORTHO05D008607 5.9e-230 800.8 510 79.4
Prupe.6G052600 Prunus persica HOM05D006841 ORTHO05D008607 6.1e-219 764.2 506 76.3
COL.COLO4_11072 Corchorus olitorius HOM05D006841 ORTHO05D008607 4.1e-215 751.5 471 79.2
CSS0042618 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 7.0e-215 750.7 509 74.3
MD03G1062600 Malus domestica HOM05D006841 ORTHO05D008607 3.5e-214 748.4 506 74.9
Thecc.09G353800 Theobroma cacao HOM05D006841 ORTHO05D008607 5.9e-214 747.7 508 74.6
MD11G1066200 Malus domestica HOM05D006841 ORTHO05D008607 7.7e-214 747.3 506 74.9
Ciclev10028251m.g Citrus clementina HOM05D006841 ORTHO05D008607 1.6e-211 739.6 473 79.3
Atru.chr3.4145 Acer truncatum HOM05D006841 ORTHO05D008607 4.7e-211 738.0 474 77.6
CiPaw.14G056400 Carya illinoinensis HOM05D006841 ORTHO05D008607 6.1e-211 737.6 510 74.7
RcHm_v2.0_Chr5g0070721 Rosa chinensis HOM05D006841 ORTHO05D008607 1.0e-210 736.9 507 75.1
Duzib170G1072 Durio zibethinus HOM05D006841 ORTHO05D008607 3.0e-210 735.3 508 73.4
Dinv28672 Davidia involucrata HOM05D006841 ORTHO05D008607 1.2e-209 733.4 496 74.6
FAN11G0941 Fragaria x ananassa HOM05D006841 ORTHO05D008607 7.5e-209 730.7 474 77.4
Duzib168G0722 Durio zibethinus HOM05D006841 ORTHO05D008607 9.8e-209 730.3 508 73.0
Phvul.006G071400 Phaseolus vulgaris HOM05D006841 ORTHO05D008607 1.7e-208 729.6 458 78.2
Glyma.18G059800 Glycine max HOM05D006841 ORTHO05D008607 2.2e-208 729.2 514 72.2
FAN21G2904 Fragaria x ananassa HOM05D006841 ORTHO05D008607 2.8e-208 728.8 474 77.2
FvH4_3g39290 Fragaria vesca HOM05D006841 ORTHO05D008607 3.7e-208 728.4 474 77.2
TAR636G1839 Trochodendron aralioides HOM05D006841 ORTHO05D008607 8.3e-208 727.2 468 78.0
FAN25G3694 Fragaria x ananassa HOM05D006841 ORTHO05D008607 1.1e-207 726.9 497 74.0
Gohir.A05G108000 Gossypium hirsutum HOM05D006841 ORTHO05D008607 1.1e-207 726.9 507 72.4
TAR369G0096 Trochodendron aralioides HOM05D006841 ORTHO05D008607 1.1e-207 726.9 471 76.6
Gorai.009G112400 Gossypium raimondii HOM05D006841 ORTHO05D008607 1.4e-207 726.5 507 72.8
ClCG02G019390 Citrullus lanatus HOM05D006841 ORTHO05D008607 2.4e-207 725.7 485 74.4
PGR102G0989 Punica granatum HOM05D006841 ORTHO05D008607 1.6e-206 723.0 515 71.1
TWI79G1747 Tripterygium wilfordii HOM05D006841 ORTHO05D008607 1.6e-206 723.0 476 77.7
Gohir.D05G108200 Gossypium hirsutum HOM05D006841 ORTHO05D008607 2.0e-206 722.6 507 72.4
Eucgr.B02230 Eucalyptus grandis HOM05D006841 ORTHO05D008607 2.7e-206 722.2 510 71.4
Haze_24381 Corylus avellana HOM05D006841 ORTHO05D008607 3.5e-206 721.8 539 70.9
CANSAT54G0320 Cannabis sativa HOM05D006841 ORTHO05D008607 7.8e-206 720.7 465 77.6
CsaV3_6G016010 Cucumis sativus L. HOM05D006841 ORTHO05D008607 7.8e-206 720.7 469 76.5
CSS0014141 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 5.0e-205 718.0 509 71.7
CiPaw.13G073200 Carya illinoinensis HOM05D006841 ORTHO05D008607 5.0e-205 718.0 513 71.3
Glyma.11G167300 Glycine max HOM05D006841 ORTHO05D008607 1.9e-204 716.1 516 71.1
Actinidia34467 Actinidia chinensis HOM05D006841 ORTHO05D008607 3.3e-204 715.3 510 69.8
arahy.Tifrunner.gnm1.ann1.1QT3IR Arachis hypogaea HOM05D006841 ORTHO05D008607 1.2e-203 713.4 454 78.2
MELO3C026835.2 Cucumis melo HOM05D006841 ORTHO05D008607 6.1e-203 711.1 506 71.7
arahy.Tifrunner.gnm1.ann1.UR06JS Arachis hypogaea HOM05D006841 ORTHO05D008607 8.0e-203 710.7 454 77.5
Lj6g0024894 Lotus japonicus HOM05D006841 ORTHO05D008607 2.0e-201 706.1 518 69.7
Oeu018490.1 Olea europaea HOM05D006841 ORTHO05D008607 1.7e-200 703.0 474 73.8
QL01p039597 Quercus lobata HOM05D006841 ORTHO05D008607 2.9e-200 702.2 521 71.6
Sed0019546 Sechium edule HOM05D006841 ORTHO05D008607 6.4e-200 701.0 485 71.8
vmacro14612 Vaccinium macrocarpon HOM05D006841 ORTHO05D008607 6.4e-200 701.0 511 69.3
Lalb_Chr18g0051231 Lupinus albus HOM05D006841 ORTHO05D008607 5.4e-199 698.0 514 70.0
SalBow2G2391 Salvia bowleyana HOM05D006841 ORTHO05D008607 1.2e-198 696.8 449 76.6
Rhsim01G0239400 Rhododendron simsii HOM05D006841 ORTHO05D008607 1.0e-197 693.7 510 70.2
TPR.G32925 Trifolium pratense HOM05D006841 ORTHO05D008607 2.1e-195 686.0 509 69.7
Medtr3g465390 Medicago truncatula HOM05D006841 ORTHO05D008607 2.8e-195 685.6 513 69.4
VMungo0540G0160 Vigna mungo HOM05D006841 ORTHO05D008607 1.4e-194 683.3 428 78.7
Psat5g157440 Pisum sativum HOM05D006841 ORTHO05D008607 6.8e-194 681.0 442 75.3
MSTRG.12683 Avicennia marina HOM05D006841 ORTHO05D008607 3.7e-192 675.2 453 74.0
Solyc05g012140.3 Solanum lycopersicum HOM05D006841 ORTHO05D008607 3.2e-191 672.2 459 72.8
Sopen05g006930 Solanum pennellii HOM05D006841 ORTHO05D008607 4.1e-191 671.8 459 72.8
Sc06g0008150 Simmondsia chinensis HOM05D006841 ORTHO05D008607 3.0e-189 665.6 504 67.5
PGSC0003DMG401028313 Solanum tuberosum HOM05D006841 ORTHO05D008607 1.9e-188 662.9 459 72.3
Lj2A1088G41 Lonicera japonica HOM05D006841 ORTHO05D008607 1.6e-187 659.8 434 74.7
HanXRQChr01g0011601 Helianthus annuus HOM05D006841 ORTHO05D008607 1.1e-186 657.1 488 67.0
EL10Ac7g15887 Beta vulgaris HOM05D006841 ORTHO05D008607 2.3e-186 656.0 448 72.3
Peaxi162Scf01324g00238 Petunia axillaris HOM05D006841 ORTHO05D008607 6.8e-186 654.4 450 71.8
AUR62009700 Chenopodium quinoa HOM05D006841 ORTHO05D008607 1.5e-185 653.3 468 69.7
AUR62036246 Chenopodium quinoa HOM05D006841 ORTHO05D008607 2.6e-185 652.5 468 69.7
Migut.N00773 Erythranthe guttata HOM05D006841 ORTHO05D008607 3.7e-184 648.7 438 72.1
CAN.G707.10 Capsicum annuum HOM05D006841 ORTHO05D008607 8.3e-184 647.5 504 65.9
Hund05042 Selenicereus undatus HOM05D006841 ORTHO05D008607 2.4e-183 646.0 458 69.7
Ah.15g096690 Amaranthus hybridus HOM05D006841 ORTHO05D008607 7.8e-182 641.0 476 67.0
Aqoxy1G01268 Aquilegia oxysepala HOM05D006841 ORTHO05D008607 1.3e-181 640.2 428 74.3
Ca_14982_v3 Cicer arietinum L. HOM05D006841 ORTHO05D008607 1.4e-178 630.2 486 67.3
Lsat_1_v5_gn_5_173260 Lactuca sativa HOM05D006841 ORTHO05D008607 3.1e-178 629.0 421 72.2
unitig_94.g28363 Utricularia gibba HOM05D006841 ORTHO05D008607 3.4e-177 625.5 439 70.8
PSO017G2874 Papaver somniferum HOM05D006841 ORTHO05D008607 1.3e-176 623.6 461 69.2
PSO349G0316 Papaver somniferum HOM05D006841 ORTHO05D008607 1.2e-174 617.1 507 64.7
THA.LOC104800754 Tarenaya hassleriana HOM05D006841 ORTHO05D008607 1.6e-174 616.7 513 62.2
Ah.08g215320 Amaranthus hybridus HOM05D006841 ORTHO05D008607 7.8e-174 614.4 468 65.6
AT2G30100 Arabidopsis thaliana HOM05D006841 ORTHO05D008607 3.9e-173 612.1 514 62.5
ECA248G2088 Erigeron canadensis HOM05D006841 ORTHO05D008607 3.9e-173 612.1 412 72.1
MBI15_g21765_MAGBIO Magnolia biondii HOM05D006841 ORTHO05D008607 8.7e-173 610.9 506 63.0
Carub.0004s1120 Capsella rubella HOM05D006841 ORTHO05D008607 3.6e-171 605.5 516 60.7
Aa31LG5G6580 Aethionema arabicum HOM05D006841 ORTHO05D008607 1.4e-170 603.6 459 65.4
Thhalv10016546m.g Eutrema salsugineum HOM05D006841 ORTHO05D008607 1.2e-169 600.5 512 61.5
CARHR123400 Cardamine hirsuta HOM05D006841 ORTHO05D008607 1.5e-169 600.1 515 60.8
AL4G24870 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 2.0e-169 599.7 476 64.1
CDE06G2104 Ceratophyllum demersum HOM05D006841 ORTHO05D008607 1.7e-168 596.7 459 64.3
Sp4g12660 Schrenkiella parvula HOM05D006841 ORTHO05D008607 2.9e-168 595.9 512 61.3
BraA04t17817Z Brassica rapa HOM05D006841 ORTHO05D008607 2.4e-167 592.8 521 58.9
A04p22780 Brassica napus HOM05D006841 ORTHO05D008607 7.1e-167 591.3 519 59.0
SGA_v2.0_scaffold104G30129 Striga asiatica HOM05D006841 ORTHO05D008607 2.1e-166 589.7 479 62.6
BolC4t27410H Brassica oleracea HOM05D006841 ORTHO05D008607 2.7e-166 589.3 516 59.5
C04p58980 Brassica napus HOM05D006841 ORTHO05D008607 4.6e-166 588.6 516 59.9
BcaC02g08056 Brassica carinata HOM05D006841 ORTHO05D008607 2.4e-162 576.2 505 59.6
GSVIVG01024686001 Vitis vinifera HOM05D006841 ORTHO05D008607 6.4e-160 568.2 380 76.3
Cc01_g14600 Coffea canephora HOM05D006841 ORTHO05D008607 1.6e-155 553.5 397 69.8
DCAR_007349 Daucus carota HOM05D006841 ORTHO05D008607 7.6e-153 544.7 353 74.5
Zm00001eb286480 Zea mays HOM05D006841 ORTHO05D008607 1.0e-144 517.7 420 60.2
Os05g0353300 Oryza sativa ssp. japonica HOM05D006841 ORTHO05D008607 6.5e-144 515.0 459 57.1
ATR0174G035 Amborella trichopoda HOM05D006841 ORTHO05D008607 1.5e-140 503.8 421 60.3
AL59U10050 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 1.6e-126 457.2 455 56.0
Actinidia23875 Actinidia chinensis HOM05D006841 ORTHO05D008607 2.0e-124 450.3 296 74.3
HPP92_025104 Vanilla planifolia HOM05D006841 ORTHO05D008607 1.5e-111 407.5 381 56.2
SEGI_38470 Sequoiadendron giganteum HOM05D006841 ORTHO05D008607 9.4e-111 404.8 423 48.5
Hma1.2p1_0146F.1_g065520 Hydrangea macrophylla HOM05D006841 ORTHO05D008607 1.2e-110 404.4 257 75.9
Mapoly0068s0098 Marchantia polymorpha HOM05D006841 ORTHO05D008607 9.5e-95 351.7 447 43.0
CSS0012316 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 2.6e-92 343.6 422 49.5
Nn2g10947 Nelumbo nucifera HOM05D006841 ORTHO05D008607 7.8e-89 332.0 259 67.2
Nn2g13216 Nelumbo nucifera HOM05D006841 ORTHO05D008607 1.4e-82 311.2 238 68.5
Pp3c12_8330 Physcomitrium patens HOM05D006841 ORTHO05D008607 9.5e-71 271.9 424 38.0
Cpa.g.sc2.394 Carica papaya HOM05D006841 ORTHO05D008607 4.4e-68 263.1 150 86.0
SMO304G0125 Selaginella moellendorffii HOM05D006841 ORTHO05D008607 1.7e-64 251.1 428 35.3
MD11G1194000 Malus domestica HOM05D006841 ORTHO05D008607 4.7e-62 243.0 155 80.0
Oeu034210.1 Olea europaea HOM05D009051 ORTHO05D000140 7.1e-50 202.6 171 59.6
Oeu034517.1 Olea europaea HOM05D006841 ORTHO05D008607 1.3e-38 165.2 228 45.2
AagrBONN_evm.TU.Sc2ySwM_117.787 Anthoceros agrestis HOM05D006841 ORTHO05D008607 2.4e-37 161.0 207 42.0
Oeu034513.1 Olea europaea HOM05D006841 ORTHO05D008607 3.1e-37 160.6 228 42.5
Oeu034514.1 Olea europaea HOM05D006841 ORTHO05D008607 4.2e-34 150.2 126 61.9
Oeu034518.1 Olea europaea HOM05D006841 ORTHO05D008607 7.9e-33 146.0 148 54.7
VMungo0331G0799 Vigna mungo HOM05D000172 ORTHO05D004529 7.6e-28 129.4 107 60.7
Oeu019495.1 Olea europaea HOM05D006841 ORTHO05D008607 2.5e-18 97.8 143 38.5


User provided reference genes

Program Settings