Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra09G0053400 Salix brachista HOM05D004084 ORTHO05D004662 4.3e-104 381.3 191 100.0
Potri.009G070600 Populus trichocarpa HOM05D004084 ORTHO05D004662 8.6e-81 303.9 251 66.9
Potri.001G275900 Populus trichocarpa HOM05D004084 ORTHO05D004662 2.2e-76 289.3 249 65.1
Manes.02G139800 Manihot esculenta HOM05D004084 ORTHO05D004662 1.5e-69 266.5 251 60.6
CANSAT54G0855 Cannabis sativa HOM05D004084 ORTHO05D004662 1.1e-67 260.4 253 57.7
Prupe.4G267100 Prunus persica HOM05D004084 ORTHO05D004662 1.6e-66 256.5 253 56.5
RcHm_v2.0_Chr5g0050631 Rosa chinensis HOM05D004084 ORTHO05D004662 1.0e-65 253.8 254 56.3
Thecc.09G249200 Theobroma cacao HOM05D004084 ORTHO05D004662 3.9e-65 251.9 248 60.5
Cfa009849 Carpinus fangiana HOM05D004084 ORTHO05D004662 9.6e-64 247.3 246 57.3
FAN21G2250 Fragaria x ananassa HOM05D004084 ORTHO05D004662 4.0e-62 241.9 247 55.9
Duzib168G1105 Durio zibethinus HOM05D004084 ORTHO05D004662 9.0e-62 240.7 253 56.5
Ciclev10016417m.g Citrus clementina HOM05D004084 ORTHO05D004662 1.2e-61 240.4 246 55.7
FvH4_3g27900 Fragaria vesca HOM05D004084 ORTHO05D004662 2.6e-61 239.2 247 56.3
MD11G1185700 Malus domestica HOM05D004084 ORTHO05D004662 5.8e-61 238.0 229 57.2
CiPaw.14G113600 Carya illinoinensis HOM05D004084 ORTHO05D004662 2.9e-60 235.7 249 55.0
FAN16G3201 Fragaria x ananassa HOM05D004084 ORTHO05D004662 4.9e-60 235.0 247 55.5
Dinv05100 Davidia involucrata HOM05D004084 ORTHO05D004662 8.4e-60 234.2 247 56.7
Atru.chr3.2757 Acer truncatum HOM05D004084 ORTHO05D004662 2.4e-59 232.6 246 53.7
FAN25G0474 Fragaria x ananassa HOM05D004084 ORTHO05D004662 4.2e-59 231.9 247 54.7
Duzib150G1594 Durio zibethinus HOM05D004084 ORTHO05D004662 5.5e-59 231.5 253 54.9
Glyma.20G037400 Glycine max HOM05D004084 ORTHO05D004662 6.0e-58 228.0 252 54.8
Atru.chr4.1902 Acer truncatum HOM05D004084 ORTHO05D004662 7.9e-58 227.6 221 57.0
Glyma.07G230600 Glycine max HOM05D004084 ORTHO05D004662 1.8e-57 226.5 256 53.9
Gohir.D13G222800 Gossypium hirsutum HOM05D004084 ORTHO05D004662 3.0e-57 225.7 253 53.0
Gohir.A13G219100 Gossypium hirsutum HOM05D004084 ORTHO05D004662 5.1e-57 224.9 246 53.3
GSVIVG01037269001 Vitis vinifera HOM05D004084 ORTHO05D004662 1.5e-56 223.4 250 52.4
VMungo0540G1882 Vigna mungo HOM05D004084 ORTHO05D004662 1.9e-56 223.0 251 53.4
Gorai.013G253900 Gossypium raimondii HOM05D004084 ORTHO05D004662 2.5e-56 222.6 253 52.2
Dinv36171 Davidia involucrata HOM05D004084 ORTHO05D004662 2.1e-55 219.5 252 54.8
Ca_03985_v3 Cicer arietinum L. HOM05D004084 ORTHO05D004662 2.4e-54 216.1 246 54.9
Nitab4.5_0000718g0220 Nicotiana tabacum HOM05D004084 ORTHO05D004662 1.5e-53 213.4 253 52.2
TWI79G0099 Tripterygium wilfordii HOM05D004084 ORTHO05D004662 2.0e-53 213.0 246 51.2
Phvul.006G030700 Phaseolus vulgaris HOM05D004084 ORTHO05D004662 2.6e-53 212.6 235 53.2
Hma1.2p1_0129F.1_g060160 Hydrangea macrophylla HOM05D004084 ORTHO05D004662 3.4e-53 212.2 250 52.8
TAR623G1229 Trochodendron aralioides HOM05D004084 ORTHO05D004662 4.5e-53 211.8 234 52.1
Nitab4.5_0012538g0010 Nicotiana tabacum HOM05D004084 ORTHO05D004662 5.8e-53 211.5 252 52.0
Peaxi162Scf00004g04520 Petunia axillaris HOM05D004084 ORTHO05D004662 7.6e-53 211.1 232 53.9
Eucgr.B03731 Eucalyptus grandis HOM05D004084 ORTHO05D004662 1.7e-52 209.9 252 51.6
ClCG02G022880 Citrullus lanatus HOM05D004084 ORTHO05D004662 3.8e-52 208.8 232 52.6
Oeu016695.1 Olea europaea HOM05D004084 ORTHO05D004662 4.9e-52 208.4 209 54.5
PGSC0003DMG400009461 Solanum tuberosum HOM05D004084 ORTHO05D004662 6.5e-52 208.0 233 53.6
Rhsim13G0210600 Rhododendron simsii HOM05D004084 ORTHO05D004662 1.1e-51 207.2 234 51.7
Psat5g181240 Pisum sativum HOM05D004084 ORTHO05D004662 1.4e-51 206.8 260 48.5
Sopen11g024490 Solanum pennellii HOM05D004084 ORTHO05D004662 1.9e-51 206.5 233 53.6
MSTRG.21348 Avicennia marina HOM05D004084 ORTHO05D004662 2.5e-51 206.1 208 55.8
HanXRQChr14g0432231 Helianthus annuus HOM05D004084 ORTHO05D004662 2.5e-51 206.1 255 51.4
Solyc11g064830.2 Solanum lycopersicum HOM05D004084 ORTHO05D004662 2.5e-51 206.1 233 53.2
CsaV3_6G039010 Cucumis sativus L. HOM05D004084 ORTHO05D004662 1.2e-50 203.8 227 53.3
MELO3C014562.2 Cucumis melo HOM05D004084 ORTHO05D004662 1.6e-50 203.4 225 52.4
MSTRG.17633 Avicennia marina HOM05D004084 ORTHO05D004662 7.9e-50 201.1 240 52.1
Cc08_g06320 Coffea canephora HOM05D004084 ORTHO05D004662 7.9e-50 201.1 216 54.6
PGSC0003DMG400022698 Solanum tuberosum HOM05D004084 ORTHO05D004662 1.3e-49 200.3 252 50.8
Gohir.D09G106500 Gossypium hirsutum HOM05D004084 ORTHO05D004662 1.8e-49 199.9 254 49.2
Gorai.006G124000 Gossypium raimondii HOM05D004084 ORTHO05D004662 1.8e-49 199.9 254 48.8
CARHR200800 Cardamine hirsuta HOM05D004084 ORTHO05D004662 3.9e-49 198.7 254 47.2
Thhalv10014482m.g Eutrema salsugineum HOM05D004084 ORTHO05D004662 3.9e-49 198.7 254 48.0
MSTRG.17516 Avicennia marina HOM05D004084 ORTHO05D004662 6.7e-49 198.0 197 57.4
Lj1A284G15 Lonicera japonica HOM05D004084 ORTHO05D004662 1.1e-48 197.2 211 56.4
PGR102G0788 Punica granatum HOM05D004084 ORTHO05D004662 1.1e-48 197.2 246 50.0
TWI75G0849 Tripterygium wilfordii HOM05D004084 ORTHO05D004662 1.1e-48 197.2 269 46.5
Sp6g31330 Schrenkiella parvula HOM05D004084 ORTHO05D004662 1.9e-48 196.4 247 47.8
Hund07438 Selenicereus undatus HOM05D004084 ORTHO05D004662 1.9e-48 196.4 255 46.7
Solyc01g008810.3 Solanum lycopersicum HOM05D004084 ORTHO05D004662 1.9e-48 196.4 238 52.1
arahy.Tifrunner.gnm1.ann1.X3DJVQ Arachis hypogaea HOM05D004084 ORTHO05D004662 2.5e-48 196.1 238 51.3
HanXRQChr06g0182501 Helianthus annuus HOM05D004084 ORTHO05D004662 2.5e-48 196.1 248 49.6
Nitab4.5_0001500g0060 Nicotiana tabacum HOM05D001938 ORTHO05D004662 3.3e-48 195.7 221 53.8
Sed0020433 Sechium edule HOM05D004084 ORTHO05D004662 4.3e-48 195.3 222 51.8
Sopen01g004320 Solanum pennellii HOM05D004084 ORTHO05D004662 4.3e-48 195.3 238 52.1
Gohir.A09G110200 Gossypium hirsutum HOM05D004084 ORTHO05D004662 5.7e-48 194.9 254 48.8
ECA238G4029 Erigeron canadensis HOM05D004084 ORTHO05D004662 2.1e-47 193.0 223 51.1
Migut.N02373 Erythranthe guttata HOM05D004084 ORTHO05D004662 2.1e-47 193.0 213 55.9
MBI13_g27798_MAGBIO Magnolia biondii HOM05D004084 ORTHO05D004662 2.1e-47 193.0 207 53.1
SGA_v2.0_scaffold29G12252 Striga asiatica HOM05D004084 ORTHO05D004662 2.8e-47 192.6 217 52.5
Nitab4.5_0000730g0060 Nicotiana tabacum HOM05D001938 ORTHO05D004662 3.7e-47 192.2 229 51.5
Oeu025904.1 Olea europaea HOM05D004084 ORTHO05D004662 6.3e-47 191.4 228 52.2
Lalb_Chr10g0106291 Lupinus albus HOM05D004084 ORTHO05D004662 1.4e-46 190.3 304 43.4
EL10Ac4g10147 Beta vulgaris HOM05D004084 ORTHO05D004662 9.0e-46 187.6 250 46.4
Ah.04g161980 Amaranthus hybridus HOM05D004084 ORTHO05D004662 2.0e-45 186.4 247 47.0
Carub.0006s1082 Capsella rubella HOM05D004084 ORTHO05D004662 2.0e-45 186.4 255 46.7
Aa31LG3G14920 Aethionema arabicum HOM05D004084 ORTHO05D004662 2.6e-45 186.0 253 46.6
Lsat_1_v5_gn_2_32240 Lactuca sativa HOM05D004084 ORTHO05D004662 3.4e-45 185.7 288 44.4
MBI19_g16738_MAGBIO Magnolia biondii HOM05D004084 ORTHO05D004662 3.4e-45 185.7 199 54.3
AT5G12310 Arabidopsis thaliana HOM05D004084 ORTHO05D004662 1.3e-44 183.7 239 48.1
PGR119G1682 Punica granatum HOM05D004084 ORTHO05D004662 1.3e-44 183.7 245 46.1
PGR123G0005 Punica granatum HOM05D004084 ORTHO05D004662 1.3e-44 183.7 245 46.1
Lj6g0014777 Lotus japonicus HOM05D004084 ORTHO05D004662 1.7e-44 183.3 224 50.4
Migut.D00657 Erythranthe guttata HOM05D004084 ORTHO05D004662 2.9e-44 182.6 240 49.2
Actinidia06961 Actinidia chinensis HOM05D004084 ORTHO05D004662 1.9e-43 179.9 187 56.1
Peaxi162Scf00032g02420 Petunia axillaris HOM05D004084 ORTHO05D004662 3.2e-43 179.1 240 48.8
Sc06g0004680 Simmondsia chinensis HOM05D004084 ORTHO05D004662 3.2e-43 179.1 238 47.5
THA.LOC104824623 Tarenaya hassleriana HOM05D004084 ORTHO05D004662 4.2e-43 178.7 241 45.6
Os01g0954400 Oryza sativa ssp. japonica HOM05D004084 ORTHO05D004662 7.2e-43 177.9 217 48.4
Sp6g24980 Schrenkiella parvula HOM05D004084 ORTHO05D004662 9.3e-43 177.6 249 43.8
Zm00001eb140640 Zea mays HOM05D004084 ORTHO05D004662 1.3e-39 167.2 229 44.5
BcaB01g05145 Brassica carinata HOM05D004084 ORTHO05D004662 1.6e-39 166.8 239 43.9
A03p09480 Brassica napus HOM05D004084 ORTHO05D004662 1.6e-39 166.8 239 43.9
C03p11060 Brassica napus HOM05D004084 ORTHO05D004662 1.6e-39 166.8 239 43.9
BolC3t13575H Brassica oleracea HOM05D004084 ORTHO05D004662 1.6e-39 166.8 239 43.9
BraA03t10266Z Brassica rapa HOM05D004084 ORTHO05D004662 2.2e-39 166.4 240 43.8
Haze_23226 Corylus avellana HOM05D004084 ORTHO05D004662 2.8e-39 166.0 181 55.2
AT5G19430 Arabidopsis thaliana HOM05D004084 ORTHO05D004662 1.8e-38 163.3 228 45.6
ATR0680G173 Amborella trichopoda HOM05D004084 ORTHO05D004662 2.4e-38 162.9 207 47.8
PSO339G4433 Papaver somniferum HOM05D004084 ORTHO05D004662 3.1e-38 162.5 212 46.7
COL.COLO4_35673 Corchorus olitorius HOM05D004084 ORTHO05D004662 6.9e-38 161.4 183 53.6
A03p05580 Brassica napus HOM05D004084 ORTHO05D004662 1.5e-37 160.2 249 41.0
QL01p017232 Quercus lobata HOM05D004084 ORTHO05D004662 2.0e-37 159.8 182 51.6
SGA_v2.0_scaffold310G48197 Striga asiatica HOM05D004084 ORTHO05D004662 2.0e-37 159.8 232 44.0
BolC9t59292H Brassica oleracea HOM05D004084 ORTHO05D004662 7.7e-37 157.9 240 42.5
SGA_v2.0_scaffold8G04547 Striga asiatica HOM05D001938 ORTHO05D001965 7.7e-37 157.9 176 56.2
DCAR_023764 Daucus carota HOM05D000857 ORTHO05D004662 1.7e-36 156.8 181 53.6
Carub.0006s1777 Capsella rubella HOM05D004084 ORTHO05D004662 2.9e-36 156.0 247 42.1
MD03G1166700 Malus domestica HOM05D004084 ORTHO05D004662 3.8e-36 155.6 108 66.7
BraA10t44615Z Brassica rapa HOM05D004084 ORTHO05D004662 3.2e-35 152.5 240 42.5
BolC3t13153H Brassica oleracea HOM05D004084 ORTHO05D004662 1.6e-34 150.2 192 41.7
C09p64590 Brassica napus HOM05D004084 ORTHO05D004662 2.1e-34 149.8 240 41.7
BraA03t09895Z Brassica rapa HOM05D004084 ORTHO05D004662 3.6e-34 149.1 186 41.9
arahy.Tifrunner.gnm1.ann1.6L2V6B Arachis hypogaea HOM05D004084 ORTHO05D004662 4.6e-34 148.7 249 42.6
Actinidia16378 Actinidia chinensis HOM05D004084 ORTHO05D004662 1.0e-33 147.5 104 67.3
A10p25510 Brassica napus HOM05D004084 ORTHO05D004662 1.0e-33 147.5 241 41.5
Thhalv10014461m.g Eutrema salsugineum HOM05D004084 ORTHO05D004662 1.8e-33 146.7 249 38.6
C03p06530 Brassica napus HOM05D004084 ORTHO05D004662 3.9e-33 145.6 250 37.6
CSS0038115 Camellia sinensis var. sinensis HOM05D004084 ORTHO05D004662 1.1e-32 144.1 106 64.2
unitig_8.g3650 Utricularia gibba HOM05D004084 ORTHO05D000654 2.0e-32 143.3 202 45.0
BcaNung06777 Brassica carinata HOM05D004084 ORTHO05D004662 9.7e-32 141.0 237 39.2
Hund21983 Selenicereus undatus HOM05D004084 ORTHO05D004662 2.8e-31 139.4 194 45.9
Aqoxy2G00377 Aquilegia oxysepala HOM05D004084 ORTHO05D004662 6.3e-31 138.3 173 52.6
PSO384G1598 Papaver somniferum HOM05D004084 ORTHO05D004662 1.8e-30 136.7 215 44.2
Pp3c26_14330 Physcomitrium patens HOM05D004084 ORTHO05D004662 5.3e-30 135.2 187 44.9
HPP92_006725 Vanilla planifolia HOM05D004084 ORTHO05D004662 2.6e-29 132.9 161 44.7
AL6G30920 Arabidopsis lyrata HOM05D004084 ORTHO05D004662 4.5e-29 132.1 201 43.8
SEGI_38021 Sequoiadendron giganteum HOM05D004084 ORTHO05D004662 1.0e-28 131.0 175 46.9
SEGI_32483 Sequoiadendron giganteum HOM05D004084 ORTHO05D004662 1.6e-26 123.6 169 41.4
BcaB01g04862 Brassica carinata HOM05D004084 ORTHO05D004662 2.7e-26 122.9 219 38.4
CARHR193510 Cardamine hirsuta HOM05D004084 ORTHO05D004662 4.7e-26 122.1 193 42.0
AagrBONN_evm.TU.Sc2ySwM_228.3727 Anthoceros agrestis HOM05D004084 ORTHO05D004662 3.0e-25 119.4 134 43.3
TPR.G27271 Trifolium pratense HOM05D004084 ORTHO05D004662 3.0e-25 119.4 96 72.9
MD03G1166600 Malus domestica HOM05D004084 ORTHO05D004662 8.8e-25 117.9 93 73.1
Sabra16G0170200 Salix brachista HOM05D004084 ORTHO05D004662 1.1e-24 117.5 89 75.3
Nn7g36697 Nelumbo nucifera HOM05D004084 ORTHO05D004662 2.6e-24 116.3 65 80.0
CDE11G0350 Ceratophyllum demersum HOM05D004084 ORTHO05D004662 2.2e-23 113.2 76 67.1
Phvul.006G030800 Phaseolus vulgaris HOM05D004084 ORTHO05D004662 4.8e-23 112.1 96 66.7
SMO337G0017 Selaginella moellendorffii HOM05D004084 ORTHO05D004662 8.2e-23 111.3 219 35.2
CSS0029213 Camellia sinensis var. sinensis HOM05D004084 ORTHO05D004662 1.4e-22 110.5 94 72.3
arahy.Tifrunner.gnm1.ann1.QA9X4A Arachis hypogaea HOM05D004084 ORTHO05D004662 1.8e-22 110.2 95 72.6
Oeu061709.1 Olea europaea HOM05D004084 ORTHO05D004662 4.1e-22 109.0 97 68.0
Cc00_g22040 Coffea canephora HOM05D004084 ORTHO05D004662 2.0e-21 106.7 88 55.7
CSS0040984 Camellia sinensis var. sinensis HOM05D004084 ORTHO05D004662 5.9e-21 105.1 95 70.5
CBR_g131 Chara braunii HOM05D004084 ORTHO05D004662 3.8e-20 102.4 218 33.9
CDE11G0877 Ceratophyllum demersum HOM05D004084 ORTHO05D004662 8.5e-20 101.3 182 37.9
AUR62000187 Chenopodium quinoa HOM05D004084 ORTHO05D004662 2.5e-19 99.8 101 62.4
BcaB01g05406 Brassica carinata HOM05D004084 ORTHO05D004662 4.2e-19 99.0 214 37.4
AUR62006538 Chenopodium quinoa HOM05D001938 ORTHO05D001965 1.4e-17 94.0 104 59.6
AL6G23110 Arabidopsis lyrata HOM05D004084 ORTHO05D004662 2.0e-16 90.1 95 62.1
Cre13.g604750 Chlamydomonas reinhardtii HOM05D004084 ORTHO05D004662 2.6e-16 89.7 62 59.7
Haze_23225 Corylus avellana HOM05D004084 ORTHO05D004662 4.1e-14 82.4 66 59.1
Pp3c4_28300 Physcomitrium patens HOM05D004084 ORTHO05D004662 3.5e-13 79.3 53 62.3
QL01p017234 Quercus lobata HOM05D004084 ORTHO05D004662 1.7e-12 77.0 81 50.6
PRCOL_00000691 Prasinoderma coloniale HOM05D004084 ORTHO05D004662 8.5e-12 74.7 97 39.2
SalBow6G0813 Salvia bowleyana HOM05D004084 ORTHO05D004662 5.5e-11 72.0 75 61.3
SHI55208 Sapria himalayana HOM05D004084 ORTHO05D004662 1.6e-10 70.5 83 57.8
Nn7g36696 Nelumbo nucifera HOM05D004084 ORTHO05D004662 2.7e-10 69.7 42 76.2
COL.COLO4_35674 Corchorus olitorius HOM05D004084 ORTHO05D004662 4.7e-10 68.9 69 56.5
CDE11G0903 Ceratophyllum demersum HOM05D004084 ORTHO05D004662 6.8e-09 65.1 164 31.7
CARHR193520 Cardamine hirsuta HOM05D004084 ORTHO05D004662 8.8e-09 64.7 57 57.9
MBI19_g25614_MAGBIO Magnolia biondii HOM05D004084 ORTHO05D004662 1.2e-08 64.3 34 73.5
CSS0027788 Camellia sinensis var. sinensis HOM05D004084 ORTHO05D004662 5.7e-08 62.0 65 52.3
EL10Ac8g18304 Beta vulgaris HOM05D004084 ORTHO05D004662 1.7e-07 60.5 52 46.2
Ah.13g074550 Amaranthus hybridus HOM05D007775 ORTHO05D009858 4.8e-07 58.9 66 40.9
MBI14_g20318_MAGBIO Magnolia biondii HOM05D004084 ORTHO05D017722 4.8e-07 58.9 34 67.6
arahy.Tifrunner.gnm1.ann1.F7NEFJ Arachis hypogaea HOM05D004084 ORTHO05D004662 1.4e-06 57.4 49 73.5
arahy.Tifrunner.gnm1.ann1.K0L3ZW Arachis hypogaea HOM05D004084 ORTHO05D004662 1.4e-06 57.4 49 73.5
Ciclev10005542m.g Citrus clementina HOM05D007775 ORTHO05D009858 1.8e-06 57.0 47 46.8
QL06p007731 Quercus lobata HOM05D007775 ORTHO05D009858 5.4e-06 55.5 102 32.4
arahy.Tifrunner.gnm1.ann1.57BBZ5 Arachis hypogaea HOM05D004084 ORTHO05D004662 9.1e-06 54.7 29 86.2


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