Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra09G0052500 Salix brachista HOM05D006694 ORTHO05D008240 6.7e-75 285.8 525 100.0
Potri.009G069600 Populus trichocarpa HOM05D006694 ORTHO05D008240 8.8e-43 179.1 101 88.1
Manes.01G178400 Manihot esculenta HOM05D006694 ORTHO05D008240 1.4e-16 92.0 98 57.1
QL01p017030 Quercus lobata HOM05D006694 ORTHO05D008240 9.2e-16 89.4 103 50.5
Atru.chr3.2947 Acer truncatum HOM05D006694 ORTHO05D008240 7.8e-15 86.3 95 53.7
Atru.chr3.2963 Acer truncatum HOM05D006694 ORTHO05D008240 7.8e-15 86.3 95 53.7
MD08G1215500 Malus domestica HOM05D006694 ORTHO05D008240 1.3e-14 85.5 99 54.5
CiPaw.14G112300 Carya illinoinensis HOM05D006694 ORTHO05D008240 3.9e-14 84.0 85 52.9
Cfa011326 Carpinus fangiana HOM05D006694 ORTHO05D008240 6.6e-14 83.2 76 56.6
Hma1.2p1_1099F.1_g256830 Hydrangea macrophylla HOM05D006694 ORTHO05D008240 1.5e-13 82.0 86 53.5
FAN25G2919 Fragaria x ananassa HOM05D006694 ORTHO05D008240 2.1e-12 78.2 88 50.0
FvH4_3g35120 Fragaria vesca HOM05D006694 ORTHO05D008240 3.6e-12 77.4 88 50.0
FAN21G3540 Fragaria x ananassa HOM05D006694 ORTHO05D008240 3.6e-12 77.4 88 50.0
FAN11G2736 Fragaria x ananassa HOM05D006694 ORTHO05D008240 4.7e-12 77.0 89 50.6
Cfa009864 Carpinus fangiana HOM05D006694 ORTHO05D008240 8.1e-12 76.3 98 48.0
RcHm_v2.0_Chr5g0048941 Rosa chinensis HOM05D006694 ORTHO05D008240 8.1e-12 76.3 88 50.0
Sc16g0011010 Simmondsia chinensis HOM05D006694 ORTHO05D008240 1.8e-11 75.1 96 40.6
Haze_23236 Corylus avellana HOM05D006694 ORTHO05D008240 3.1e-11 74.3 76 51.3
Lalb_Chr10g0096081 Lupinus albus HOM05D006694 ORTHO05D008240 1.2e-10 72.4 89 44.9
RcHm_v2.0_Chr7g0231581 Rosa chinensis HOM05D006694 ORTHO05D008240 2.0e-10 71.6 72 51.4
FAN08G0107 Fragaria x ananassa HOM05D006694 ORTHO05D008240 7.5e-10 69.7 95 42.1
THA.LOC104800448 Tarenaya hassleriana HOM05D006694 ORTHO05D008240 1.3e-09 68.9 94 51.1
FvH4_5g33200 Fragaria vesca HOM05D006694 ORTHO05D008240 2.2e-09 68.2 78 47.4
FAN18G4320 Fragaria x ananassa HOM05D006694 ORTHO05D008240 2.2e-09 68.2 78 47.4
TWI79G1258 Tripterygium wilfordii HOM05D006694 ORTHO05D008240 2.2e-09 68.2 100 46.0
Dinv15034 Davidia involucrata HOM05D006694 ORTHO05D008240 8.3e-09 66.2 53 62.3
PGSC0003DMG400022317 Solanum tuberosum HOM05D006694 ORTHO05D008240 2.4e-08 64.7 52 63.5
CSS0033907 Camellia sinensis var. sinensis HOM05D006694 ORTHO05D008240 3.2e-08 64.3 75 45.3
Ciclev10014456m.g Citrus clementina HOM05D006694 ORTHO05D008240 3.2e-08 64.3 76 55.3
Haze_23854 Corylus avellana HOM05D006694 ORTHO05D008240 4.1e-08 63.9 58 56.9
PGR031G0070 Punica granatum HOM05D006694 ORTHO05D008240 5.4e-08 63.5 75 44.0
ClCG03G012530 Citrullus lanatus HOM05D006694 ORTHO05D008240 7.1e-08 63.2 76 43.4
Sed0016136 Sechium edule HOM05D006694 ORTHO05D008240 7.1e-08 63.2 76 43.4
Solyc07g064625.1 Solanum lycopersicum HOM05D006694 ORTHO05D008240 7.1e-08 63.2 52 61.5
Sopen07g032820 Solanum pennellii HOM05D006694 ORTHO05D008240 7.1e-08 63.2 52 61.5
Aa31sc233G60 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.2e-07 62.4 47 61.7
Nitab4.5_0000730g0020 Nicotiana tabacum HOM05D006694 ORTHO05D008240 1.2e-07 62.4 74 41.9
Nitab4.5_0001500g0030 Nicotiana tabacum HOM05D006694 ORTHO05D008240 1.2e-07 62.4 74 41.9
MELO3C015109.2 Cucumis melo HOM05D006694 ORTHO05D008240 1.6e-07 62.0 76 42.1
CsaV3_1G043500 Cucumis sativus L. HOM05D006694 ORTHO05D008240 1.6e-07 62.0 76 42.1
LjContig00485g0019324 Lotus japonicus HOM05D006694 ORTHO05D008240 4.6e-07 60.5 103 38.8
Hund21974 Selenicereus undatus HOM05D006179 ORTHO05D008240 4.6e-07 60.5 74 45.9
Nitab4.5_0003488g0040 Nicotiana tabacum HOM05D006694 ORTHO05D008240 6.0e-07 60.1 52 57.7
Aa31LG8G12540 Aethionema arabicum HOM05D006694 ORTHO05D008240 7.8e-07 59.7 49 55.1
Aqoxy1G00470 Aquilegia oxysepala HOM05D006694 ORTHO05D008240 7.8e-07 59.7 72 38.9
LjContig00485g0005104 Lotus japonicus HOM05D006694 ORTHO05D008240 7.8e-07 59.7 52 51.9
SalBow5G3658 Salvia bowleyana HOM05D006694 ORTHO05D008240 7.8e-07 59.7 106 33.0
TAR633G1767 Trochodendron aralioides HOM05D006694 ORTHO05D008240 7.8e-07 59.7 75 42.7
Nn7g35871 Nelumbo nucifera HOM05D006694 ORTHO05D008240 1.3e-06 58.9 73 38.4
Nitab4.5_0000718g0300 Nicotiana tabacum HOM05D006694 ORTHO05D008240 1.3e-06 58.9 52 57.7
GSVIVG01037290001 Vitis vinifera HOM05D006694 ORTHO05D008240 1.7e-06 58.5 47 57.4
CAN.G337.135 Capsicum annuum HOM05D006694 ORTHO05D008240 3.0e-06 57.8 52 57.7
MD15G1399900 Malus domestica HOM05D006694 ORTHO05D034883 5.1e-06 57.0 51 49.0
SalBow5G5172 Salvia bowleyana HOM05D006694 ORTHO05D008240 6.6e-06 56.6 106 32.1
Prupe.1G547200 Prunus persica HOM05D006694 ORTHO05D008240 8.6e-06 56.2 49 53.1
SalBow6G6418 Salvia bowleyana HOM05D006694 ORTHO05D008240 8.6e-06 56.2 46 50.0
SalBow6G6606 Salvia bowleyana HOM05D006694 ORTHO05D008240 8.6e-06 56.2 72 38.9


User provided reference genes

Program Settings