Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra09G0051400 Salix brachista HOM05D002956 ORTHO05D009000 9.3e-167 590.1 294 100.0
Potri.009G068300 Populus trichocarpa HOM05D002956 ORTHO05D009000 1.8e-141 506.1 294 87.8
Manes.02G137000 Manihot esculenta HOM05D002956 ORTHO05D009000 2.0e-100 369.8 305 64.6
Cfa009899 Carpinus fangiana HOM05D002956 ORTHO05D009000 5.4e-90 335.1 302 62.3
CSS0047298 Camellia sinensis var. sinensis HOM05D002956 ORTHO05D009000 2.3e-85 319.7 298 59.7
TAR633G2508 Trochodendron aralioides HOM05D002956 ORTHO05D009000 8.3e-83 311.2 303 55.8
Thecc.09G246200 Theobroma cacao HOM05D002956 ORTHO05D009000 7.1e-82 308.1 292 58.6
Haze_23260 Corylus avellana HOM05D002956 ORTHO05D009000 1.6e-81 307.0 371 52.0
Dinv04582 Davidia involucrata HOM05D000102 ORTHO05D000138 2.1e-81 306.6 292 58.9
Atru.chr3.2859 Acer truncatum HOM05D002956 ORTHO05D009000 1.0e-80 304.3 256 62.9
Hma1.2p1_0460F.1_g157580 Hydrangea macrophylla HOM05D002956 ORTHO05D009000 1.7e-80 303.5 301 58.1
Cpa.g.sc34.182 Carica papaya HOM05D002956 ORTHO05D009000 8.6e-80 301.2 279 59.1
Aqoxy2G00440 Aquilegia oxysepala HOM05D002956 ORTHO05D009000 3.3e-79 299.3 290 57.6
Duzib150G0064 Durio zibethinus HOM05D002956 ORTHO05D009000 3.3e-79 299.3 298 56.0
RcHm_v2.0_Chr5g0050271 Rosa chinensis HOM05D002956 ORTHO05D009000 3.3e-79 299.3 256 61.3
Ciclev10016188m.g Citrus clementina HOM05D002956 ORTHO05D009000 5.6e-79 298.5 228 67.1
PGR102G2739 Punica granatum HOM05D002956 ORTHO05D009000 9.5e-79 297.7 221 67.4
Actinidia06979 Actinidia chinensis HOM05D002956 ORTHO05D009000 6.2e-78 295.0 262 59.2
Lj6g0021242 Lotus japonicus HOM05D002956 ORTHO05D009000 1.4e-77 293.9 287 57.1
QL01p016676 Quercus lobata HOM05D002956 ORTHO05D009000 1.8e-77 293.5 314 55.1
CANSAT54G2237 Cannabis sativa HOM05D002956 ORTHO05D009000 3.1e-77 292.7 268 57.1
Gohir.A05G073600 Gossypium hirsutum HOM05D002956 ORTHO05D009000 1.5e-76 290.4 256 58.6
Gohir.D05G076500 Gossypium hirsutum HOM05D002956 ORTHO05D009000 2.2e-75 286.6 281 54.8
Gorai.009G077800 Gossypium raimondii HOM05D002956 ORTHO05D009000 2.2e-75 286.6 281 54.8
MD00G1148000 Malus domestica HOM05D002956 ORTHO05D009000 2.2e-75 286.6 247 60.3
TWI31G1447 Tripterygium wilfordii HOM05D002956 ORTHO05D009000 2.2e-75 286.6 287 54.7
Eucgr.B03751 Eucalyptus grandis HOM05D002956 ORTHO05D009000 4.9e-75 285.4 220 67.7
Aa31LG5G8950 Aethionema arabicum HOM05D002956 ORTHO05D009000 1.1e-74 284.3 276 55.8
Lalb_Chr15g0078501 Lupinus albus HOM05D002956 ORTHO05D009000 1.4e-74 283.9 302 54.3
Migut.N02380 Erythranthe guttata HOM05D002956 ORTHO05D009000 1.9e-74 283.5 215 67.4
Phvul.005G020500 Phaseolus vulgaris HOM05D002956 ORTHO05D009000 1.9e-74 283.5 286 57.3
unitig_8.g3652 Utricularia gibba HOM05D002956 ORTHO05D009000 2.4e-74 283.1 233 60.9
ATR0307G004 Amborella trichopoda HOM05D002956 ORTHO05D009000 4.1e-74 282.3 231 63.2
MBI19_g19212_MAGBIO Magnolia biondii HOM05D002956 ORTHO05D009000 9.2e-74 281.2 258 57.8
MD00G1134800 Malus domestica HOM05D002956 ORTHO05D009000 1.6e-73 280.4 275 56.7
MSTRG.17638 Avicennia marina HOM05D002956 ORTHO05D009000 2.1e-73 280.0 243 60.9
Migut.D00676 Erythranthe guttata HOM05D002956 ORTHO05D009000 2.1e-73 280.0 252 57.9
Glyma.08G154600 Glycine max HOM05D002956 ORTHO05D009000 2.7e-73 279.6 292 54.1
FAN27G0310 Fragaria x ananassa HOM05D002956 ORTHO05D009000 3.5e-73 279.3 264 58.3
PSO384G3893 Papaver somniferum HOM05D002956 ORTHO05D009000 3.5e-73 279.3 284 56.0
GSVIVG01037339001 Vitis vinifera HOM05D002956 ORTHO05D009000 4.6e-73 278.9 193 69.4
VMungo1080G0193 Vigna mungo HOM05D002956 ORTHO05D009000 6.0e-73 278.5 290 54.8
THA.LOC104826457 Tarenaya hassleriana HOM05D002956 ORTHO05D009000 7.8e-73 278.1 284 55.3
FAN22G1360 Fragaria x ananassa HOM05D002956 ORTHO05D009000 1.7e-72 276.9 264 58.3
CDE08G0764 Ceratophyllum demersum HOM05D002956 ORTHO05D009000 3.0e-72 276.2 266 54.9
FvH4_2g35650 Fragaria vesca HOM05D002956 ORTHO05D009000 3.0e-72 276.2 264 58.0
PSO339G4249 Papaver somniferum HOM05D002956 ORTHO05D009000 5.1e-72 275.4 280 54.6
Oeu027216.2 Olea europaea HOM05D002956 ORTHO05D009000 6.6e-72 275.0 324 51.2
Medtr3g437110 Medicago truncatula HOM05D002956 ORTHO05D009000 1.9e-71 273.5 285 54.7
Cc01_g06260 Coffea canephora HOM05D002956 ORTHO05D009000 2.5e-71 273.1 289 53.6
Glyma.15G273500 Glycine max HOM05D002956 ORTHO05D009000 4.3e-71 272.3 270 55.6
Thhalv10002070m.g Eutrema salsugineum HOM05D002956 ORTHO05D009000 5.6e-71 271.9 282 56.7
FAN20G2737 Fragaria x ananassa HOM05D002956 ORTHO05D009000 7.3e-71 271.6 264 57.2
FAN15G3287 Fragaria x ananassa HOM05D002956 ORTHO05D009000 3.6e-70 269.2 264 56.8
arahy.Tifrunner.gnm1.ann1.NKUQ81 Arachis hypogaea HOM05D002956 ORTHO05D009000 1.4e-69 267.3 223 63.2
Ca_26337_v3 Cicer arietinum L. HOM05D002956 ORTHO05D009000 1.8e-69 266.9 263 54.8
Lsat_1_v5_gn_5_63121 Lactuca sativa HOM05D002956 ORTHO05D009000 1.8e-69 266.9 296 52.4
arahy.Tifrunner.gnm1.ann1.UED96S Arachis hypogaea HOM05D002956 ORTHO05D009000 3.1e-69 266.2 219 63.0
SGA_v2.0_scaffold29G12222 Striga asiatica HOM05D002956 ORTHO05D009000 4.0e-69 265.8 237 57.8
AUR62006560 Chenopodium quinoa HOM05D002956 ORTHO05D009000 6.9e-69 265.0 288 52.8
CsaV3_6G038840 Cucumis sativus L. HOM05D002956 ORTHO05D009000 6.9e-69 265.0 282 54.3
Rhsim13G0206200 Rhododendron simsii HOM05D002956 ORTHO05D009000 8.9e-69 264.6 381 43.6
EL10Ac4g10093 Beta vulgaris HOM05D002956 ORTHO05D009000 1.2e-68 264.2 299 52.8
TPR.G11887 Trifolium pratense HOM05D002956 ORTHO05D009000 1.2e-68 264.2 207 64.3
BcaC01g04913 Brassica carinata HOM05D002956 ORTHO05D008031 2.6e-68 263.1 263 55.5
AUR62000215 Chenopodium quinoa HOM05D002956 ORTHO05D009000 3.4e-68 262.7 270 55.2
Peaxi162Scf00032g02025 Petunia axillaris HOM05D002956 ORTHO05D009000 3.4e-68 262.7 287 50.5
Ah.06g194750 Amaranthus hybridus HOM05D002956 ORTHO05D009000 5.8e-68 261.9 298 52.0
A03p26830 Brassica napus HOM05D002956 ORTHO05D008031 7.6e-68 261.5 264 54.2
C03p32170 Brassica napus HOM05D002956 ORTHO05D008031 7.6e-68 261.5 263 55.1
BraA03t11895Z Brassica rapa HOM05D002956 ORTHO05D008031 7.6e-68 261.5 264 54.2
SalBow6G2483 Salvia bowleyana HOM05D002956 ORTHO05D009000 7.6e-68 261.5 239 56.5
Sc16g0010930 Simmondsia chinensis HOM05D002956 ORTHO05D009000 7.6e-68 261.5 270 52.6
Solyc01g008700.4 Solanum lycopersicum HOM05D002956 ORTHO05D009000 1.3e-67 260.8 295 50.8
MELO3C014549.2 Cucumis melo HOM05D002956 ORTHO05D009000 1.7e-67 260.4 306 51.6
BcaB01g03033 Brassica carinata HOM05D002956 ORTHO05D008031 2.2e-67 260.0 267 52.8
BolC3t15559H Brassica oleracea HOM05D002956 ORTHO05D008031 2.9e-67 259.6 264 54.5
DCAR_006895 Daucus carota HOM05D002956 ORTHO05D009000 1.4e-66 257.3 253 55.3
Sopen01g004220 Solanum pennellii HOM05D002956 ORTHO05D009000 5.4e-66 255.4 282 51.8
ECA233G2896 Erigeron canadensis HOM05D000003 ORTHO05D009000 1.2e-65 254.2 195 63.1
Carub.0004s0731 Capsella rubella HOM05D002956 ORTHO05D009000 1.6e-65 253.8 270 53.3
PGSC0003DMG400004431 Solanum tuberosum HOM05D002956 ORTHO05D009000 3.5e-65 252.7 213 60.1
AL4G20050 Arabidopsis lyrata HOM05D002956 ORTHO05D009000 7.8e-65 251.5 274 52.6
Thhalv10002099m.g Eutrema salsugineum HOM05D002956 ORTHO05D009000 2.3e-64 250.0 192 68.2
HPP92_025063 Vanilla planifolia HOM05D002956 ORTHO05D009000 8.7e-64 248.1 270 53.7
HanXRQChr12g0380431 Helianthus annuus HOM05D002956 ORTHO05D009000 1.8e-61 240.4 229 54.1
Nitab4.5_0000390g0150 Nicotiana tabacum HOM05D002956 ORTHO05D009000 1.5e-60 237.3 220 55.9
AT2G26840 Arabidopsis thaliana HOM05D002956 ORTHO05D009000 4.2e-58 229.2 321 44.2
Sp4g08630 Schrenkiella parvula HOM05D002956 ORTHO05D009000 7.9e-57 224.9 231 52.8
ClCG02G022720 Citrullus lanatus HOM05D002956 ORTHO05D009000 1.1e-55 221.1 299 48.5
Duzib168G2273 Durio zibethinus HOM05D002956 ORTHO05D009000 8.4e-51 204.9 167 61.1
Zm00001eb128680 Zea mays HOM05D002956 ORTHO05D009000 1.2e-49 201.1 216 51.4
Nn7g36832 Nelumbo nucifera HOM05D002956 ORTHO05D009000 7.9e-49 198.4 225 50.7
Os01g0268900 Oryza sativa ssp. japonica HOM05D002956 ORTHO05D009000 6.7e-48 195.3 211 50.7
COL.COLO4_07383 Corchorus olitorius HOM05D002956 ORTHO05D009000 1.5e-47 194.1 276 44.9
Pp3c23_20070 Physcomitrium patens HOM05D002956 ORTHO05D009000 1.4e-45 187.6 244 43.4
SMO367G0391 Selaginella moellendorffii HOM05D002956 ORTHO05D009000 2.4e-45 186.8 206 48.1
Mapoly0206s0003 Marchantia polymorpha HOM05D002956 ORTHO05D009000 4.0e-45 186.0 172 52.9
CiPaw.14G111100 Carya illinoinensis HOM05D002956 ORTHO05D009000 4.5e-44 182.6 204 55.4
CBR_g32285 Chara braunii HOM05D002956 ORTHO05D009000 4.6e-41 172.6 171 48.5
Nitab4.5_0006687g0020 Nicotiana tabacum HOM05D002956 ORTHO05D009000 2.3e-32 143.7 94 70.2
AL5G21910 Arabidopsis lyrata HOM05D002956 ORTHO05D009000 6.7e-32 142.1 205 39.5
CiPaw.13G148600 Carya illinoinensis HOM05D002956 ORTHO05D009000 6.7e-32 142.1 309 38.2
Prupe.4G260500 Prunus persica HOM05D002956 ORTHO05D009000 7.4e-31 138.7 141 56.7
AagrBONN_evm.TU.Sc2ySwM_228.3484 Anthoceros agrestis HOM05D002956 ORTHO05D009000 4.1e-29 132.9 132 53.8
Nitab4.5_0006687g0010 Nicotiana tabacum HOM05D002956 ORTHO05D000001 4.5e-28 129.4 167 47.9
MCO16G644 Micromonas commoda HOM05D002956 ORTHO05D009000 1.0e-24 118.2 170 41.8
Psat5g240480 Pisum sativum HOM05D002956 ORTHO05D009000 2.0e-23 114.0 169 42.6
AT3G43910 Arabidopsis thaliana HOM05D002956 ORTHO05D009000 9.7e-23 111.7 181 39.8
CARHR119020 Cardamine hirsuta HOM05D002956 ORTHO05D009000 1.1e-21 108.2 150 43.3
Sed0027603 Sechium edule HOM05D002956 ORTHO05D009000 1.4e-21 107.8 175 44.0
CARHR035860 Cardamine hirsuta HOM05D002956 ORTHO05D009000 6.7e-16 89.0 98 49.0
Cre04.g218000 Chlamydomonas reinhardtii HOM05D002956 ORTHO05D009000 4.1e-13 79.7 112 43.8
vmacro04046 Vaccinium macrocarpon HOM05D002956 ORTHO05D009000 1.6e-12 77.8 92 43.5
Oeu027210.1 Olea europaea HOM05D002956 ORTHO05D009000 1.3e-11 74.7 86 52.3
PRCOL_00003518 Prasinoderma coloniale HOM05D002956 ORTHO05D009000 9.4e-10 68.6 70 48.6
Psat5g184640 Pisum sativum HOM05D002956 ORTHO05D009000 1.4e-08 64.7 110 41.8
CARHR035850 Cardamine hirsuta HOM05D002956 ORTHO05D009000 6.7e-08 62.4 89 44.9


User provided reference genes

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