Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra09G0025900 Salix brachista HOM05D008943 ORTHO05D010477 1.6e-73 279.3 137 100.0
Potri.009G036600 Populus trichocarpa HOM05D008943 ORTHO05D010477 5.3e-56 221.1 137 83.9
Potri.001G244200 Populus trichocarpa HOM05D008943 ORTHO05D010477 3.0e-43 178.7 142 70.4
Manes.01G169500 Manihot esculenta HOM05D008943 ORTHO05D010477 3.8e-30 135.2 138 55.8
TWI79G1516 Tripterygium wilfordii HOM05D008943 ORTHO05D010477 2.0e-23 112.8 132 50.8
TWI31G0177 Tripterygium wilfordii HOM05D008943 ORTHO05D010477 7.7e-23 110.9 132 51.5
ClCG02G019900 Citrullus lanatus HOM05D008943 ORTHO05D010477 7.0e-16 87.8 120 42.5
CiPaw.14G065200 Carya illinoinensis HOM05D008943 ORTHO05D010477 1.6e-15 86.7 133 42.1
Ciclev10030147m.g Citrus clementina HOM05D008943 ORTHO05D010477 2.7e-15 85.9 134 47.8
MELO3C025891.2 Cucumis melo HOM05D008943 ORTHO05D010477 1.3e-14 83.6 117 42.7
CsaV3_7G010000 Cucumis sativus L. HOM05D008943 ORTHO05D010477 2.2e-14 82.8 117 43.6
CiPaw.13G089400 Carya illinoinensis HOM05D008943 ORTHO05D010477 2.9e-14 82.4 124 45.2
Duzib168G0546 Durio zibethinus HOM05D014101 ORTHO05D010477 3.8e-14 82.0 139 41.7
Thecc.09G315700 Theobroma cacao HOM05D014101 ORTHO05D010477 3.8e-14 82.0 139 43.2
QL01p029253 Quercus lobata HOM05D008943 ORTHO05D010477 1.5e-13 80.1 126 43.7
Sed0015087 Sechium edule HOM05D008943 ORTHO05D010477 2.7e-12 75.9 113 40.7
COL.COLO4_18576 Corchorus olitorius HOM05D014101 ORTHO05D010477 4.7e-12 75.1 131 38.2
Haze_24168 Corylus avellana HOM05D008943 ORTHO05D010477 2.3e-11 72.8 122 41.8
Haze_24173 Corylus avellana HOM05D008943 ORTHO05D010477 2.3e-11 72.8 122 41.8
Cfa011556 Carpinus fangiana HOM05D008943 ORTHO05D010477 5.2e-11 71.6 139 36.7
Gohir.A07G100350 Gossypium hirsutum HOM05D014101 ORTHO05D010477 5.2e-11 71.6 133 36.8
Lj3g0000367 Lotus japonicus HOM05D008943 ORTHO05D010477 6.8e-11 71.2 119 42.0
Medtr2g097730 Medicago truncatula HOM05D008943 ORTHO05D010477 6.8e-11 71.2 114 38.6
Glyma.15G035400 Glycine max HOM05D008943 ORTHO05D010477 2.6e-10 69.3 119 38.7
FvH4_3g36931 Fragaria vesca HOM05D008943 ORTHO05D010477 4.4e-10 68.6 124 36.3
Sed0005589 Sechium edule HOM05D008943 ORTHO05D010477 5.7e-10 68.2 116 37.9
CANSAT54G0610 Cannabis sativa HOM05D008943 ORTHO05D010477 1.3e-09 67.0 147 37.4
Cc01_g13330 Coffea canephora HOM05D008943 ORTHO05D010477 1.7e-09 66.6 124 40.3
Prupe.6G070600 Prunus persica HOM05D008943 ORTHO05D010477 3.7e-09 65.5 120 41.7
Gohir.D07G104550 Gossypium hirsutum HOM05D014101 ORTHO05D010477 4.8e-09 65.1 133 35.3
TPR.G6894 Trifolium pratense HOM05D008943 ORTHO05D010477 8.3e-09 64.3 114 36.0
Gohir.A08G001300 Gossypium hirsutum HOM05D014101 ORTHO05D010477 1.4e-08 63.5 114 41.2
Gorai.001G112400 Gossypium raimondii HOM05D014101 ORTHO05D010477 1.4e-08 63.5 133 34.6
Gorai.004G006000 Gossypium raimondii HOM05D014101 ORTHO05D010477 2.4e-08 62.8 120 40.0
Lj3g0017475 Lotus japonicus HOM05D008943 ORTHO05D010477 4.1e-08 62.0 122 37.7
Carub.0001s0678 Capsella rubella HOM05D010249 ORTHO05D012412 5.4e-08 61.6 118 37.3
CARHR007230 Cardamine hirsuta HOM05D010249 ORTHO05D012412 9.1e-08 60.8 119 39.5
THA.LOC104826309 Tarenaya hassleriana HOM05D010249 ORTHO05D012412 9.1e-08 60.8 136 38.2
RcHm_v2.0_Chr5g0066341 Rosa chinensis HOM05D008943 ORTHO05D010477 1.2e-07 60.5 116 36.2
HPP92_019235 Vanilla planifolia HOM05D008943 ORTHO05D010477 2.0e-07 59.7 109 38.5
Lsat_1_v5_gn_9_24780 Lactuca sativa HOM05D008943 ORTHO05D010477 3.5e-07 58.9 126 36.5
Lalb_Chr14g0372021 Lupinus albus HOM05D008943 ORTHO05D010477 4.5e-07 58.5 116 37.1
VMungo1080G1120 Vigna mungo HOM05D008943 ORTHO05D010477 4.5e-07 58.5 117 38.5
BcaB02g06739 Brassica carinata HOM05D010249 ORTHO05D012412 1.3e-06 57.0 122 36.1
Nn2g11207 Nelumbo nucifera HOM05D008943 ORTHO05D010477 3.8e-06 55.5 115 35.7
Gorai.009G096600 Gossypium raimondii HOM05D014101 ORTHO05D010477 5.0e-06 55.1 124 33.9
A10p06000 Brassica napus HOM05D010249 ORTHO05D012412 6.6e-06 54.7 120 35.0
Gohir.A05G093200 Gossypium hirsutum HOM05D014101 ORTHO05D010477 6.6e-06 54.7 125 32.8
Glyma.13G338900 Glycine max HOM05D008943 ORTHO05D010477 8.6e-06 54.3 128 35.2


User provided reference genes

Program Settings