Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra09G0017800 Salix brachista HOM05D006681 ORTHO05D008338 5.6e-172 607.4 294 100.0
Potri.009G026700 Populus trichocarpa HOM05D006681 ORTHO05D008338 1.3e-163 579.7 294 94.6
Atru.chr3.3798 Acer truncatum HOM05D006681 ORTHO05D008338 4.8e-131 471.5 292 75.3
CSS0007914 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 1.1e-130 470.3 287 77.4
QL01p034239 Quercus lobata HOM05D006681 ORTHO05D008338 2.6e-129 465.7 287 76.7
CSS0025304 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 7.7e-129 464.2 287 76.3
Thecc.09G329700 Theobroma cacao HOM05D006681 ORTHO05D008338 3.8e-128 461.8 289 77.2
Ciclev10028948m.g Citrus clementina HOM05D006681 ORTHO05D008338 9.4e-127 457.2 291 75.3
FAN11G3596 Fragaria x ananassa HOM05D006681 ORTHO05D008338 4.0e-125 451.8 288 76.0
FvH4_3g34680 Fragaria vesca HOM05D006681 ORTHO05D008338 5.2e-125 451.4 288 76.0
Duzib170G0311 Durio zibethinus HOM05D006681 ORTHO05D008338 6.7e-125 451.1 289 74.4
CiPaw.13G101600 Carya illinoinensis HOM05D006681 ORTHO05D008338 1.1e-124 450.3 285 75.8
ECA236G1321 Erigeron canadensis HOM05D006681 ORTHO05D008338 4.4e-124 448.4 290 73.8
TWI31G0387 Tripterygium wilfordii HOM05D006681 ORTHO05D008338 5.7e-124 448.0 289 74.4
Gorai.009G102400 Gossypium raimondii HOM05D006681 ORTHO05D008338 7.5e-124 447.6 286 74.8
CANSAT54G2145 Cannabis sativa HOM05D006681 ORTHO05D008338 9.7e-124 447.2 289 72.0
Cfa011429 Carpinus fangiana HOM05D006681 ORTHO05D008338 1.3e-123 446.8 286 75.9
TAR633G1649 Trochodendron aralioides HOM05D006681 ORTHO05D008338 1.3e-123 446.8 289 71.6
COL.COLO4_18427 Corchorus olitorius HOM05D006681 ORTHO05D008338 1.7e-123 446.4 288 74.3
FAN16G0358 Fragaria x ananassa HOM05D006681 ORTHO05D008338 2.8e-123 445.7 288 74.3
Gohir.D05G098750 Gossypium hirsutum HOM05D006681 ORTHO05D008338 2.8e-123 445.7 286 74.5
Gohir.A05G098700 Gossypium hirsutum HOM05D006681 ORTHO05D008338 6.3e-123 444.5 286 74.5
RcHm_v2.0_Chr5g0062361 Rosa chinensis HOM05D006681 ORTHO05D008338 9.1e-122 440.7 288 74.3
GSVIVG01025054001 Vitis vinifera HOM05D006681 ORTHO05D008338 9.1e-122 440.7 290 72.1
MD11G1116600 Malus domestica HOM05D006681 ORTHO05D008338 1.2e-121 440.3 289 72.7
Nn2g10531 Nelumbo nucifera HOM05D006681 ORTHO05D008338 1.2e-121 440.3 287 71.8
Oeu040277.1 Olea europaea HOM05D006681 ORTHO05D008338 4.5e-121 438.3 284 74.6
Cc01_g12140 Coffea canephora HOM05D006681 ORTHO05D008338 2.2e-120 436.0 292 71.6
Prupe.6G086900 Prunus persica HOM05D006681 ORTHO05D008338 2.2e-120 436.0 289 72.7
FAN21G0481 Fragaria x ananassa HOM05D006681 ORTHO05D008338 3.8e-120 435.3 315 68.3
HanXRQChr05g0134071 Helianthus annuus HOM05D006681 ORTHO05D008338 1.1e-119 433.7 285 73.7
arahy.Tifrunner.gnm1.ann1.SK7GFS Arachis hypogaea HOM05D006681 ORTHO05D008338 2.5e-119 432.6 289 69.6
Lsat_1_v5_gn_8_78740 Lactuca sativa HOM05D006681 ORTHO05D008338 4.2e-119 431.8 291 71.5
Ca_19209_v3 Cicer arietinum L. HOM05D006681 ORTHO05D008338 5.5e-119 431.4 290 70.7
Lalb_Chr03g0026931 Lupinus albus HOM05D006681 ORTHO05D008338 7.2e-119 431.0 292 69.2
arahy.Tifrunner.gnm1.ann1.FZI6FG Arachis hypogaea HOM05D006681 ORTHO05D008338 9.4e-119 430.6 289 69.2
CAN.G1647.1 Capsicum annuum HOM05D006681 ORTHO05D008338 2.7e-118 429.1 283 70.7
Sed0010670 Sechium edule HOM05D006681 ORTHO05D008338 3.6e-118 428.7 288 72.2
Eucgr.J02098 Eucalyptus grandis HOM05D006681 ORTHO05D008338 4.7e-118 428.3 291 70.4
PGSC0003DMG400015551 Solanum tuberosum HOM05D006681 ORTHO05D008338 1.0e-117 427.2 283 70.3
Migut.D02146 Erythranthe guttata HOM05D006681 ORTHO05D008338 5.2e-117 424.9 286 71.0
Lj3g0002575 Lotus japonicus HOM05D006681 ORTHO05D008338 6.8e-117 424.5 288 70.5
EL10Ac7g15941 Beta vulgaris HOM05D006681 ORTHO05D008338 1.5e-116 423.3 290 70.0
Peaxi162Scf00411g00068 Petunia axillaris HOM05D006681 ORTHO05D008338 1.5e-116 423.3 283 70.3
Rhsim13G0088300 Rhododendron simsii HOM05D006681 ORTHO05D008338 1.5e-116 423.3 288 71.9
Sopen11g030630 Solanum pennellii HOM05D006681 ORTHO05D008338 2.0e-116 422.9 283 69.6
TPR.G3006 Trifolium pratense HOM05D006681 ORTHO05D008338 2.6e-116 422.5 290 70.0
Psat7g220640 Pisum sativum HOM05D006681 ORTHO05D008338 3.4e-116 422.2 290 69.7
Medtr4g062130 Medicago truncatula HOM05D006681 ORTHO05D008338 5.7e-116 421.4 290 70.3
Solyc11g072970.2 Solanum lycopersicum HOM05D006681 ORTHO05D008338 9.8e-116 420.6 283 69.6
PGR119G1802 Punica granatum HOM05D006681 ORTHO05D008338 1.3e-115 420.2 306 68.6
MBI14_g35939_MAGBIO Magnolia biondii HOM05D006681 ORTHO05D008338 2.8e-115 419.1 289 67.8
THA.LOC104814870 Tarenaya hassleriana HOM05D006681 ORTHO05D008338 9.1e-114 414.1 283 68.9
CsaV3_6G022080 Cucumis sativus L. HOM05D006681 ORTHO05D008338 1.6e-113 413.3 290 66.6
Phvul.011G069100 Phaseolus vulgaris HOM05D006681 ORTHO05D008338 2.0e-113 412.9 291 67.4
Manes.11G136100 Manihot esculenta HOM05D006681 ORTHO05D008338 4.5e-113 411.8 292 71.6
MSTRG.18607 Avicennia marina HOM05D006681 ORTHO05D008338 5.9e-113 411.4 287 70.7
DCAR_006014 Daucus carota HOM05D006681 ORTHO05D008338 2.2e-112 409.5 290 67.9
Aqoxy4G03072 Aquilegia oxysepala HOM05D006681 ORTHO05D008338 3.8e-112 408.7 284 67.3
SalBow3G4078 Salvia bowleyana HOM05D006681 ORTHO05D008338 5.0e-112 408.3 286 68.2
VMungo1127G1059 Vigna mungo HOM05D006681 ORTHO05D008338 1.1e-111 407.1 312 63.8
AT3G46200 Arabidopsis thaliana HOM05D006681 ORTHO05D008338 4.2e-111 405.2 292 66.4
PSO339G5789 Papaver somniferum HOM05D006681 ORTHO05D008338 7.2e-111 404.4 289 67.8
AL5G24960 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 3.6e-110 402.1 288 66.3
ClCG02G020630 Citrullus lanatus HOM05D006681 ORTHO05D008338 4.0e-109 398.7 337 60.5
PSO384G0101 Papaver somniferum HOM05D006681 ORTHO05D008338 6.8e-109 397.9 289 67.1
Glyma.12G075000 Glycine max HOM05D006681 ORTHO05D008338 1.2e-108 397.1 292 65.4
Thhalv10002615m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 4.4e-108 395.2 292 64.7
Carub.0005s1203 Capsella rubella HOM05D006681 ORTHO05D008338 5.7e-108 394.8 287 65.5
FAN25G3219 Fragaria x ananassa HOM05D006681 ORTHO05D008338 6.3e-107 391.3 288 68.4
AUR62001852 Chenopodium quinoa HOM05D006681 ORTHO05D008338 1.4e-106 390.2 289 65.4
SGA_v2.0_scaffold134G34764 Striga asiatica HOM05D006681 ORTHO05D008338 3.1e-106 389.0 256 73.4
Nitab4.5_0002684g0160 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.2e-105 387.1 293 63.8
C03p70520 Brassica napus HOM05D006681 ORTHO05D008338 2.3e-104 382.9 291 63.2
BolC3t19336H Brassica oleracea HOM05D006681 ORTHO05D008338 2.3e-104 382.9 291 63.2
BcaC01g01926 Brassica carinata HOM05D006681 ORTHO05D008338 3.8e-104 382.1 291 62.9
Os05g0117500 Oryza sativa ssp. japonica HOM05D006681 ORTHO05D008338 3.8e-104 382.1 286 63.6
HPP92_006593 Vanilla planifolia HOM05D006681 ORTHO05D008338 8.6e-104 380.9 286 61.2
Zm00001eb266060 Zea mays HOM05D006681 ORTHO05D008338 1.5e-103 380.2 290 62.8
BraA06t25188Z Brassica rapa HOM05D006681 ORTHO05D008338 1.9e-103 379.8 291 62.9
Sp5g15430 Schrenkiella parvula HOM05D006681 ORTHO05D008338 2.5e-103 379.4 291 63.6
A06p21000 Brassica napus HOM05D006681 ORTHO05D008338 5.6e-103 378.3 291 62.9
Lj1A175T11 Lonicera japonica HOM05D006681 ORTHO05D008338 1.2e-102 377.1 286 67.1
Carub.0003s2829 Capsella rubella HOM05D006681 ORTHO05D008338 8.0e-102 374.4 287 61.7
vmacro03125 Vaccinium macrocarpon HOM05D006681 ORTHO05D008338 1.0e-101 374.0 287 65.9
Aa31LG4G15300 Aethionema arabicum HOM05D006681 ORTHO05D008338 3.7e-99 365.5 367 51.5
Dinv32860 Davidia involucrata HOM05D006681 ORTHO05D008338 1.6e-94 350.1 222 76.1
Thhalv10002633m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 2.3e-93 346.3 292 58.9
Duzib168G1095 Durio zibethinus HOM05D006681 ORTHO05D008338 4.0e-93 345.5 289 60.9
AUR62009646 Chenopodium quinoa HOM05D006681 ORTHO05D008338 8.3e-91 337.8 286 57.7
Ah.08g214980 Amaranthus hybridus HOM05D006681 ORTHO05D008338 1.1e-90 337.4 291 59.1
Lj3g0011020 Lotus japonicus HOM05D006681 ORTHO05D008338 1.4e-90 337.0 228 71.1
Nitab4.5_0002684g0190 Nicotiana tabacum HOM05D006681 ORTHO05D008338 2.5e-87 326.2 283 58.3
Cpa.g.sc2126.1 Carica papaya HOM05D006681 ORTHO05D008338 7.3e-87 324.7 208 75.0
Nitab4.5_0001953g0020 Nicotiana tabacum HOM05D006681 ORTHO05D008338 4.7e-86 322.0 285 56.5
Haze_24007 Corylus avellana HOM05D006681 ORTHO05D008338 1.2e-84 317.4 441 45.4
Pp3c11_23040 Physcomitrium patens HOM05D006681 ORTHO05D008338 5.8e-84 315.1 283 54.4
SMO367G0798 Selaginella moellendorffii HOM05D006681 ORTHO05D008338 2.2e-83 313.2 278 54.0
Mapoly0128s0008 Marchantia polymorpha HOM05D006681 ORTHO05D008338 3.2e-82 309.3 286 52.8
AagrBONN_evm.TU.Sc2ySwM_228.1772 Anthoceros agrestis HOM05D006681 ORTHO05D008338 8.6e-80 301.2 286 52.8
MELO3C013668.2 Cucumis melo HOM05D006681 ORTHO05D008338 2.0e-76 290.0 257 57.6
Nitab4.5_0001953g0050 Nicotiana tabacum HOM05D006681 ORTHO05D008338 4.0e-69 265.8 287 48.8
Hund05017 Selenicereus undatus HOM05D006681 ORTHO05D008338 3.4e-68 262.7 289 49.1
Sc06g0008190 Simmondsia chinensis HOM05D006681 ORTHO05D008338 1.9e-66 256.9 181 68.5
CBR_g415 Chara braunii HOM05D006681 ORTHO05D008338 4.2e-66 255.8 344 39.2
AL1G56400 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 1.7e-59 233.8 191 59.7
SEGI_27570 Sequoiadendron giganteum HOM05D006681 ORTHO05D008338 1.1e-55 221.1 199 56.8
ATR0759G055 Amborella trichopoda HOM05D006681 ORTHO05D008338 7.4e-55 218.4 157 63.7
Pp3c11_23047 Physcomitrium patens HOM05D006681 ORTHO05D008338 1.4e-50 204.1 173 57.2
Sc06g0008200 Simmondsia chinensis HOM05D006681 ORTHO05D008338 2.5e-39 166.8 108 69.4
Glyma.11G145018 Glycine max HOM05D006681 ORTHO05D008338 5.9e-36 155.6 110 64.5
Nitab4.5_0000766g0030 Nicotiana tabacum HOM05D006681 ORTHO05D008338 9.3e-34 148.3 143 53.1
CAN.G1289.2 Capsicum annuum HOM05D006681 ORTHO05D008338 4.3e-31 139.4 209 41.6
PRCOL_00001211 Prasinoderma coloniale HOM05D006681 ORTHO05D008338 3.2e-26 123.2 434 23.7
MCO11G760 Micromonas commoda HOM05D006681 ORTHO05D008338 7.9e-25 118.6 265 29.4
MD03G1102800 Malus domestica HOM05D006681 ORTHO05D008338 2.0e-20 104.0 76 65.8
Actinidia20468 Actinidia chinensis HOM05D006681 ORTHO05D008338 2.7e-17 93.6 60 75.0
CDE08G1356 Ceratophyllum demersum HOM05D006681 ORTHO05D008338 7.9e-17 92.0 66 60.6
Nitab4.5_0001068g0110 Nicotiana tabacum HOM05D006681 ORTHO05D008338 2.0e-12 77.4 57 63.2
CARHR154620 Cardamine hirsuta HOM05D006681 ORTHO05D008338 7.5e-07 58.9 45 60.0


User provided reference genes

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