Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra09G0015400 Salix brachista HOM05D006202 ORTHO05D008227 7.0e-270 933.3 461 100.0
Potri.009G024100 Populus trichocarpa HOM05D006202 ORTHO05D008227 1.0e-212 743.4 461 81.1
Manes.10G152100 Manihot esculenta HOM05D006202 ORTHO05D008227 9.1e-185 650.6 461 71.6
QL04p001552 Quercus lobata HOM05D006202 ORTHO05D008227 4.4e-179 631.7 459 70.2
Haze_03268 Corylus avellana HOM05D006202 ORTHO05D008227 4.1e-177 625.2 460 70.0
CSS0029964 Camellia sinensis var. sinensis HOM05D006202 ORTHO05D008227 1.2e-176 623.6 461 69.6
Dinv43939 Davidia involucrata HOM05D006202 ORTHO05D008227 2.0e-176 622.9 460 69.6
Prupe.1G561800 Prunus persica HOM05D006202 ORTHO05D008227 2.0e-176 622.9 461 69.2
TWI73G0821 Tripterygium wilfordii HOM05D006202 ORTHO05D008227 2.7e-176 622.5 461 69.0
Actinidia21584 Actinidia chinensis HOM05D006202 ORTHO05D008227 2.2e-175 619.4 460 68.7
RcHm_v2.0_Chr1g0313251 Rosa chinensis HOM05D006202 ORTHO05D008227 3.2e-174 615.5 461 69.2
Rhsim03G0068600 Rhododendron simsii HOM05D006202 ORTHO05D008227 9.4e-174 614.0 430 72.1
Cfa010710 Carpinus fangiana HOM05D006202 ORTHO05D008227 1.2e-173 613.6 437 70.9
Lj3g0005275 Lotus japonicus HOM05D006202 ORTHO05D008227 6.1e-173 611.3 465 69.0
TAR369G0651 Trochodendron aralioides HOM05D006202 ORTHO05D008227 1.0e-172 610.5 461 68.3
Glyma.08G157800 Glycine max HOM05D006202 ORTHO05D008227 4.0e-172 608.6 461 68.3
GSVIVG01001357001 Vitis vinifera HOM05D006202 ORTHO05D008227 1.2e-171 607.1 483 65.8
THA.LOC104815880 Tarenaya hassleriana HOM05D006202 ORTHO05D008227 2.8e-170 602.4 461 67.7
Glyma.15G268400 Glycine max HOM05D006202 ORTHO05D008227 1.1e-169 600.5 460 68.3
Lalb_Chr01g0015151 Lupinus albus HOM05D006202 ORTHO05D008227 1.4e-169 600.1 460 66.5
Nitab4.5_0000468g0040 Nicotiana tabacum HOM05D006202 ORTHO05D008227 3.1e-169 599.0 460 67.4
CiPaw.02G012300 Carya illinoinensis HOM05D006202 ORTHO05D008227 4.1e-169 598.6 441 68.9
Nn2g15679 Nelumbo nucifera HOM05D006202 ORTHO05D008227 2.0e-168 596.3 460 66.1
Aa31LG5G5070 Aethionema arabicum HOM05D006202 ORTHO05D008227 1.7e-167 593.2 460 67.0
MD02G1319400 Malus domestica HOM05D006202 ORTHO05D008227 5.0e-167 591.7 411 72.0
VMungo1080G0924 Vigna mungo HOM05D006202 ORTHO05D008227 5.0e-167 591.7 461 66.8
Cpa.g.sc189.4 Carica papaya HOM05D006202 ORTHO05D008227 8.5e-167 590.9 434 70.7
vmacro21164 Vaccinium macrocarpon HOM05D006202 ORTHO05D008227 1.1e-166 590.5 401 73.8
Sed0014986 Sechium edule HOM05D006202 ORTHO05D008227 1.9e-166 589.7 432 69.7
Atru.chr11.2704 Acer truncatum HOM05D006202 ORTHO05D008227 3.2e-166 589.0 461 67.5
TPR.G16148 Trifolium pratense HOM05D006202 ORTHO05D008227 3.2e-166 589.0 460 66.7
Cc02_g26930 Coffea canephora HOM05D006202 ORTHO05D008227 7.2e-166 587.8 413 71.7
Oeu060701.1 Olea europaea HOM05D006202 ORTHO05D008227 1.2e-165 587.0 460 65.9
Sopen01g033340 Solanum pennellii HOM05D006202 ORTHO05D008227 1.2e-165 587.0 460 66.1
arahy.Tifrunner.gnm1.ann1.03K86Q Arachis hypogaea HOM05D006202 ORTHO05D008227 2.1e-165 586.3 433 68.6
FAN04G1730 Fragaria x ananassa HOM05D006202 ORTHO05D008227 2.1e-165 586.3 400 74.0
FvH4_5g30330 Fragaria vesca HOM05D006202 ORTHO05D008227 3.6e-165 585.5 400 74.2
arahy.Tifrunner.gnm1.ann1.Y9YBLC Arachis hypogaea HOM05D006202 ORTHO05D008227 6.1e-165 584.7 452 67.5
Phvul.005G042000 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 6.1e-165 584.7 435 69.2
FAN18G2168 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.4e-164 583.6 400 74.0
Medtr2g061710 Medicago truncatula HOM05D006202 ORTHO05D008227 1.8e-164 583.2 462 66.7
Nitab4.5_0010722g0010 Nicotiana tabacum HOM05D006202 ORTHO05D008227 2.3e-164 582.8 412 71.8
FAN08G1924 Fragaria x ananassa HOM05D006202 ORTHO05D008227 3.0e-164 582.4 400 73.8
Aqoxy1G00030 Aquilegia oxysepala HOM05D006202 ORTHO05D008227 8.8e-164 580.9 461 65.1
PSO384G0467 Papaver somniferum HOM05D006202 ORTHO05D008227 8.8e-164 580.9 461 65.3
Solyc01g073730.4 Solanum lycopersicum HOM05D006202 ORTHO05D008227 8.8e-164 580.9 460 65.7
Ciclev10031726m.g Citrus clementina HOM05D006202 ORTHO05D008227 2.0e-163 579.7 470 64.3
FAN13G0191 Fragaria x ananassa HOM05D006202 ORTHO05D008227 2.0e-163 579.7 400 73.8
SalBow5G5675 Salvia bowleyana HOM05D006202 ORTHO05D008227 4.4e-163 578.6 461 65.5
SGA_v2.0_scaffold5G03106 Striga asiatica HOM05D006202 ORTHO05D008227 4.4e-163 578.6 424 68.9
Lj9C620G10 Lonicera japonica HOM05D006202 ORTHO05D008227 7.5e-163 577.8 401 72.3
CAN.G129.48 Capsicum annuum HOM05D006202 ORTHO05D008227 9.8e-163 577.4 416 70.7
arahy.Tifrunner.gnm1.ann1.YK6119 Arachis hypogaea HOM05D006202 ORTHO05D008227 1.3e-162 577.0 433 67.9
ClCG09G003710 Citrullus lanatus HOM05D006202 ORTHO05D008227 1.3e-162 577.0 460 65.9
Migut.I00539 Erythranthe guttata HOM05D006202 ORTHO05D008227 6.3e-162 574.7 455 65.1
Thecc.09G200100 Theobroma cacao HOM05D006202 ORTHO05D008227 6.3e-162 574.7 464 64.7
Carub.0004s1327 Capsella rubella HOM05D006202 ORTHO05D008227 8.3e-162 574.3 460 64.8
Migut.B01400 Erythranthe guttata HOM05D006202 ORTHO05D008227 1.4e-161 573.5 460 65.2
MBI04_g33961_MAGBIO Magnolia biondii HOM05D006202 ORTHO05D008227 1.8e-161 573.2 403 71.2
PGSC0003DMG401028974 Solanum tuberosum HOM05D006202 ORTHO05D008227 1.8e-161 573.2 401 72.1
Lsat_1_v5_gn_4_46560 Lactuca sativa HOM05D006202 ORTHO05D008227 2.4e-161 572.8 460 63.9
Sc10g0005310 Simmondsia chinensis HOM05D006202 ORTHO05D008227 5.4e-161 571.6 415 69.6
Phvul.005G041900 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 7.0e-161 571.2 381 75.6
Ca_03201_v3 Cicer arietinum L. HOM05D006202 ORTHO05D008227 1.2e-160 570.5 428 69.2
ECA234G4350 Erigeron canadensis HOM05D006202 ORTHO05D008227 1.2e-160 570.5 412 69.4
AL4G27290 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 2.0e-160 569.7 460 64.6
Peaxi162Scf00402g00616 Petunia axillaris HOM05D006202 ORTHO05D008227 2.7e-160 569.3 400 71.5
Eucgr.A00275 Eucalyptus grandis HOM05D006202 ORTHO05D008227 3.5e-160 568.9 413 71.2
Eucgr.A00079 Eucalyptus grandis HOM05D006202 ORTHO05D008227 5.9e-160 568.2 421 70.5
AT2G31955 Arabidopsis thaliana HOM05D006202 ORTHO05D008227 1.3e-159 567.0 460 64.3
Duzib168G0949 Durio zibethinus HOM05D006202 ORTHO05D008227 1.3e-159 567.0 423 69.0
HanXRQChr16g0520351 Helianthus annuus HOM05D006202 ORTHO05D008227 1.3e-159 567.0 460 63.9
Sp4g14320 Schrenkiella parvula HOM05D006202 ORTHO05D008227 1.7e-159 566.6 460 63.7
PSO339G0702 Papaver somniferum HOM05D006202 ORTHO05D008227 3.8e-159 565.5 392 72.4
MSTRG.28100 Avicennia marina HOM05D006202 ORTHO05D008227 1.9e-158 563.1 410 69.5
Ah.14g085700 Amaranthus hybridus HOM05D006202 ORTHO05D008227 2.5e-158 562.8 416 67.8
Thhalv10016791m.g Eutrema salsugineum HOM05D006202 ORTHO05D008227 3.3e-158 562.4 460 63.9
COL.COLO4_07529 Corchorus olitorius HOM05D006202 ORTHO05D008227 5.6e-158 561.6 407 70.0
Gorai.004G013400 Gossypium raimondii HOM05D006202 ORTHO05D008227 3.6e-157 558.9 395 70.9
ATR0605G327 Amborella trichopoda HOM05D006202 ORTHO05D008227 6.1e-157 558.1 404 70.5
BcaC01g05926 Brassica carinata HOM05D006202 ORTHO05D008227 1.8e-156 556.6 412 69.2
BolC3t14483H Brassica oleracea HOM05D006202 ORTHO05D008227 1.8e-156 556.6 412 69.2
Gohir.D08G018900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 2.3e-156 556.2 396 70.2
DCAR_001807 Daucus carota HOM05D006202 ORTHO05D008227 4.0e-156 555.4 401 69.8
BraA03t11059Z Brassica rapa HOM05D006202 ORTHO05D008227 5.2e-156 555.1 391 71.6
Gohir.A08G008900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 3.4e-155 552.4 395 69.6
AUR62034625 Chenopodium quinoa HOM05D006202 ORTHO05D008227 9.8e-155 550.8 426 64.8
AUR62036652 Chenopodium quinoa HOM05D006202 ORTHO05D008227 9.8e-155 550.8 426 64.8
Os12g0507000 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 2.9e-154 549.3 408 66.9
CANSAT80G0703 Cannabis sativa HOM05D006202 ORTHO05D008227 4.9e-154 548.5 463 63.5
CsaV3_7G031490 Cucumis sativus L. HOM05D006202 ORTHO05D008227 1.1e-153 547.4 373 72.9
Zm00001eb244230 Zea mays HOM05D006202 ORTHO05D008227 4.1e-153 545.4 400 67.5
Potri.001G230604 Populus trichocarpa HOM05D006202 ORTHO05D008227 1.2e-152 543.9 460 64.6
unitig_749.g13486 Utricularia gibba HOM05D006202 ORTHO05D008227 2.0e-152 543.1 410 66.1
Os02g0258900 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 2.3e-151 539.7 415 65.1
EL10Ac3g06182 Beta vulgaris HOM05D006202 ORTHO05D008227 1.8e-148 530.0 424 63.4
HPP92_023784 Vanilla planifolia HOM05D006202 ORTHO05D008227 3.1e-148 529.3 401 66.6
A03p17940 Brassica napus HOM05D000200 ORTHO05D000262 9.5e-142 507.7 367 69.8
C03p21020 Brassica napus HOM05D000200 ORTHO05D000262 9.5e-142 507.7 388 67.3
Actinidia15848 Actinidia chinensis HOM05D006202 ORTHO05D008227 5.2e-140 501.9 455 60.0
CDE06G1615 Ceratophyllum demersum HOM05D006202 ORTHO05D008227 3.9e-135 485.7 447 60.0
SEGI_40145 Sequoiadendron giganteum HOM05D006202 ORTHO05D008227 6.2e-133 478.4 416 60.3
SMO361G0213 Selaginella moellendorffii HOM05D006202 ORTHO05D008227 1.8e-132 476.9 383 62.1
Mapoly0045s0149 Marchantia polymorpha HOM05D006202 ORTHO05D008227 2.0e-131 473.4 394 60.4
Pp3c5_22480 Physcomitrium patens HOM05D006202 ORTHO05D008227 9.9e-131 471.1 383 61.1
arahy.Tifrunner.gnm1.ann1.JS3HL2 Arachis hypogaea HOM05D006202 ORTHO05D008227 1.6e-125 453.8 433 57.3
CBR_g36677 Chara braunii HOM05D006202 ORTHO05D008227 4.7e-125 452.2 383 59.3
AL80U10060 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 4.8e-117 425.6 460 52.8
TAR369G1105 Trochodendron aralioides HOM05D006202 ORTHO05D008227 1.5e-115 420.6 322 67.4
MCO15G349 Micromonas commoda HOM05D006202 ORTHO05D008227 5.1e-111 405.6 383 53.8
Hund12940 Selenicereus undatus HOM05D006202 ORTHO05D008227 2.4e-108 396.7 302 64.9
MELO3C023505.2 Cucumis melo HOM05D006202 ORTHO05D008227 6.9e-108 395.2 321 63.9
Cre13.g602901 Chlamydomonas reinhardtii HOM05D006202 ORTHO05D008227 1.7e-106 390.6 441 49.2
CARHR125690 Cardamine hirsuta HOM05D006202 ORTHO05D008227 3.5e-104 382.9 321 63.6
Psat1g128920 Pisum sativum HOM05D006202 ORTHO05D008227 6.7e-103 378.6 326 61.7
PRCOL_00002201 Prasinoderma coloniale HOM05D006202 ORTHO05D008227 3.8e-98 362.8 387 48.3
Pp3c6_6420 Physcomitrium patens HOM05D006202 ORTHO05D008227 6.0e-96 355.5 381 50.1
Cfa022704 Carpinus fangiana HOM05D006202 ORTHO05D008227 5.5e-89 332.4 397 46.3
SHI12251 Sapria himalayana HOM05D006202 ORTHO05D008227 9.4e-73 278.5 210 68.6
SHI12244 Sapria himalayana HOM05D006202 ORTHO05D008227 2.3e-63 247.3 189 67.2
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 1.6e-59 234.6 341 38.4
AagrBONN_evm.TU.Sc2ySwM_344.4902 Anthoceros agrestis HOM05D006202 ORTHO05D008227 1.0e-58 231.9 159 70.4
SHI12245 Sapria himalayana HOM05D006202 ORTHO05D008227 6.3e-53 212.6 179 62.6
ATR0605G108 Amborella trichopoda HOM05D006202 ORTHO05D008227 4.1e-44 183.3 161 62.1
SHI34064 Sapria himalayana HOM05D006202 ORTHO05D367267 1.4e-15 88.6 59 78.0
A05p13580 Brassica napus HOM05D006202 ORTHO05D033532 2.7e-11 74.3 120 41.7
BraA05t20295Z Brassica rapa HOM05D006202 ORTHO05D033532 2.7e-11 74.3 120 41.7
TAR623G0116 Trochodendron aralioides HOM05D006202 ORTHO05D414173 1.6e-08 65.1 35 80.0


User provided reference genes

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