Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra09G0013900 Salix brachista HOM05D002489 ORTHO05D002653 1.6e-64 249.2 123 100.0
Potri.009G022050 Populus trichocarpa HOM05D002489 ORTHO05D002653 1.3e-42 176.4 134 68.7
Potri.001G225400 Populus trichocarpa HOM05D002489 ORTHO05D002653 8.2e-32 140.6 146 55.5
Dinv15412 Davidia involucrata HOM05D002489 ORTHO05D002653 6.5e-21 104.4 123 44.7
COL.COLO4_33264 Corchorus olitorius HOM05D002489 ORTHO05D002653 3.0e-18 95.5 113 46.0
QL01p015995 Quercus lobata HOM05D002489 ORTHO05D002653 6.7e-18 94.4 123 43.1
Rhsim13G0202300 Rhododendron simsii HOM05D002489 ORTHO05D002653 1.3e-16 90.1 112 42.9
Nn2g14603 Nelumbo nucifera HOM05D002489 ORTHO05D002653 3.7e-16 88.6 119 43.7
Actinidia07005 Actinidia chinensis HOM05D002489 ORTHO05D002653 4.8e-16 88.2 122 38.5
CiPaw.14G108000 Carya illinoinensis HOM05D002489 ORTHO05D002653 8.2e-16 87.4 121 41.3
Duzib168G0048 Durio zibethinus HOM05D002489 ORTHO05D002653 1.8e-15 86.3 119 40.3
Thecc.09G251300 Theobroma cacao HOM05D002489 ORTHO05D002653 3.1e-15 85.5 121 41.3
Hma1.2p1_2592F.1_g325030 Hydrangea macrophylla HOM05D002489 ORTHO05D002653 4.1e-15 85.1 122 41.0
vmacro04096 Vaccinium macrocarpon HOM05D002489 ORTHO05D002653 4.1e-15 85.1 122 39.3
Manes.01G176600 Manihot esculenta HOM05D002489 ORTHO05D002653 9.1e-15 84.0 112 47.3
Nn7g36989 Nelumbo nucifera HOM05D002489 ORTHO05D002653 1.2e-14 83.6 123 43.9
Eucgr.J00664 Eucalyptus grandis HOM05D002489 ORTHO05D002653 2.6e-14 82.4 121 42.1
MBI19_g39605_MAGBIO Magnolia biondii HOM05D002489 ORTHO05D002653 1.7e-13 79.7 119 39.5
Gohir.A05G072900 Gossypium hirsutum HOM05D002489 ORTHO05D002653 2.2e-13 79.3 121 43.0
MBI13_g00894_MAGBIO Magnolia biondii HOM05D002489 ORTHO05D002653 2.2e-13 79.3 117 41.9
Gohir.D05G075800 Gossypium hirsutum HOM05D002489 ORTHO05D002653 3.8e-13 78.6 121 41.3
Gorai.009G077100 Gossypium raimondii HOM05D002489 ORTHO05D002653 3.8e-13 78.6 121 41.3
Glyma.02G277000 Glycine max HOM05D002489 ORTHO05D002653 5.0e-13 78.2 119 36.1
Lalb_Chr10g0106061 Lupinus albus HOM05D002489 ORTHO05D002653 1.1e-12 77.0 112 37.5
Peaxi162Scf00978g00427 Petunia axillaris HOM05D002489 ORTHO05D002653 1.1e-12 77.0 121 39.7
Peaxi162Scf47032g00004 Petunia axillaris HOM05D002489 ORTHO05D002653 1.1e-12 77.0 121 39.7
Glyma.14G038800 Glycine max HOM05D002489 ORTHO05D002653 4.2e-12 75.1 119 36.1
Actinidia24486 Actinidia chinensis HOM05D002489 ORTHO05D002653 5.5e-12 74.7 116 37.1
CSS0027937 Camellia sinensis var. sinensis HOM05D002489 ORTHO05D002653 5.5e-12 74.7 122 36.1
Aqoxy2G00026_Aqoxy2G00027 Aquilegia oxysepala HOM05D002489 ORTHO05D002653 7.2e-12 74.3 117 39.3
Cc01_g07160 Coffea canephora HOM05D002489 ORTHO05D002653 9.4e-12 73.9 123 37.4
Nitab4.5_0002567g0120 Nicotiana tabacum HOM05D002489 ORTHO05D002653 1.2e-11 73.6 121 37.2
Lalb_Chr17g0347751 Lupinus albus HOM05D002489 ORTHO05D002653 1.6e-11 73.2 119 34.5
GSVIVG01037394001 Vitis vinifera HOM05D002489 ORTHO05D002653 1.6e-11 73.2 133 36.1
Phvul.008G204500 Phaseolus vulgaris HOM05D002489 ORTHO05D002653 2.1e-11 72.8 119 34.5
FAN06G2510 Fragaria x ananassa HOM05D002489 ORTHO05D002653 2.7e-11 72.4 123 35.8
VMungo0647G2089 Vigna mungo HOM05D002489 ORTHO05D002653 1.8e-10 69.7 112 34.8
FvH4_7g06930 Fragaria vesca HOM05D002489 ORTHO05D002653 3.0e-10 68.9 131 33.6
TAR636G2122 Trochodendron aralioides HOM05D002489 ORTHO05D002653 5.1e-10 68.2 122 35.2
Aqoxy1G00059 Aquilegia oxysepala HOM05D002489 ORTHO05D002653 8.8e-10 67.4 118 34.7
CANSAT54G0417 Cannabis sativa HOM05D002489 ORTHO05D002653 1.5e-09 66.6 120 34.2
Hma1.2p1_1468F.1_g285540 Hydrangea macrophylla HOM05D002489 ORTHO05D002653 1.5e-09 66.6 96 40.6
Oeu013452.1 Olea europaea HOM05D002489 ORTHO05D002653 1.5e-09 66.6 121 38.8
Lj5g0011508 Lotus japonicus HOM05D002489 ORTHO05D002653 2.0e-09 66.2 112 37.5
TWI31G1036 Tripterygium wilfordii HOM05D002489 ORTHO05D002653 3.3e-09 65.5 120 36.7
Migut.D00705 Erythranthe guttata HOM05D002489 ORTHO05D002653 4.4e-09 65.1 121 31.4
LjContig00564g0014208 Lotus japonicus HOM05D002489 ORTHO05D002653 4.4e-09 65.1 119 32.8
CAN.G280.1 Capsicum annuum HOM05D002489 ORTHO05D002653 5.7e-09 64.7 125 34.4
MELO3C014530.2 Cucumis melo HOM05D002489 ORTHO05D002653 5.7e-09 64.7 126 34.9
CsaV3_6G038670 Cucumis sativus L. HOM05D002489 ORTHO05D002653 5.7e-09 64.7 126 35.7
TAR623G0883 Trochodendron aralioides HOM05D002489 ORTHO05D002653 1.3e-08 63.5 120 37.5
FAN03G1474 Fragaria x ananassa HOM05D002489 ORTHO05D002653 1.7e-08 63.2 125 34.4
ClCG02G022540 Citrullus lanatus HOM05D002489 ORTHO05D002653 2.2e-08 62.8 125 34.4
RcHm_v2.0_Chr1g0336861 Rosa chinensis HOM05D002489 ORTHO05D002653 2.8e-08 62.4 129 33.3
PSO675G1019 Papaver somniferum HOM05D002489 ORTHO05D002653 3.7e-08 62.0 116 33.6
TAR633G1712 Trochodendron aralioides HOM05D002489 ORTHO05D002653 3.7e-08 62.0 150 30.7
Gohir.D04G018800 Gossypium hirsutum HOM05D002489 ORTHO05D002653 4.8e-08 61.6 127 33.9
Haze_23547 Corylus avellana HOM05D002489 ORTHO05D002653 6.3e-08 61.2 138 34.1
Lj2C825G1 Lonicera japonica HOM05D002489 ORTHO05D002653 6.3e-08 61.2 119 38.7
MSTRG.12423 Avicennia marina HOM05D002489 ORTHO05D002653 1.1e-07 60.5 121 33.9
FAN03G2991 Fragaria x ananassa HOM05D002489 ORTHO05D002653 1.1e-07 60.5 106 34.9
FAN10G0477 Fragaria x ananassa HOM05D002489 ORTHO05D002653 2.4e-07 59.3 103 35.0
Gorai.012G022300 Gossypium raimondii HOM05D002489 ORTHO05D002653 2.4e-07 59.3 127 33.9
Atru.chr4.883 Acer truncatum HOM05D002489 ORTHO05D002653 3.1e-07 58.9 122 32.8
FAN01G0190 Fragaria x ananassa HOM05D002489 ORTHO05D002653 4.1e-07 58.5 106 34.0
Ciclev10002081m.g Citrus clementina HOM05D002489 ORTHO05D002653 5.3e-07 58.2 122 32.0
FvH4_7g04210 Fragaria vesca HOM05D002489 ORTHO05D002653 5.3e-07 58.2 106 34.0
RcHm_v2.0_Chr1g0328761 Rosa chinensis HOM05D002489 ORTHO05D002653 5.3e-07 58.2 109 34.9
PGR119G0475 Punica granatum HOM05D002489 ORTHO05D002653 7.0e-07 57.8 112 37.5
Gohir.A05G396200 Gossypium hirsutum HOM05D002489 ORTHO05D002653 9.1e-07 57.4 128 32.8
FAN06G4066 Fragaria x ananassa HOM05D002489 ORTHO05D002653 1.2e-06 57.0 106 33.0
Duzib114G0058 Durio zibethinus HOM05D002489 ORTHO05D002653 1.5e-06 56.6 109 34.9
Duzib128G0493 Durio zibethinus HOM05D002489 ORTHO05D002653 2.6e-06 55.8 123 32.5
ECA238G0759 Erigeron canadensis HOM05D002489 ORTHO05D002653 2.6e-06 55.8 114 41.2
Peaxi162Scf00050g02112 Petunia axillaris HOM05D002489 ORTHO05D002653 4.5e-06 55.1 121 33.9
Prupe.2G047600 Prunus persica HOM05D002489 ORTHO05D002653 5.9e-06 54.7 127 29.9
PGSC0003DMG400027390 Solanum tuberosum HOM05D002489 ORTHO05D002653 5.9e-06 54.7 128 31.2


User provided reference genes

Program Settings