Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra09G0010900 Salix brachista HOM05D000978 ORTHO05D349116 4.3e-181 637.9 322 100.0
Potri.009G017700 Populus trichocarpa HOM05D000978 ORTHO05D000813 1.1e-75 287.7 593 39.0
Potri.001G216900 Populus trichocarpa HOM05D000978 ORTHO05D000813 3.2e-59 233.0 600 33.5
Sabra16G0126900 Salix brachista HOM05D000978 ORTHO05D000813 6.2e-55 218.8 592 32.6
Manes.04G060100 Manihot esculenta HOM05D000978 ORTHO05D000813 9.6e-16 88.6 593 25.1
CiPaw.14G094300 Carya illinoinensis HOM05D000978 ORTHO05D000813 1.1e-14 85.1 290 31.0
Thecc.09G272600 Theobroma cacao HOM05D000978 ORTHO05D000813 1.8e-14 84.3 558 24.0
COL.COLO4_37849 Corchorus olitorius HOM05D000978 ORTHO05D000813 3.2e-11 73.6 548 25.5
GSVIVG01037572001 Vitis vinifera HOM05D000978 ORTHO05D000813 3.2e-11 73.6 297 28.3
Atru.chr3.3115 Acer truncatum HOM05D000978 ORTHO05D000813 7.1e-11 72.4 275 28.4
Duzib170G0301 Durio zibethinus HOM05D000978 ORTHO05D000813 7.1e-11 72.4 128 36.7
BcaB02g10078 Brassica carinata HOM05D000978 ORTHO05D000813 2.7e-10 70.5 308 26.0
Duzib150G0471 Durio zibethinus HOM05D000978 ORTHO05D000813 1.0e-09 68.6 118 36.4
MD11G1173100 Malus domestica HOM05D000978 ORTHO05D000813 3.9e-09 66.6 124 37.9
Prupe.6G144300 Prunus persica HOM05D000978 ORTHO05D000813 6.7e-09 65.9 123 39.0
Thhalv10001928m.g Eutrema salsugineum HOM05D000978 ORTHO05D000813 1.1e-08 65.1 331 24.8
AL4G21140 Arabidopsis lyrata HOM05D000978 ORTHO05D000813 4.3e-08 63.2 338 25.4
AT2G27230 Arabidopsis thaliana HOM05D000978 ORTHO05D000813 7.4e-08 62.4 344 24.4
Duzib168G0251 Durio zibethinus HOM05D000978 ORTHO05D000813 1.3e-07 61.6 158 31.6
Ciclev10029797m.g Citrus clementina HOM05D000978 ORTHO05D000813 2.8e-07 60.5 319 25.7
FAN25G0139 Fragaria x ananassa HOM05D000978 ORTHO05D000813 2.8e-07 60.5 112 37.5
SGA_v2.0_scaffold22G09802 Striga asiatica HOM05D000978 ORTHO05D000813 2.8e-07 60.5 354 24.3
Dinv18835 Davidia involucrata HOM05D000978 ORTHO05D000813 3.7e-07 60.1 138 32.6
FAN21G1547 Fragaria x ananassa HOM05D000978 ORTHO05D000813 3.7e-07 60.1 112 37.5
Haze_23556 Corylus avellana HOM05D000978 ORTHO05D000813 4.8e-07 59.7 161 31.1
Gohir.D05G081100 Gossypium hirsutum HOM05D000978 ORTHO05D000813 4.8e-07 59.7 122 35.2
CANSAT54G1931 Cannabis sativa HOM05D000978 ORTHO05D000813 6.3e-07 59.3 158 32.3
Carub.0004s0783 Capsella rubella HOM05D000978 ORTHO05D000813 6.3e-07 59.3 341 23.8
BcaB01g03059 Brassica carinata HOM05D000978 ORTHO05D000813 1.1e-06 58.5 311 26.4
Lalb_Chr19g0136281 Lupinus albus HOM05D000978 ORTHO05D000813 1.1e-06 58.5 117 38.5
SGA_v2.0_scaffold100G29630 Striga asiatica HOM05D000978 ORTHO05D000813 1.1e-06 58.5 343 25.7
CSS0008992 Camellia sinensis var. sinensis HOM05D000978 ORTHO05D000813 1.4e-06 58.2 254 27.6
ClCG03G012160 Citrullus lanatus HOM05D000978 ORTHO05D000813 1.4e-06 58.2 124 33.1
FvH4_3g26430 Fragaria vesca HOM05D000978 ORTHO05D000813 1.4e-06 58.2 112 36.6
Gohir.D09G098500 Gossypium hirsutum HOM05D000978 ORTHO05D000813 1.4e-06 58.2 159 35.2
TWI79G0638 Tripterygium wilfordii HOM05D000978 ORTHO05D000813 1.4e-06 58.2 117 38.5
CsaV3_1G043790 Cucumis sativus L. HOM05D000978 ORTHO05D000813 1.8e-06 57.8 126 32.5
Gorai.006G115500 Gossypium raimondii HOM05D000978 ORTHO05D000813 1.8e-06 57.8 118 39.8
RcHm_v2.0_Chr5g0048491 Rosa chinensis HOM05D000978 ORTHO05D000813 1.8e-06 57.8 117 35.9
CSS0038620 Camellia sinensis var. sinensis HOM05D000978 ORTHO05D000813 2.4e-06 57.4 254 27.6
CiPaw.13G129400 Carya illinoinensis HOM05D000978 ORTHO05D000813 4.1e-06 56.6 231 27.3
MELO3C015067.2 Cucumis melo HOM05D000978 ORTHO05D000813 4.1e-06 56.6 126 32.5
Cpa.g.sc103.8 Carica papaya HOM05D000978 ORTHO05D000813 5.3e-06 56.2 119 33.6
Cfa010170 Carpinus fangiana HOM05D000978 ORTHO05D000813 5.3e-06 56.2 119 35.3
Dinv09383 Davidia involucrata HOM05D000978 ORTHO05D000813 6.9e-06 55.8 275 25.5
FAN11G1728 Fragaria x ananassa HOM05D000978 ORTHO05D000813 6.9e-06 55.8 112 35.7
PGR119G0843 Punica granatum HOM05D000978 ORTHO05D000813 6.9e-06 55.8 122 32.8
Rhsim01G0201100 Rhododendron simsii HOM05D000978 ORTHO05D000813 6.9e-06 55.8 332 25.3
CAN.G689.20 Capsicum annuum HOM05D000978 ORTHO05D000813 9.0e-06 55.5 190 28.4
TAR633G0790 Trochodendron aralioides HOM05D000978 ORTHO05D000813 9.0e-06 55.5 115 36.5


User provided reference genes

Program Settings