Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra09G0003500 Salix brachista HOM05D006101 ORTHO05D007422 1.7e-263 912.1 458 100.0
Potri.009G006200 Populus trichocarpa HOM05D006101 ORTHO05D007422 1.1e-198 696.8 380 91.1
Manes.04G013700 Manihot esculenta HOM05D006101 ORTHO05D007422 3.0e-148 529.3 380 67.9
Atru.chr3.3528 Acer truncatum HOM05D006101 ORTHO05D007422 7.0e-137 491.5 373 64.1
GSVIVG01031479001 Vitis vinifera HOM05D006101 ORTHO05D007422 1.3e-135 487.3 381 64.6
QL01p015279 Quercus lobata HOM05D006101 ORTHO05D007422 1.5e-134 483.8 379 65.2
TWI75G1238 Tripterygium wilfordii HOM05D006101 ORTHO05D007422 3.0e-132 476.1 378 61.9
TAR636G3121 Trochodendron aralioides HOM05D006101 ORTHO05D007422 2.6e-131 473.0 384 59.6
Cfa010291 Carpinus fangiana HOM05D006101 ORTHO05D007422 5.7e-131 471.9 380 61.6
CiPaw.13G123600 Carya illinoinensis HOM05D006101 ORTHO05D007422 6.4e-130 468.4 380 61.1
Haze_23705 Corylus avellana HOM05D006101 ORTHO05D007422 3.2e-129 466.1 378 62.4
Prupe.6G111800 Prunus persica HOM05D006101 ORTHO05D007422 4.1e-129 465.7 376 60.6
Dinv16214 Davidia involucrata HOM05D006101 ORTHO05D007422 5.9e-128 461.8 384 61.5
MD11G1147300 Malus domestica HOM05D006101 ORTHO05D007422 1.5e-126 457.2 376 58.5
CSS0026133 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 2.5e-126 456.4 379 60.4
CSS0020443 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 1.4e-124 450.7 379 60.4
CsaV3_1G013150 Cucumis sativus L. HOM05D006101 ORTHO05D007422 5.2e-124 448.7 376 57.4
RcHm_v2.0_Chr5g0056961 Rosa chinensis HOM05D006101 ORTHO05D007422 1.7e-122 443.7 376 57.4
ClCG03G002470 Citrullus lanatus HOM05D006101 ORTHO05D007422 1.1e-121 441.0 376 56.4
Thecc.09G350300 Theobroma cacao HOM05D006101 ORTHO05D007422 2.0e-120 436.8 376 58.2
Sed0008610 Sechium edule HOM05D006101 ORTHO05D007422 3.5e-120 436.0 380 56.1
Lj2C1009G5 Lonicera japonica HOM05D006101 ORTHO05D007422 1.6e-117 427.2 417 53.7
Lalb_Chr19g0136961 Lupinus albus HOM05D006101 ORTHO05D007422 8.1e-117 424.9 380 53.7
FvH4_3g30770 Fragaria vesca HOM05D006101 ORTHO05D007422 1.1e-116 424.5 376 56.1
Hma1.2p1_0051F.1_g029390 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 2.0e-115 420.2 393 56.0
FAN21G1086 Fragaria x ananassa HOM05D006101 ORTHO05D007422 2.2e-114 416.8 372 55.9
Actinidia03696 Actinidia chinensis HOM05D006101 ORTHO05D007422 3.7e-114 416.0 386 56.5
FAN11G1700 Fragaria x ananassa HOM05D002446 ORTHO05D007422 4.9e-114 415.6 376 54.5
FAN16G0923 Fragaria x ananassa HOM05D006101 ORTHO05D007422 4.9e-114 415.6 371 55.0
Duzib150G0708 Durio zibethinus HOM05D006101 ORTHO05D007422 6.4e-114 415.2 375 54.9
Gohir.D03G139000 Gossypium hirsutum HOM05D006101 ORTHO05D007422 8.3e-114 414.8 376 55.9
Gohir.A03G029500 Gossypium hirsutum HOM05D006101 ORTHO05D007422 1.4e-113 414.1 376 55.3
Phvul.011G085500 Phaseolus vulgaris HOM05D006101 ORTHO05D007422 1.6e-112 410.6 380 52.6
CAN.G546.34 Capsicum annuum HOM05D006101 ORTHO05D007422 2.7e-112 409.8 384 51.6
Ciclev10028403m.g Citrus clementina HOM05D006101 ORTHO05D007422 3.5e-112 409.5 377 54.1
Gorai.003G145800 Gossypium raimondii HOM05D006101 ORTHO05D007422 4.6e-112 409.1 376 55.3
Glyma.11G193400 Glycine max HOM05D006101 ORTHO05D007422 1.0e-111 407.9 380 52.4
FAN25G1259 Fragaria x ananassa HOM05D006101 ORTHO05D007422 1.3e-111 407.5 376 53.7
COL.COLO4_11107 Corchorus olitorius HOM05D006101 ORTHO05D007422 2.3e-111 406.8 375 55.2
Eucgr.B03934 Eucalyptus grandis HOM05D006101 ORTHO05D007422 3.9e-111 406.0 386 54.4
THA.LOC104800579 Tarenaya hassleriana HOM05D006101 ORTHO05D007422 3.9e-111 406.0 375 51.7
CANSAT56G2622 Cannabis sativa HOM05D006101 ORTHO05D007422 1.5e-110 404.1 379 54.9
Lj3g0002990 Lotus japonicus HOM05D006101 ORTHO05D007422 9.5e-110 401.4 374 52.1
Psat0s1387g0080 Pisum sativum HOM05D006101 ORTHO05D007422 1.2e-109 401.0 375 52.5
Medtr4g057493 Medicago truncatula HOM05D006101 ORTHO05D007422 2.1e-109 400.2 374 51.3
PGSC0003DMG400000413 Solanum tuberosum HOM05D006101 ORTHO05D007422 4.7e-109 399.1 384 50.0
Solyc11g066340.2 Solanum lycopersicum HOM05D006101 ORTHO05D007422 8.1e-109 398.3 384 49.2
Ca_30122_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 1.1e-108 397.9 374 51.9
Sopen11g026080 Solanum pennellii HOM05D006101 ORTHO05D007422 1.1e-108 397.9 384 49.2
PGR102G2892 Punica granatum HOM05D006101 ORTHO05D007422 1.8e-108 397.1 372 54.0
VMungo1127G1509 Vigna mungo HOM05D006101 ORTHO05D007422 1.8e-108 397.1 381 51.7
MELO3C004994.2 Cucumis melo HOM05D006101 ORTHO05D007422 2.4e-108 396.7 420 49.8
Ca_02469_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 1.2e-107 394.4 370 52.2
Sp4g10940 Schrenkiella parvula HOM05D006101 ORTHO05D007422 1.2e-107 394.4 376 51.9
Carub.0004s0893 Capsella rubella HOM05D006101 ORTHO05D007422 4.4e-107 392.5 376 51.3
Nitab4.5_0000329g0130 Nicotiana tabacum HOM05D006101 ORTHO05D007422 9.9e-107 391.3 369 50.9
AT2G28130 Arabidopsis thaliana HOM05D006101 ORTHO05D007422 4.1e-105 386.0 382 49.7
BcaC02g10947 Brassica carinata HOM05D006101 ORTHO05D007422 4.1e-105 386.0 375 49.6
PSO339G3309 Papaver somniferum HOM05D006101 ORTHO05D007422 5.4e-105 385.6 378 52.6
HanXRQChr13g0396251 Helianthus annuus HOM05D006101 ORTHO05D007422 9.2e-105 384.8 381 51.4
PSO063G0796 Papaver somniferum HOM05D006101 ORTHO05D007422 2.1e-104 383.6 378 52.9
vmacro14396 Vaccinium macrocarpon HOM05D006101 ORTHO05D007422 4.6e-104 382.5 447 47.7
C04p23380 Brassica napus HOM05D006101 ORTHO05D007422 1.0e-103 381.3 371 49.9
Lsat_1_v5_gn_6_44300 Lactuca sativa HOM05D006101 ORTHO05D007422 1.3e-103 380.9 381 52.0
BcaB02g10150 Brassica carinata HOM05D006101 ORTHO05D007422 2.3e-103 380.2 375 49.1
BolC4t23840H Brassica oleracea HOM05D006101 ORTHO05D007422 6.6e-103 378.6 371 50.1
Cc01_g10370 Coffea canephora HOM05D006101 ORTHO05D007422 3.3e-102 376.3 410 48.5
CARHR120970 Cardamine hirsuta HOM05D006101 ORTHO05D007422 4.3e-102 375.9 367 49.9
MSTRG.21091 Avicennia marina HOM05D006101 ORTHO05D007422 1.2e-101 374.4 384 50.5
Rhsim01G0211100 Rhododendron simsii HOM05D006101 ORTHO05D007422 2.8e-101 373.2 361 55.1
BraA07t29579Z Brassica rapa HOM05D006101 ORTHO05D007422 4.7e-101 372.5 372 48.7
Aqoxy1G01111 Aquilegia oxysepala HOM05D006101 ORTHO05D007422 6.2e-101 372.1 377 49.1
ATR0088G017 Amborella trichopoda HOM05D006101 ORTHO05D007422 3.1e-100 369.8 400 44.8
A07p18660 Brassica napus HOM05D006101 ORTHO05D007422 6.9e-100 368.6 372 48.7
Oeu007313.2 Olea europaea HOM05D006101 ORTHO05D007422 6.9e-100 368.6 418 48.1
Aa31LG5G8010 Aethionema arabicum HOM05D006101 ORTHO05D007422 2.0e-99 367.1 376 48.7
Migut.D02287 Erythranthe guttata HOM05D006101 ORTHO05D007422 1.4e-97 360.9 384 49.5
AL4G22020 Arabidopsis lyrata HOM05D006101 ORTHO05D007422 2.4e-97 360.1 383 49.1
Peaxi162Scf00086g01114 Petunia axillaris HOM05D006101 ORTHO05D007422 1.2e-96 357.8 365 48.2
Sc06g0010850 Simmondsia chinensis HOM05D006101 ORTHO05D007422 1.3e-93 347.8 379 47.2
SalBow4G3219 Salvia bowleyana HOM05D006101 ORTHO05D007422 4.8e-93 345.9 378 47.9
MBI13_g39328_MAGBIO Magnolia biondii HOM05D006101 ORTHO05D007422 4.0e-92 342.8 474 40.9
Thhalv10016576m.g Eutrema salsugineum HOM05D006101 ORTHO05D007422 9.9e-91 338.2 392 44.6
Nn2g13844 Nelumbo nucifera HOM05D006101 ORTHO05D007422 2.2e-90 337.0 321 51.7
CDE09G0605 Ceratophyllum demersum HOM05D006101 ORTHO05D007422 4.9e-90 335.9 378 45.5
SGA_v2.0_scaffold27G11561 Striga asiatica HOM05D006101 ORTHO05D007422 4.2e-89 332.8 384 45.1
EL10Ac9g22610 Beta vulgaris HOM05D006101 ORTHO05D007422 7.1e-89 332.0 381 45.7
AUR62029180 Chenopodium quinoa HOM05D006101 ORTHO05D007422 3.0e-87 326.6 378 45.5
ECA233G2185 Erigeron canadensis HOM05D006101 ORTHO05D007422 5.6e-86 322.4 383 44.4
Os01g0241100 Oryza sativa ssp. japonica HOM05D006101 ORTHO05D007422 1.0e-79 301.6 377 44.0
HPP92_020176 Vanilla planifolia HOM05D006101 ORTHO05D007422 1.3e-74 284.6 379 40.6
unitig_747.g21973 Utricularia gibba HOM05D006101 ORTHO05D007422 1.4e-73 281.2 328 44.2
arahy.Tifrunner.gnm1.ann1.P58SHS Arachis hypogaea HOM05D006101 ORTHO05D007422 4.2e-73 279.6 380 41.3
DCAR_018770 Daucus carota HOM05D006101 ORTHO05D007422 7.9e-72 275.4 291 50.2
arahy.Tifrunner.gnm1.ann1.66BK9V Arachis hypogaea HOM05D006101 ORTHO05D007422 2.3e-71 273.9 383 41.0
Hma1.2p1_0051F.1_g029400 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 6.7e-71 272.3 224 60.3
arahy.Tifrunner.gnm1.ann1.V5BWPF Arachis hypogaea HOM05D006101 ORTHO05D007422 1.1e-70 271.6 365 41.6
Nitab4.5_0003880g0040 Nicotiana tabacum HOM05D006101 ORTHO05D007422 9.7e-70 268.5 385 39.5
Glyma.12G080600 Glycine max HOM05D006101 ORTHO05D007422 2.4e-68 263.8 287 44.9
Dinv29372 Davidia involucrata HOM05D006101 ORTHO05D007422 1.2e-67 261.5 263 52.9
Zm00001eb118850 Zea mays HOM05D006101 ORTHO05D007422 1.0e-66 258.5 359 41.8
AUR62014957 Chenopodium quinoa HOM05D006101 ORTHO05D007422 1.4e-65 254.6 378 38.4
Ah.01g014140 Amaranthus hybridus HOM05D006101 ORTHO05D007422 2.3e-63 247.3 360 39.4
Hund08365 Selenicereus undatus HOM05D006101 ORTHO05D007422 1.5e-62 244.6 369 37.7
HanXRQChr04g0111151 Helianthus annuus HOM05D006101 ORTHO05D007422 3.7e-53 213.4 292 42.1
SHI06228 Sapria himalayana HOM05D006101 ORTHO05D007422 2.4e-52 210.7 191 56.0
VMungo1215G2511 Vigna mungo HOM05D006101 ORTHO05D007422 2.1e-48 197.6 315 37.1
arahy.Tifrunner.gnm1.ann1.KM9ELV Arachis hypogaea HOM05D006101 ORTHO05D007422 2.6e-43 180.6 270 39.3
Mapoly0094s0062 Marchantia polymorpha HOM05D006101 ORTHO05D007422 4.2e-33 146.7 326 28.2
Pp3c4_7040 Physcomitrium patens HOM05D006101 ORTHO05D007422 1.1e-28 132.1 327 27.8
Actinidia20431 Actinidia chinensis HOM05D006101 ORTHO05D007422 2.5e-25 120.9 118 52.5
SEGI_30921 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 1.6e-24 118.2 192 33.3
SEGI_35146 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 6.8e-23 112.8 131 45.0
arahy.Tifrunner.gnm1.ann1.PH2QKZ Arachis hypogaea HOM05D006101 ORTHO05D007422 6.3e-21 106.3 151 37.7
arahy.Tifrunner.gnm1.ann1.88XJ4T Arachis hypogaea HOM05D006101 ORTHO05D007422 1.7e-18 98.2 109 46.8
TPR.G36765 Trifolium pratense HOM05D006101 ORTHO05D007422 1.7e-18 98.2 87 55.2
AagrBONN_evm.TU.Sc2ySwM_228.2481 Anthoceros agrestis HOM05D006101 ORTHO05D007422 1.2e-11 75.5 303 24.8
arahy.Tifrunner.gnm1.ann1.EU9JMW Arachis hypogaea HOM05D006101 ORTHO05D007422 1.6e-11 75.1 69 52.2
arahy.Tifrunner.gnm1.ann1.AAV4SA Arachis hypogaea HOM05D006101 ORTHO05D007422 1.2e-06 58.9 101 35.6


User provided reference genes

Program Settings