Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra09G0001800 Salix brachista HOM05D001145 ORTHO05D038926 1.9e-59 232.3 112 100.0
Potri.004G217200 Populus trichocarpa HOM05D001145 ORTHO05D001415 3.5e-13 78.6 135 38.5
Potri.009G004100 Populus trichocarpa HOM05D001145 ORTHO05D001415 1.0e-12 77.0 135 38.5
Sabra04G0147900 Salix brachista HOM05D001145 ORTHO05D001415 1.0e-12 77.0 135 37.8
Manes.04G012500 Manihot esculenta HOM05D001145 ORTHO05D001415 1.1e-11 73.6 134 36.6
AUR62014978 Chenopodium quinoa HOM05D001145 ORTHO05D001415 2.5e-11 72.4 133 36.8
Haze_23528 Corylus avellana HOM05D001145 ORTHO05D001415 2.5e-11 72.4 120 39.2
TWI75G1305 Tripterygium wilfordii HOM05D001145 ORTHO05D001415 4.2e-11 71.6 134 35.8
FvH4_3g30560 Fragaria vesca HOM05D001145 ORTHO05D001415 9.4e-11 70.5 134 33.6
FAN11G1509 Fragaria x ananassa HOM05D001145 ORTHO05D001415 9.4e-11 70.5 134 33.6
FAN21G3468 Fragaria x ananassa HOM05D001145 ORTHO05D001415 9.4e-11 70.5 134 33.6
AUR62029149 Chenopodium quinoa HOM05D001145 ORTHO05D001415 1.2e-10 70.1 133 36.1
Ah.01g014130 Amaranthus hybridus HOM05D001145 ORTHO05D001415 2.1e-10 69.3 133 36.8
GSVIVG01031457001 Vitis vinifera HOM05D001145 ORTHO05D001415 2.1e-10 69.3 135 36.3
CANSAT64G1016 Cannabis sativa HOM05D001145 ORTHO05D001415 3.6e-10 68.6 134 33.6
Cpa.g.sc47.4 Carica papaya HOM05D001145 ORTHO05D001415 3.6e-10 68.6 133 35.3
Ciclev10028147m.g Citrus clementina HOM05D001145 ORTHO05D001415 3.6e-10 68.6 133 35.3
Lj3g0004371 Lotus japonicus HOM05D001145 ORTHO05D001415 3.6e-10 68.6 134 34.3
Lalb_Chr01g0004621 Lupinus albus HOM05D001145 ORTHO05D001415 3.6e-10 68.6 135 34.8
Peaxi162Scf00983g00004 Petunia axillaris HOM05D001145 ORTHO05D001415 3.6e-10 68.6 109 39.4
Lj1C213G3 Lonicera japonica HOM05D001145 ORTHO05D001415 4.7e-10 68.2 134 35.1
arahy.Tifrunner.gnm1.ann1.4585DL Arachis hypogaea HOM05D001145 ORTHO05D001415 6.1e-10 67.8 133 34.6
arahy.Tifrunner.gnm1.ann1.H5NNU3 Arachis hypogaea HOM05D001145 ORTHO05D001415 6.1e-10 67.8 133 34.6
Cc01_g10220 Coffea canephora HOM05D001145 ORTHO05D001415 6.1e-10 67.8 133 35.3
MD11G1149200 Malus domestica HOM05D001145 ORTHO05D001415 6.1e-10 67.8 133 33.1
RcHm_v2.0_Chr5g0056561 Rosa chinensis HOM05D001145 ORTHO05D001415 6.1e-10 67.8 134 32.8
Cfa010142 Carpinus fangiana HOM05D001145 ORTHO05D001415 1.0e-09 67.0 134 35.1
Duzib150G0831 Durio zibethinus HOM05D001145 ORTHO05D001415 1.0e-09 67.0 133 33.8
Hma1.2p1_0772F.1_g215990 Hydrangea macrophylla HOM05D001145 ORTHO05D001415 1.0e-09 67.0 134 33.6
Prupe.6G113600 Prunus persica HOM05D001145 ORTHO05D001415 1.0e-09 67.0 133 33.1
Eucgr.B03924 Eucalyptus grandis HOM05D001145 ORTHO05D001415 1.4e-09 66.6 133 34.6
Atru.chr3.3503 Acer truncatum HOM05D001145 ORTHO05D001415 1.8e-09 66.2 133 33.1
DCAR_022680 Daucus carota HOM05D001145 ORTHO05D001415 1.8e-09 66.2 133 34.6
SalBow6G5394 Salvia bowleyana HOM05D001145 ORTHO05D001415 1.8e-09 66.2 133 33.8
EL10Ac9g22627 Beta vulgaris HOM05D001145 ORTHO05D001415 2.3e-09 65.9 133 33.8
CSS0024763 Camellia sinensis var. sinensis HOM05D001145 ORTHO05D001415 3.0e-09 65.5 133 33.8
CSS0032816 Camellia sinensis var. sinensis HOM05D001145 ORTHO05D001415 3.0e-09 65.5 133 33.8
PGR102G3025 Punica granatum HOM05D001145 ORTHO05D001415 3.0e-09 65.5 133 33.8
TAR633G2303 Trochodendron aralioides HOM05D001145 ORTHO05D001415 3.0e-09 65.5 133 34.6
Actinidia24152 Actinidia chinensis HOM05D001145 ORTHO05D001415 4.0e-09 65.1 133 33.1
COL.COLO4_19206 Corchorus olitorius HOM05D001145 ORTHO05D001415 4.0e-09 65.1 133 33.8
Thecc.09G298000 Theobroma cacao HOM05D001145 ORTHO05D001415 4.0e-09 65.1 133 33.8
Dinv16229 Davidia involucrata HOM05D001145 ORTHO05D001415 6.8e-09 64.3 134 33.6
CiPaw.13G144900 Carya illinoinensis HOM05D001145 ORTHO05D001415 1.2e-08 63.5 133 34.6
vmacro03252 Vaccinium macrocarpon HOM05D001145 ORTHO05D001415 1.2e-08 63.5 133 33.8
MSTRG.21084 Avicennia marina HOM05D001145 ORTHO05D001415 1.5e-08 63.2 133 33.8
Ca_19325_v3 Cicer arietinum L. HOM05D001145 ORTHO05D001415 1.5e-08 63.2 134 32.1
QL01p014896 Quercus lobata HOM05D001145 ORTHO05D001415 1.5e-08 63.2 133 32.3
Lsat_1_v5_gn_1_64901 Lactuca sativa HOM05D001145 ORTHO05D001415 2.0e-08 62.8 133 32.3
THA.LOC104810883 Tarenaya hassleriana HOM05D001145 ORTHO05D001415 2.0e-08 62.8 132 33.3
CiPaw.14G107000 Carya illinoinensis HOM05D001145 ORTHO05D001415 2.6e-08 62.4 29 89.7
Psat7g223720 Pisum sativum HOM05D001145 ORTHO05D001415 2.6e-08 62.4 134 30.6
Sc21g0000340 Simmondsia chinensis HOM05D001145 ORTHO05D001415 2.6e-08 62.4 31 83.9
ClCG01G013870 Citrullus lanatus HOM05D001145 ORTHO05D001415 3.4e-08 62.0 133 32.3
HanXRQChr11g0346011 Helianthus annuus HOM05D001145 ORTHO05D001415 3.4e-08 62.0 133 31.6
CARHR151160 Cardamine hirsuta HOM05D001145 ORTHO05D001415 4.4e-08 61.6 132 34.1
ECA248G1672 Erigeron canadensis HOM05D001145 ORTHO05D001415 4.4e-08 61.6 133 31.6
Medtr4g057200 Medicago truncatula HOM05D001145 ORTHO05D001415 4.4e-08 61.6 134 31.3
PSO339G1579 Papaver somniferum HOM05D001145 ORTHO05D001415 4.4e-08 61.6 133 31.6
PSO801G0093 Papaver somniferum HOM05D001145 ORTHO05D001415 4.4e-08 61.6 133 31.6
TPR.G36804 Trifolium pratense HOM05D001145 ORTHO05D001415 4.4e-08 61.6 134 31.3
arahy.Tifrunner.gnm1.ann1.3KX6TS Arachis hypogaea HOM05D001145 ORTHO05D038926 5.7e-08 61.2 36 66.7
CsaV3_1G014120 Cucumis sativus L. HOM05D001145 ORTHO05D001415 5.7e-08 61.2 133 31.6
Gohir.A07G105000 Gossypium hirsutum HOM05D001145 ORTHO05D001415 5.7e-08 61.2 133 31.6
Gohir.D07G109100 Gossypium hirsutum HOM05D001145 ORTHO05D001415 5.7e-08 61.2 133 31.6
Gorai.001G117200 Gossypium raimondii HOM05D001145 ORTHO05D001415 5.7e-08 61.2 133 31.6
Lj2A1005T32 Lonicera japonica HOM05D001145 ORTHO05D001415 5.7e-08 61.2 133 33.1
Nitab4.5_0000173g0160 Nicotiana tabacum HOM05D001145 ORTHO05D001415 5.7e-08 61.2 133 33.1
Nitab4.5_0009628g0010 Nicotiana tabacum HOM05D001145 ORTHO05D001415 5.7e-08 61.2 133 33.1
unitig_0.g1496 Utricularia gibba HOM05D001145 ORTHO05D001415 5.7e-08 61.2 133 32.3
unitig_747.g21970 Utricularia gibba HOM05D001145 ORTHO05D001415 5.7e-08 61.2 136 31.6
AL5G23340 Arabidopsis lyrata HOM05D001145 ORTHO05D001415 7.5e-08 60.8 132 33.3
Thhalv10002475m.g Eutrema salsugineum HOM05D001145 ORTHO05D001415 7.5e-08 60.8 132 33.3
Phvul.011G086700 Phaseolus vulgaris HOM05D001145 ORTHO05D001415 7.5e-08 60.8 133 30.8
Sp5g16340 Schrenkiella parvula HOM05D001145 ORTHO05D001415 7.5e-08 60.8 132 33.3
AUR62029155 Chenopodium quinoa HOM05D001145 ORTHO05D001415 9.8e-08 60.5 31 77.4
MELO3C004867.2 Cucumis melo HOM05D001145 ORTHO05D001415 9.8e-08 60.5 133 30.8
Glyma.12G082100 Glycine max HOM05D001145 ORTHO05D001415 9.8e-08 60.5 133 32.3
AT3G44880 Arabidopsis thaliana HOM05D001145 ORTHO05D001415 1.3e-07 60.1 132 33.3
VMungo1127G2205 Vigna mungo HOM05D001145 ORTHO05D001415 1.3e-07 60.1 133 30.8
Carub.0005s1062 Capsella rubella HOM05D001145 ORTHO05D001415 1.7e-07 59.7 132 33.3
Glyma.11G192300 Glycine max HOM05D001145 ORTHO05D001415 2.2e-07 59.3 133 31.6
Nn2g13867 Nelumbo nucifera HOM05D001145 ORTHO05D001415 2.2e-07 59.3 140 30.0
Rhsim13G0101100 Rhododendron simsii HOM05D001145 ORTHO05D001415 2.2e-07 59.3 29 79.3
Aqoxy2G01627 Aquilegia oxysepala HOM05D001145 ORTHO05D001415 2.8e-07 58.9 133 30.1
BcaB05g23052 Brassica carinata HOM05D001145 ORTHO05D001415 2.8e-07 58.9 132 32.6
BcaC09g49659 Brassica carinata HOM05D001145 ORTHO05D001415 2.8e-07 58.9 132 32.6
A01p26740 Brassica napus HOM05D001145 ORTHO05D001415 2.8e-07 58.9 132 32.6
C01p34130 Brassica napus HOM05D001145 ORTHO05D001415 2.8e-07 58.9 132 32.6
BolC1t03382H Brassica oleracea HOM05D001145 ORTHO05D001415 2.8e-07 58.9 132 32.6
BraA01t02603Z Brassica rapa HOM05D001145 ORTHO05D001415 2.8e-07 58.9 132 32.6
Oeu034670.1 Olea europaea HOM05D001145 ORTHO05D001415 2.8e-07 58.9 28 78.6
Sed0024158 Sechium edule HOM05D001145 ORTHO05D001415 3.7e-07 58.5 133 30.8
Migut.D02297 Erythranthe guttata HOM05D001145 ORTHO05D001415 4.8e-07 58.2 132 31.8
Solyc11g066440.2 Solanum lycopersicum HOM05D001145 ORTHO05D001415 4.8e-07 58.2 133 31.6
Sopen11g026190 Solanum pennellii HOM05D001145 ORTHO05D001415 4.8e-07 58.2 133 31.6
ATR0043G010 Amborella trichopoda HOM05D001145 ORTHO05D001415 6.3e-07 57.8 133 31.6
CAN.G546.53 Capsicum annuum HOM05D001145 ORTHO05D001415 6.3e-07 57.8 133 31.6
Zm00001eb003760 Zea mays HOM05D001145 ORTHO05D001415 8.3e-07 57.4 135 30.4
CDE07G1511 Ceratophyllum demersum HOM05D001145 ORTHO05D001415 1.1e-06 57.0 133 31.6
SGA_v2.0_scaffold27G11573 Striga asiatica HOM05D001145 ORTHO05D001415 1.4e-06 56.6 28 78.6
PGSC0003DMG400000457 Solanum tuberosum HOM05D001145 ORTHO05D001415 2.4e-06 55.8 133 30.8
Aa31LG4G14210 Aethionema arabicum HOM05D001145 ORTHO05D001415 3.1e-06 55.5 132 30.3
Os03g0146400 Oryza sativa ssp. japonica HOM05D001145 ORTHO05D001415 3.1e-06 55.5 134 29.1
Hma1.2p1_0772F.1_g216000 Hydrangea macrophylla HOM05D001145 ORTHO05D001415 4.1e-06 55.1 29 72.4
arahy.Tifrunner.gnm1.ann1.GG70IM Arachis hypogaea HOM05D001145 ORTHO05D082386 7.0e-06 54.3 29 69.0
arahy.Tifrunner.gnm1.ann1.SB88KA Arachis hypogaea HOM05D006259 ORTHO05D007804 9.1e-06 53.9 34 58.8


User provided reference genes

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