Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra08G0156600 Salix brachista HOM05D005247 ORTHO05D006571 8.3e-168 593.6 289 100.0
Potri.008G205300 Populus trichocarpa HOM05D005247 ORTHO05D006571 3.4e-137 491.9 265 92.1
Manes.15G016200 Manihot esculenta HOM05D005247 ORTHO05D006571 6.9e-90 334.7 206 77.7
QL06p007567 Quercus lobata HOM05D005247 ORTHO05D006571 1.9e-87 326.6 276 62.0
Ciclev10005079m.g Citrus clementina HOM05D005247 ORTHO05D006571 2.7e-86 322.8 276 60.9
Duzib151G0039 Durio zibethinus HOM05D005247 ORTHO05D006571 6.1e-86 321.6 276 62.3
Gorai.006G257600 Gossypium raimondii HOM05D005247 ORTHO05D006571 3.9e-85 318.9 269 61.0
Atru.chr4.2766 Acer truncatum HOM05D005247 ORTHO05D006571 4.3e-84 315.5 284 60.2
Thecc.04G278500 Theobroma cacao HOM05D005247 ORTHO05D006571 2.2e-83 313.2 278 62.2
Atru.chr4.2761 Acer truncatum HOM05D005247 ORTHO05D006571 3.7e-83 312.4 284 59.9
TWI09G0062 Tripterygium wilfordii HOM05D005247 ORTHO05D006571 8.2e-83 311.2 274 59.1
Gohir.A09G233900 Gossypium hirsutum HOM05D005247 ORTHO05D006571 1.1e-82 310.8 269 60.2
RcHm_v2.0_Chr4g0421281 Rosa chinensis HOM05D005247 ORTHO05D006571 4.1e-82 308.9 274 59.9
Gohir.D09G234700 Gossypium hirsutum HOM05D005247 ORTHO05D006571 2.0e-81 306.6 269 59.5
Prupe.1G141100 Prunus persica HOM05D005247 ORTHO05D006571 2.0e-81 306.6 277 58.5
MD16G1174400 Malus domestica HOM05D005247 ORTHO05D006571 2.6e-81 306.2 278 58.6
CiPaw.02G086000 Carya illinoinensis HOM05D005247 ORTHO05D006571 3.4e-81 305.8 281 57.3
Dinv44420 Davidia involucrata HOM05D005247 ORTHO05D006571 1.3e-80 303.9 289 56.4
FAN12G4219 Fragaria x ananassa HOM05D005247 ORTHO05D006571 1.7e-80 303.5 200 71.0
Cfa015350 Carpinus fangiana HOM05D005247 ORTHO05D006571 2.9e-80 302.8 294 55.4
MD13G1173000 Malus domestica HOM05D005247 ORTHO05D006571 3.8e-80 302.4 280 58.2
Lalb_Chr12g0196461 Lupinus albus HOM05D005247 ORTHO05D006571 1.1e-79 300.8 265 55.8
FvH4_4g17340 Fragaria vesca HOM05D005247 ORTHO05D006571 1.9e-79 300.1 193 72.5
Eucgr.H03774 Eucalyptus grandis HOM05D005247 ORTHO05D006571 3.2e-79 299.3 278 57.9
Actinidia23422 Actinidia chinensis HOM05D005247 ORTHO05D006571 5.5e-79 298.5 189 70.9
FAN17G1560 Fragaria x ananassa HOM05D005247 ORTHO05D006571 5.5e-79 298.5 284 56.0
Psat5g125320 Pisum sativum HOM05D005247 ORTHO05D006571 7.2e-79 298.1 266 57.1
FAN07G0437 Fragaria x ananassa HOM05D005247 ORTHO05D006571 9.4e-79 297.7 284 56.3
vmacro08197 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 9.4e-79 297.7 225 63.1
Dinv38319 Davidia involucrata HOM05D005247 ORTHO05D006571 1.2e-78 297.4 283 57.6
TAR362G0112 Trochodendron aralioides HOM05D005247 ORTHO05D006571 1.2e-78 297.4 283 56.5
Medtr3g069790 Medicago truncatula HOM05D005247 ORTHO05D006571 2.1e-78 296.6 266 56.8
AT3G21465 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 2.7e-78 296.2 273 54.9
Glyma.07G251000 Glycine max HOM05D005247 ORTHO05D006571 4.7e-78 295.4 270 56.7
Glyma.17G023300 Glycine max HOM05D005247 ORTHO05D006571 4.7e-78 295.4 267 56.6
EL10Ac3g06569 Beta vulgaris HOM05D005247 ORTHO05D006571 6.1e-78 295.0 277 55.6
PGR142G1936 Punica granatum HOM05D005247 ORTHO05D006571 7.9e-78 294.7 283 54.8
THA.LOC104802559 Tarenaya hassleriana HOM05D005247 ORTHO05D006571 1.0e-77 294.3 276 55.4
FAN12G3211 Fragaria x ananassa HOM05D005247 ORTHO05D006571 1.4e-77 293.9 191 71.2
Phvul.003G101400 Phaseolus vulgaris HOM05D005247 ORTHO05D006571 1.8e-77 293.5 268 55.2
TPR.G28788 Trifolium pratense HOM05D005247 ORTHO05D006571 1.8e-77 293.5 266 56.4
Hma1.2p1_0078F.1_g040780 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 5.1e-77 292.0 281 53.4
Lj4g0024405 Lotus japonicus HOM05D005247 ORTHO05D006571 5.1e-77 292.0 267 55.8
Cpa.g.sc16.124 Carica papaya HOM05D005247 ORTHO05D006571 8.8e-77 291.2 275 56.4
Carub.0003s2149 Capsella rubella HOM05D005247 ORTHO05D006571 1.5e-76 290.4 278 54.0
TAR633G1275 Trochodendron aralioides HOM05D005247 ORTHO05D006571 2.0e-76 290.0 282 56.0
AL3G35540 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 4.4e-76 288.9 272 52.9
Sc13g0003580 Simmondsia chinensis HOM05D005247 ORTHO05D006571 4.4e-76 288.9 278 54.7
CSS0036429 Camellia sinensis var. sinensis HOM05D005247 ORTHO05D006571 5.7e-76 288.5 193 67.9
Sp3g19500 Schrenkiella parvula HOM05D005247 ORTHO05D006571 5.7e-76 288.5 270 54.4
Ca_21545_v3 Cicer arietinum L. HOM05D005247 ORTHO05D006571 1.3e-75 287.3 270 55.6
BcaC05g28162 Brassica carinata HOM05D005247 ORTHO05D006571 2.2e-75 286.6 265 56.2
C05p41980 Brassica napus HOM05D005247 ORTHO05D006571 2.2e-75 286.6 265 56.2
Nn7g38324 Nelumbo nucifera HOM05D005247 ORTHO05D006571 2.2e-75 286.6 285 54.0
CANSAT78G0941 Cannabis sativa HOM05D005247 ORTHO05D006571 2.8e-75 286.2 284 54.6
A05p27200 Brassica napus HOM05D005247 ORTHO05D006571 3.7e-75 285.8 266 55.6
Carub.0007s2616 Capsella rubella HOM05D005247 ORTHO05D006571 8.2e-75 284.6 272 54.0
VMungo1215G2055 Vigna mungo HOM05D005247 ORTHO05D006571 8.2e-75 284.6 189 68.3
Aqoxy5G00647 Aquilegia oxysepala HOM05D005247 ORTHO05D006571 1.1e-74 284.3 286 54.5
AUR62040732 Chenopodium quinoa HOM05D005247 ORTHO05D006571 1.8e-74 283.5 265 55.8
Rhsim04G0216900 Rhododendron simsii HOM05D005247 ORTHO05D006571 1.8e-74 283.5 207 63.3
Hund20585 Selenicereus undatus HOM05D005247 ORTHO05D006571 3.1e-74 282.7 276 52.2
Aa31LG9G1800 Aethionema arabicum HOM05D005247 ORTHO05D006571 4.1e-74 282.3 269 55.8
TPR.G29803 Trifolium pratense HOM05D005247 ORTHO05D006571 4.1e-74 282.3 270 55.6
GSVIVG01017794001 Vitis vinifera HOM05D005247 ORTHO05D006571 9.1e-74 281.2 201 69.7
arahy.Tifrunner.gnm1.ann1.A4UT9N Arachis hypogaea HOM05D005247 ORTHO05D006571 1.2e-73 280.8 267 53.6
BraA05t21609Z Brassica rapa HOM05D005247 ORTHO05D006571 1.2e-73 280.8 275 54.5
vmacro08194 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 1.2e-73 280.8 241 58.1
CARHR290040 Cardamine hirsuta HOM05D005247 ORTHO05D006571 1.5e-73 280.4 269 53.2
AUR62043783 Chenopodium quinoa HOM05D005247 ORTHO05D006571 1.5e-73 280.4 265 55.1
BolC5t32932H Brassica oleracea HOM05D005247 ORTHO05D006571 2.6e-73 279.6 277 54.9
arahy.Tifrunner.gnm1.ann1.8Y06GW Arachis hypogaea HOM05D005247 ORTHO05D006571 3.5e-73 279.3 267 52.8
BcaB06g26247 Brassica carinata HOM05D005247 ORTHO05D006571 3.5e-73 279.3 265 54.3
DCAR_024549 Daucus carota HOM05D005247 ORTHO05D006571 7.7e-73 278.1 182 69.8
AT4G15640 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 1.7e-72 276.9 269 53.9
Nitab4.5_0001357g0080 Nicotiana tabacum HOM05D005247 ORTHO05D006571 2.2e-72 276.6 284 52.5
AL7G39790 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 3.8e-72 275.8 185 67.6
Nitab4.5_0006478g0050 Nicotiana tabacum HOM05D005247 ORTHO05D006571 6.5e-72 275.0 283 51.9
Nitab4.5_0009436g0020 Nicotiana tabacum HOM05D005247 ORTHO05D006571 8.5e-72 274.6 283 52.3
ClCG05G005860 Citrullus lanatus HOM05D005247 ORTHO05D006571 1.9e-71 273.5 275 52.4
Sp7g13890 Schrenkiella parvula HOM05D005247 ORTHO05D006571 4.2e-71 272.3 274 53.3
Thhalv10025397m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 9.4e-71 271.2 282 51.8
CAN.G311.32 Capsicum annuum HOM05D005247 ORTHO05D006571 2.1e-70 270.0 205 61.0
BcaB04g18303 Brassica carinata HOM05D005247 ORTHO05D006571 3.6e-70 269.2 274 52.9
Nitab4.5_0000343g0170 Nicotiana tabacum HOM05D005247 ORTHO05D006571 4.7e-70 268.9 283 52.3
CsaV3_3G014210 Cucumis sativus L. HOM05D005247 ORTHO05D006571 8.0e-70 268.1 277 51.3
ECA234G2791 Erigeron canadensis HOM05D005247 ORTHO05D006571 8.0e-70 268.1 193 65.8
Solyc07g041930.3 Solanum lycopersicum HOM05D005247 ORTHO05D006571 8.0e-70 268.1 279 51.6
Sopen07g021430 Solanum pennellii HOM05D005247 ORTHO05D006571 2.3e-69 266.5 217 58.5
Lsat_1_v5_gn_4_34220 Lactuca sativa HOM05D005247 ORTHO05D006571 2.0e-68 263.5 193 65.8
HanXRQChr17g0562111 Helianthus annuus HOM05D005247 ORTHO05D006571 5.7e-68 261.9 193 63.7
Haze_01257 Corylus avellana HOM05D005247 ORTHO05D006571 2.2e-67 260.0 343 46.4
Ah.13g074520 Amaranthus hybridus HOM05D005247 ORTHO05D006571 2.8e-67 259.6 185 61.6
MSTRG.21809 Avicennia marina HOM05D005247 ORTHO05D006571 2.8e-67 259.6 193 61.7
Cc03_g02260 Coffea canephora HOM05D005247 ORTHO05D006571 4.8e-67 258.8 281 50.2
MELO3C006614.2 Cucumis melo HOM05D005247 ORTHO05D006571 1.4e-66 257.3 279 48.7
Peaxi162Scf00127g00146 Petunia axillaris HOM05D005247 ORTHO05D006571 1.4e-66 257.3 187 60.4
Sed0017520 Sechium edule HOM05D005247 ORTHO05D006571 4.1e-66 255.8 271 50.6
PSO541G1846 Papaver somniferum HOM05D005247 ORTHO05D006571 5.3e-66 255.4 294 47.3
Zm00001eb330100 Zea mays HOM05D005247 ORTHO05D006571 5.3e-66 255.4 196 61.2
Migut.N00115 Erythranthe guttata HOM05D005247 ORTHO05D006571 7.0e-66 255.0 211 57.3
PSO675G0879 Papaver somniferum HOM05D005247 ORTHO05D006571 1.3e-64 250.8 294 47.3
Thhalv10021000m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 1.1e-63 247.7 265 48.7
SGA_v2.0_scaffold89G27537 Striga asiatica HOM05D005247 ORTHO05D006571 2.5e-63 246.5 207 56.5
BolC8t48291H Brassica oleracea HOM05D005247 ORTHO05D006571 5.5e-63 245.4 208 57.7
Os07g0668200 Oryza sativa ssp. japonica HOM05D005247 ORTHO05D006571 4.0e-61 239.2 215 53.0
unitig_748.g7195 Utricularia gibba HOM05D005247 ORTHO05D006571 1.2e-60 237.7 207 54.6
ATR0706G238 Amborella trichopoda HOM05D005247 ORTHO05D006571 3.7e-59 232.6 207 53.6
Eucgr.H03753 Eucalyptus grandis HOM05D005247 ORTHO05D006571 1.1e-58 231.1 179 61.5
SGA_v2.0_scaffold175G39318 Striga asiatica HOM05D005247 ORTHO05D006571 2.2e-56 223.4 193 54.9
RcHm_v2.0_Chr4g0421901 Rosa chinensis HOM05D005247 ORTHO05D006571 6.5e-56 221.9 270 47.0
Hma1.2p1_3003F.1_g331535 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 2.6e-44 183.3 190 50.5
COL.COLO4_13921 Corchorus olitorius HOM05D005247 ORTHO05D006571 4.9e-43 179.1 278 42.4
Eucgr.C02045 Eucalyptus grandis HOM05D005247 ORTHO05D006571 1.4e-42 177.6 132 65.2
SHI00299 Sapria himalayana HOM05D005247 ORTHO05D000987 6.6e-40 168.7 232 42.7
Lj6A670T87 Lonicera japonica HOM05D005247 ORTHO05D006571 3.4e-36 156.4 203 44.8
Psat5g177080 Pisum sativum HOM05D005247 ORTHO05D006571 1.3e-35 154.5 166 48.8
Psat4g226360 Pisum sativum HOM05D005247 ORTHO05D006571 5.2e-29 132.5 192 41.1
Psat6g103040 Pisum sativum HOM05D005247 ORTHO05D006571 1.3e-24 117.9 77 67.5
SEGI_33954 Sequoiadendron giganteum HOM05D005247 ORTHO05D000001 1.5e-23 114.4 141 38.3
Mapoly0002s0143 Marchantia polymorpha HOM05D005247 ORTHO05D006571 9.5e-23 111.7 198 29.3
Eucgr.F02603 Eucalyptus grandis HOM05D005247 ORTHO05D006571 1.8e-21 107.5 68 70.6
BcaC07g37894 Brassica carinata HOM05D005247 ORTHO05D006571 3.7e-19 99.8 213 36.2
Pp3c14_15200 Physcomitrium patens HOM05D005247 ORTHO05D006571 3.2e-18 96.7 202 31.7
BraA08t33173Z Brassica rapa HOM05D005247 ORTHO05D006571 1.0e-16 91.7 66 63.6
HPP92_013697 Vanilla planifolia HOM05D005247 ORTHO05D006571 1.6e-14 84.3 66 59.1
SMO202G0041 Selaginella moellendorffii HOM05D005247 ORTHO05D006571 8.1e-14 82.0 135 31.9
CBR_g30222 Chara braunii HOM05D005247 ORTHO05D006571 2.6e-12 77.0 211 23.2
AagrBONN_evm.TU.Sc2ySwM_228.2885 Anthoceros agrestis HOM05D005247 ORTHO05D006571 8.4e-11 72.0 99 38.4
CAN.G640.21 Capsicum annuum HOM05D005247 ORTHO05D006571 8.4e-11 72.0 68 51.5
Eucgr.H03758 Eucalyptus grandis HOM05D005247 ORTHO05D006571 9.3e-10 68.6 44 63.6


User provided reference genes

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