Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra08G0153500 Salix brachista HOM05D003821 ORTHO05D004449 3.1e-66 255.0 129 100.0
Nitab4.5_0003546g0070 Nicotiana tabacum HOM05D003821 ORTHO05D004449 7.0e-18 94.4 128 46.9
vmacro15236 Vaccinium macrocarpon HOM05D003821 ORTHO05D004449 8.6e-16 87.4 129 47.3
Rhsim02G0009100 Rhododendron simsii HOM05D003821 ORTHO05D004449 1.9e-15 86.3 130 46.9
Haze_01204 Corylus avellana HOM05D003821 ORTHO05D004449 9.5e-15 84.0 134 43.3
DCAR_013986 Daucus carota HOM05D003821 ORTHO05D004449 1.6e-14 83.2 131 45.0
FAN07G0841 Fragaria x ananassa HOM05D003821 ORTHO05D004449 8.0e-14 80.9 128 42.2
Sabra10G0014100 Salix brachista HOM05D003821 ORTHO05D004449 8.0e-14 80.9 176 36.9
Haze_04896 Corylus avellana HOM05D003821 ORTHO05D004449 1.4e-13 80.1 115 44.3
Rhsim04G0221500 Rhododendron simsii HOM05D003821 ORTHO05D004449 3.1e-13 79.0 145 42.1
vmacro08148 Vaccinium macrocarpon HOM05D003821 ORTHO05D004449 3.1e-13 79.0 152 37.5
Medtr1g088760 Medicago truncatula HOM05D003821 ORTHO05D004449 4.0e-13 78.6 120 44.2
TPR.G33980 Trifolium pratense HOM05D003821 ORTHO05D004449 4.0e-13 78.6 120 45.8
Nitab4.5_0000191g0110 Nicotiana tabacum HOM05D003821 ORTHO05D004449 8.9e-13 77.4 129 45.7
Manes.15G012400 Manihot esculenta HOM05D003821 ORTHO05D004449 1.2e-12 77.0 128 43.0
SGA_v2.0_scaffold91G27999 Striga asiatica HOM05D003821 ORTHO05D004449 2.0e-12 76.3 134 41.0
Hund20554 Selenicereus undatus HOM05D003821 ORTHO05D004449 7.5e-12 74.3 120 45.0
QL10p053326 Quercus lobata HOM05D003821 ORTHO05D004449 2.2e-11 72.8 120 40.0
QL10p054532 Quercus lobata HOM05D003821 ORTHO05D004449 2.2e-11 72.8 120 40.0
Atru.chr4.2835 Acer truncatum HOM05D003821 ORTHO05D004449 2.9e-11 72.4 147 37.4
TPR.G9594 Trifolium pratense HOM05D003821 ORTHO05D004449 2.9e-11 72.4 131 42.7
Nitab4.5_0004438g0100 Nicotiana tabacum HOM05D003821 ORTHO05D004449 6.4e-11 71.2 128 41.4
SalBow2G1159 Salvia bowleyana HOM05D003821 ORTHO05D004449 6.4e-11 71.2 127 44.1
FAN15G2810 Fragaria x ananassa HOM05D003821 ORTHO05D004449 8.3e-11 70.9 124 37.9
FAN24G2279 Fragaria x ananassa HOM05D003821 ORTHO05D004449 8.3e-11 70.9 124 37.9
Oeu027727.1 Olea europaea HOM05D003821 ORTHO05D004449 8.3e-11 70.9 127 39.4
Sed0001615 Sechium edule HOM05D003821 ORTHO05D004449 8.3e-11 70.9 129 40.3
MSTRG.24794 Avicennia marina HOM05D003821 ORTHO05D004449 1.1e-10 70.5 126 38.9
VMungo1309G1076 Vigna mungo HOM05D003821 ORTHO05D004449 1.1e-10 70.5 119 38.7
Aa31LG10G6300 Aethionema arabicum HOM05D003821 ORTHO05D004449 1.4e-10 70.1 134 41.0
CAN.G185.14 Capsicum annuum HOM05D003821 ORTHO05D004449 1.9e-10 69.7 129 40.3
FAN27G2508 Fragaria x ananassa HOM05D003821 ORTHO05D004449 2.4e-10 69.3 124 37.1
Oeu026313.1 Olea europaea HOM05D003821 ORTHO05D004449 2.4e-10 69.3 129 40.3
PGSC0003DMG400022856 Solanum tuberosum HOM05D003821 ORTHO05D004449 2.4e-10 69.3 132 41.7
Migut.G00164 Erythranthe guttata HOM05D003821 ORTHO05D004449 5.4e-10 68.2 127 40.2
DCAR_002813 Daucus carota HOM05D003821 ORTHO05D004449 7.0e-10 67.8 126 36.5
BraA08t33190Z Brassica rapa HOM05D003821 ORTHO05D004449 9.2e-10 67.4 129 41.1
Actinidia32231 Actinidia chinensis HOM05D003821 ORTHO05D004449 1.2e-09 67.0 129 38.8
Cpa.g.sc9.208 Carica papaya HOM05D003821 ORTHO05D004449 1.2e-09 67.0 126 41.3
FAN20G2567 Fragaria x ananassa HOM05D000897 ORTHO05D000716 1.6e-09 66.6 123 36.6
Gorai.004G142200 Gossypium raimondii HOM05D003821 ORTHO05D004449 1.6e-09 66.6 129 34.9
MSTRG.3917 Avicennia marina HOM05D003821 ORTHO05D004449 2.0e-09 66.2 127 38.6
CAN.G484.32 Capsicum annuum HOM05D003821 ORTHO05D004449 2.0e-09 66.2 135 44.4
Ciclev10007067m.g Citrus clementina HOM05D003821 ORTHO05D004449 2.7e-09 65.9 136 36.0
FAN12G1096 Fragaria x ananassa HOM05D003821 ORTHO05D004449 2.7e-09 65.9 128 36.7
arahy.Tifrunner.gnm1.ann1.LH51N9 Arachis hypogaea HOM05D003821 ORTHO05D004449 7.8e-09 64.3 123 39.8
CiPaw.08G097300 Carya illinoinensis HOM05D003821 ORTHO05D004449 7.8e-09 64.3 120 38.3
A03p49340 Brassica napus HOM05D003821 ORTHO05D004449 1.0e-08 63.9 122 40.2
Hma1.2p1_0078F.1_g040550 Hydrangea macrophylla HOM05D003821 ORTHO05D004449 1.0e-08 63.9 127 40.9
TWI53G1984 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 1.3e-08 63.5 126 37.3
Ca_10352_v3 Cicer arietinum L. HOM05D003821 ORTHO05D004449 2.3e-08 62.8 128 36.7
SGA_v2.0_scaffold147G36288 Striga asiatica HOM05D003821 ORTHO05D004449 2.3e-08 62.8 127 37.0
TAR362G0968 Trochodendron aralioides HOM05D003821 ORTHO05D004449 3.0e-08 62.4 125 33.6
SGA_v2.0_scaffold428G51522 Striga asiatica HOM05D003821 ORTHO05D004449 3.9e-08 62.0 43 74.4
TWI09G0102 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 3.9e-08 62.0 126 36.5
arahy.Tifrunner.gnm1.ann1.UD53LE Arachis hypogaea HOM05D003821 ORTHO05D004449 5.0e-08 61.6 123 36.6
COL.COLO4_13871 Corchorus olitorius HOM05D003821 ORTHO05D004449 5.0e-08 61.6 127 36.2
RcHm_v2.0_Chr4g0422221 Rosa chinensis HOM05D003821 ORTHO05D004449 5.0e-08 61.6 44 68.2
CiPaw.07G106400 Carya illinoinensis HOM05D003821 ORTHO05D004449 6.6e-08 61.2 120 37.5
A08p11990 Brassica napus HOM05D003821 ORTHO05D004449 8.6e-08 60.8 130 40.0
Gorai.007G237400 Gossypium raimondii HOM05D003821 ORTHO05D004449 8.6e-08 60.8 61 52.5
Psat3g022560 Pisum sativum HOM05D003821 ORTHO05D004449 1.1e-07 60.5 129 38.0
CSS0027872 Camellia sinensis var. sinensis HOM05D003821 ORTHO05D004449 1.5e-07 60.1 54 63.0
FAN17G0959 Fragaria x ananassa HOM05D003821 ORTHO05D004449 1.5e-07 60.1 44 68.2
Phvul.009G247900 Phaseolus vulgaris HOM05D003821 ORTHO05D004449 1.5e-07 60.1 119 37.8
AUR62008616 Chenopodium quinoa HOM05D003821 ORTHO05D004449 3.3e-07 58.9 128 32.8
Potri.010G025000 Populus trichocarpa HOM05D003821 ORTHO05D004449 3.3e-07 58.9 129 38.0
Carub.0007s2585 Capsella rubella HOM05D003821 ORTHO05D004449 4.3e-07 58.5 123 36.6
Hma1.2p1_0209F.1_g088610 Hydrangea macrophylla HOM05D003821 ORTHO05D004449 7.3e-07 57.8 53 60.4
Medtr7g108610 Medicago truncatula HOM05D003821 ORTHO05D004449 9.5e-07 57.4 63 55.6
AT4G15802 Arabidopsis thaliana HOM05D003821 ORTHO05D004449 1.2e-06 57.0 129 36.4
Nitab4.5_0000570g0120 Nicotiana tabacum HOM05D003821 ORTHO05D004449 1.2e-06 57.0 45 64.4
AL7G39490 Arabidopsis lyrata HOM05D003821 ORTHO05D004449 1.6e-06 56.6 129 36.4
BraA01t02079Z Brassica rapa HOM05D000802 ORTHO05D013138 2.1e-06 56.2 129 37.2
CARHR290310 Cardamine hirsuta HOM05D003821 ORTHO05D004449 2.1e-06 56.2 129 34.9
AUR62033168 Chenopodium quinoa HOM05D003821 ORTHO05D004449 2.8e-06 55.8 128 32.0
Potri.008G208100 Populus trichocarpa HOM05D003821 ORTHO05D004449 2.8e-06 55.8 129 38.0
MELO3C032813.2 Cucumis melo HOM05D003821 ORTHO05D004449 3.6e-06 55.5 55 58.2
Glyma.03G213100 Glycine max HOM05D003821 ORTHO05D004449 3.6e-06 55.5 48 58.3
RcHm_v2.0_Chr6g0293541 Rosa chinensis HOM05D003821 ORTHO05D004449 3.6e-06 55.5 126 34.9
Manes.05G064201 Manihot esculenta HOM05D003821 ORTHO05D004449 4.7e-06 55.1 37 70.3


User provided reference genes

Program Settings