Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra08G0153100 Salix brachista HOM05D006118 ORTHO05D007750 8.7e-190 666.8 326 100.0
CiPaw.16G067300 Carya illinoinensis HOM05D006118 ORTHO05D007750 3.9e-150 535.0 323 80.8
GSVIVG01035487001 Vitis vinifera HOM05D006118 ORTHO05D007750 8.8e-150 533.9 324 81.5
MD08G1073200 Malus domestica HOM05D006118 ORTHO05D007750 2.2e-148 529.3 321 80.1
Thecc.04G313700 Theobroma cacao HOM05D006118 ORTHO05D007750 1.1e-147 526.9 319 79.9
TAR624G0180 Trochodendron aralioides HOM05D006118 ORTHO05D007750 1.4e-147 526.6 324 80.9
Ciclev10005468m.g Citrus clementina HOM05D006118 ORTHO05D007750 2.4e-147 525.8 324 81.2
Gohir.D02G064600 Gossypium hirsutum HOM05D006118 ORTHO05D007750 5.3e-147 524.6 319 79.6
Gorai.005G073100 Gossypium raimondii HOM05D006118 ORTHO05D007750 1.2e-146 523.5 319 79.3
Prupe.1G402500 Prunus persica HOM05D006118 ORTHO05D007750 1.5e-146 523.1 321 78.5
Gohir.A02G058900 Gossypium hirsutum HOM05D006118 ORTHO05D007750 2.6e-146 522.3 319 79.3
Lj5g0024511 Lotus japonicus HOM05D006118 ORTHO05D007750 2.6e-146 522.3 324 78.4
RcHm_v2.0_Chr6g0312021 Rosa chinensis HOM05D006118 ORTHO05D007750 2.6e-146 522.3 321 78.8
Cpa.g.sc146.16 Carica papaya HOM05D006118 ORTHO05D007750 3.4e-146 521.9 321 79.4
Atru.chr4.3167 Acer truncatum HOM05D006118 ORTHO05D007750 2.9e-145 518.8 326 79.8
FvH4_2g30820 Fragaria vesca HOM05D006118 ORTHO05D007750 2.9e-145 518.8 321 78.8
FAN20G1786 Fragaria x ananassa HOM05D006118 ORTHO05D007750 2.9e-145 518.8 321 78.8
Migut.E01785 Erythranthe guttata HOM05D006118 ORTHO05D007750 3.8e-145 518.5 329 77.5
Glyma.17G219300 Glycine max HOM05D006118 ORTHO05D007750 1.9e-144 516.2 323 78.0
FAN15G2451 Fragaria x ananassa HOM05D006118 ORTHO05D007750 3.2e-144 515.4 321 78.2
HanXRQChr09g0261891 Helianthus annuus HOM05D006118 ORTHO05D007750 3.2e-144 515.4 333 76.6
FAN27G1493 Fragaria x ananassa HOM05D006118 ORTHO05D007750 9.4e-144 513.8 321 78.2
arahy.Tifrunner.gnm1.ann1.ZI0SGT Arachis hypogaea HOM05D006118 ORTHO05D007750 1.2e-143 513.5 322 78.6
CANSAT25G1353 Cannabis sativa HOM05D006118 ORTHO05D007750 1.2e-143 513.5 325 78.8
Ca_13095_v3 Cicer arietinum L. HOM05D006118 ORTHO05D007750 1.2e-143 513.5 325 77.8
Eucgr.C00739 Eucalyptus grandis HOM05D006118 ORTHO05D007750 1.2e-143 513.5 320 78.4
Phvul.001G044800 Phaseolus vulgaris HOM05D006118 ORTHO05D007750 3.6e-143 511.9 323 77.4
MD15G1048100 Malus domestica HOM05D006118 ORTHO05D007750 6.1e-143 511.1 321 77.6
MELO3C016921.2 Cucumis melo HOM05D006118 ORTHO05D007750 8.8e-142 507.3 319 78.1
ClCG05G015850 Citrullus lanatus HOM05D006118 ORTHO05D007750 1.1e-141 506.9 324 76.9
CsaV3_4G036130 Cucumis sativus L. HOM05D006118 ORTHO05D007750 2.0e-141 506.1 319 77.7
PGSC0003DMG402012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 9.7e-141 503.8 327 77.1
arahy.Tifrunner.gnm1.ann1.Z643MN Arachis hypogaea HOM05D006118 ORTHO05D007750 1.3e-140 503.4 332 75.9
Hma1.2p1_0641F.1_g194200 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 1.7e-140 503.1 316 79.7
Manes.03G212200 Manihot esculenta HOM05D006118 ORTHO05D007750 1.7e-140 503.1 321 78.8
PSO063G1448 Papaver somniferum HOM05D006118 ORTHO05D007750 2.2e-140 502.7 326 77.0
Duzib151G0955 Durio zibethinus HOM05D006118 ORTHO05D007750 2.8e-140 502.3 297 81.5
Potri.008G206000 Populus trichocarpa HOM05D006118 ORTHO05D007750 2.8e-140 502.3 293 85.3
Sed0026686 Sechium edule HOM05D006118 ORTHO05D007750 3.7e-140 501.9 309 78.3
Lalb_Chr24g0393681 Lupinus albus HOM05D006118 ORTHO05D007750 6.3e-140 501.1 322 77.3
Cc08_g01010 Coffea canephora HOM05D006118 ORTHO05D007750 8.2e-140 500.7 334 75.4
SGA_v2.0_scaffold163G37995 Striga asiatica HOM05D006118 ORTHO05D007750 1.8e-139 499.6 342 75.1
Lsat_1_v5_gn_8_70541 Lactuca sativa HOM05D006118 ORTHO05D007750 2.4e-139 499.2 333 75.1
PSO421G0086 Papaver somniferum HOM05D006118 ORTHO05D007750 3.1e-139 498.8 326 77.0
MSTRG.14088 Avicennia marina HOM05D006118 ORTHO05D007750 7.0e-139 497.7 326 75.8
Solyc08g061260.4 Solanum lycopersicum HOM05D006118 ORTHO05D007750 7.0e-139 497.7 328 76.5
Sopen08g016640 Solanum pennellii HOM05D006118 ORTHO05D007750 7.0e-139 497.7 328 76.5
Carub.0001s3740 Capsella rubella HOM05D006118 ORTHO05D007750 1.6e-138 496.5 328 76.8
DCAR_003726 Daucus carota HOM05D006118 ORTHO05D007750 2.6e-138 495.7 337 73.3
AT1G48270 Arabidopsis thaliana HOM05D006118 ORTHO05D007750 4.5e-138 495.0 328 76.5
AL1G54870 Arabidopsis lyrata HOM05D006118 ORTHO05D007750 2.2e-137 492.7 328 75.9
Sp1g35230 Schrenkiella parvula HOM05D006118 ORTHO05D007750 8.5e-137 490.7 330 75.2
Aqoxy7G01030 Aquilegia oxysepala HOM05D006118 ORTHO05D007750 1.1e-136 490.3 324 75.3
CARHR037890 Cardamine hirsuta HOM05D006118 ORTHO05D007750 2.5e-136 489.2 334 74.9
VMungo0647G1968 Vigna mungo HOM05D006118 ORTHO05D007750 2.5e-136 489.2 287 82.2
PGR142G4277 Punica granatum HOM05D006118 ORTHO05D007750 4.2e-136 488.4 324 75.3
Thhalv10011644m.g Eutrema salsugineum HOM05D006118 ORTHO05D007750 9.4e-136 487.3 335 74.0
BolC6t35406H Brassica oleracea HOM05D006118 ORTHO05D007750 1.6e-135 486.5 329 75.1
Glyma.14G107200 Glycine max HOM05D006118 ORTHO05D007750 2.1e-135 486.1 291 80.8
BcaB07g33772 Brassica carinata HOM05D006118 ORTHO05D007750 6.1e-135 484.6 330 74.5
Rhsim13G0216900 Rhododendron simsii HOM05D006118 ORTHO05D007750 1.8e-134 483.0 331 74.0
BcaC08g43024 Brassica carinata HOM05D006118 ORTHO05D007750 2.3e-134 482.6 330 74.2
A06p04570 Brassica napus HOM05D006118 ORTHO05D007750 2.3e-134 482.6 331 74.3
C06p02770 Brassica napus HOM05D006118 ORTHO05D007750 2.3e-134 482.6 330 74.2
BraA06t23661Z Brassica rapa HOM05D006118 ORTHO05D007750 2.3e-134 482.6 331 74.3
CSS0045297 Camellia sinensis var. sinensis HOM05D006118 ORTHO05D007750 2.0e-133 479.6 284 82.7
vmacro04115 Vaccinium macrocarpon HOM05D006118 ORTHO05D007750 2.5e-128 462.6 395 62.8
Medtr1g015010 Medicago truncatula HOM05D006118 ORTHO05D007750 5.5e-128 461.5 325 72.9
Nitab4.5_0001576g0100 Nicotiana tabacum HOM05D006118 ORTHO05D007750 5.7e-125 451.4 326 71.5
Sc06g0000090 Simmondsia chinensis HOM05D006118 ORTHO05D007750 5.7e-125 451.4 320 70.6
THA.LOC104824720 Tarenaya hassleriana HOM05D006118 ORTHO05D007750 2.2e-124 449.5 325 72.0
Dinv41849 Davidia involucrata HOM05D006118 ORTHO05D007750 4.8e-124 448.4 270 81.1
SalBow1G5335 Salvia bowleyana HOM05D006118 ORTHO05D007750 3.1e-123 445.7 427 57.8
TWI53G1421 Tripterygium wilfordii HOM05D006118 ORTHO05D007750 5.9e-122 441.4 322 72.0
ECA236G0212 Erigeron canadensis HOM05D006118 ORTHO05D007750 1.1e-120 437.2 272 78.3
Actinidia01325 Actinidia chinensis HOM05D006118 ORTHO05D007750 1.9e-120 436.4 268 80.2
Psat6g023080 Pisum sativum HOM05D006118 ORTHO05D007750 7.2e-120 434.5 282 78.0
Oeu036787.2 Olea europaea HOM05D006118 ORTHO05D007750 2.8e-119 432.6 283 76.0
Hma1.2p1_0641F.1_g194210 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 3.4e-117 425.6 259 79.9
Os06g0199800 Oryza sativa ssp. japonica HOM05D006118 ORTHO05D007750 1.7e-116 423.3 316 66.8
FAN24G3410 Fragaria x ananassa HOM05D006118 ORTHO05D007750 2.8e-116 422.5 263 76.8
Aa31LG10G5490 Aethionema arabicum HOM05D006118 ORTHO05D007750 1.1e-115 420.6 332 67.2
CDE06G0461 Ceratophyllum demersum HOM05D006118 ORTHO05D007750 1.2e-114 417.2 285 72.3
TPR.G38901 Trifolium pratense HOM05D006118 ORTHO05D007750 4.5e-114 415.2 257 78.2
COL.COLO4_34509 Corchorus olitorius HOM05D006118 ORTHO05D007750 7.8e-114 414.5 345 64.3
AUR62020280 Chenopodium quinoa HOM05D006118 ORTHO05D007750 2.1e-111 406.4 304 69.4
AagrBONN_evm.TU.Sc2ySwM_228.1339 Anthoceros agrestis HOM05D006118 ORTHO05D007750 3.0e-110 402.5 317 62.8
Peaxi162Scf00486g00116 Petunia axillaris HOM05D006118 ORTHO05D007750 1.5e-109 400.2 324 64.2
Oeu024208.1 Olea europaea HOM05D006118 ORTHO05D007750 1.6e-106 390.2 255 76.5
Mapoly0073s0070 Marchantia polymorpha HOM05D006118 ORTHO05D007750 9.5e-104 380.9 297 63.3
Ah.12g061330 Amaranthus hybridus HOM05D006118 ORTHO05D007750 2.1e-103 379.8 316 63.0
EL10Ac2g02406 Beta vulgaris HOM05D006118 ORTHO05D007750 1.3e-100 370.5 323 61.9
Pp3c15_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 6.0e-98 361.7 320 55.9
Pp3c9_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 1.5e-96 357.1 301 58.1
Haze_18321 Corylus avellana HOM05D006118 ORTHO05D007750 3.3e-96 355.9 652 38.0
Hund25545 Selenicereus undatus HOM05D006118 ORTHO05D007750 1.6e-95 353.6 283 66.8
SMO119G0499 Selaginella moellendorffii HOM05D006118 ORTHO05D007750 1.5e-93 347.1 264 64.0
AUR62037725 Chenopodium quinoa HOM05D006118 ORTHO05D007750 3.5e-90 335.9 272 64.7
ATR0598G044 Amborella trichopoda HOM05D006118 ORTHO05D007750 8.1e-87 324.7 208 76.4
HPP92_016236 Vanilla planifolia HOM05D006118 ORTHO05D007750 3.5e-82 309.3 323 53.9
arahy.Tifrunner.gnm1.ann1.C1NZN8 Arachis hypogaea HOM05D006118 ORTHO05D007750 1.9e-80 303.5 329 54.7
Lj7A209G43 Lonicera japonica HOM05D006118 ORTHO05D007750 7.6e-77 291.6 235 67.2
Zm00001eb278600 Zea mays HOM05D006118 ORTHO05D007750 2.1e-74 283.5 188 68.6
BcaB01g03835 Brassica carinata HOM05D006118 ORTHO05D007750 1.1e-72 277.7 193 73.6
CBR_g36835 Chara braunii HOM05D006118 ORTHO05D007750 2.9e-68 263.1 205 61.5
PGSC0003DMG401012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 4.6e-66 255.8 159 79.2
BcaB08g36375 Brassica carinata HOM05D006118 ORTHO05D007750 3.9e-65 252.7 193 69.9
Nitab4.5_0009849g0030 Nicotiana tabacum HOM05D006118 ORTHO05D007750 7.4e-64 248.4 324 47.5
arahy.Tifrunner.gnm1.ann1.K6H74S Arachis hypogaea HOM05D006118 ORTHO05D007750 2.6e-61 240.0 172 68.0
unitig_8.g4842 Utricularia gibba HOM05D006118 ORTHO05D007750 8.7e-57 224.9 167 65.9
MD15G1048300 Malus domestica HOM05D006118 ORTHO05D007750 1.5e-56 224.2 234 53.4
BcaB07g32513 Brassica carinata HOM05D006118 ORTHO05D007750 6.5e-52 208.8 175 60.0
BcaB01g01553 Brassica carinata HOM05D006118 ORTHO05D007750 3.5e-50 203.0 145 69.7
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 1.2e-45 188.0 130 71.5
Lalb_Chr23g0268011 Lupinus albus HOM05D006118 ORTHO05D007750 6.1e-42 175.6 101 81.2
Lj7A209G42 Lonicera japonica HOM05D006118 ORTHO05D007750 2.8e-39 166.8 90 85.6
PRCOL_00004868 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 3.1e-30 136.7 272 34.9
ATR0684G160 Amborella trichopoda HOM05D006118 ORTHO05D007750 9.1e-30 135.2 92 69.6
SEGI_23264 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 3.2e-27 126.7 80 76.2
PRCOL_00005697 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 3.0e-25 120.2 256 29.7
MCO03G156 Micromonas commoda HOM05D006118 ORTHO05D007750 8.0e-18 95.5 379 25.9
Lalb_Chr23g0268021 Lupinus albus HOM05D006118 ORTHO05D007750 3.5e-13 80.1 46 80.4
BcaB01g01552 Brassica carinata HOM05D006118 ORTHO05D007750 1.0e-09 68.6 54 72.2
SEGI_18851 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 8.8e-09 65.5 68 48.5
MD15G1048200 Malus domestica HOM05D006118 ORTHO05D007750 1.3e-07 61.6 57 57.9


User provided reference genes

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