Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra08G0148500 Salix brachista HOM05D007369 ORTHO05D009369 3.4e-136 488.4 261 100.0
Potri.008G195300 Populus trichocarpa HOM05D007369 ORTHO05D009369 6.9e-81 304.7 171 91.8
Potri.010G031250 Populus trichocarpa HOM05D007369 ORTHO05D009369 5.5e-70 268.5 171 81.9
Manes.03G190800 Manihot esculenta HOM05D007369 ORTHO05D009369 6.1e-61 238.4 171 74.3
Cfa015498 Carpinus fangiana HOM05D007369 ORTHO05D009369 5.3e-57 225.3 171 68.4
QL06p007318 Quercus lobata HOM05D007369 ORTHO05D009369 7.7e-56 221.5 172 68.0
Prupe.1G142600 Prunus persica HOM05D007369 ORTHO05D009369 3.8e-55 219.2 191 60.2
Dinv38329 Davidia involucrata HOM05D007369 ORTHO05D009369 5.0e-55 218.8 175 66.3
Duzib052G0382 Durio zibethinus HOM05D007369 ORTHO05D009369 1.1e-54 217.6 191 61.3
Thecc.04G277200 Theobroma cacao HOM05D007369 ORTHO05D009369 1.9e-54 216.9 192 60.9
MD13G1174200 Malus domestica HOM05D007369 ORTHO05D009369 3.2e-54 216.1 159 69.2
Gohir.D09G060700 Gossypium hirsutum HOM05D007369 ORTHO05D009369 9.4e-54 214.5 172 67.4
Gohir.A09G061800 Gossypium hirsutum HOM05D007369 ORTHO05D009369 4.7e-53 212.2 177 65.0
Manes.15G017400 Manihot esculenta HOM05D007369 ORTHO05D009369 1.4e-52 210.7 171 65.5
CiPaw.02G086900 Carya illinoinensis HOM05D007369 ORTHO05D009369 6.8e-52 208.4 164 65.2
Gorai.006G075300 Gossypium raimondii HOM05D007369 ORTHO05D009369 1.3e-50 204.1 172 65.7
GSVIVG01017812001 Vitis vinifera HOM05D007369 ORTHO05D009369 1.7e-50 203.8 159 68.6
Hma1.2p1_0078F.1_g040800 Hydrangea macrophylla HOM05D007369 ORTHO05D009369 1.8e-49 200.3 171 60.8
TAR636G2558 Trochodendron aralioides HOM05D007369 ORTHO05D009369 7.0e-49 198.4 171 61.4
RcHm_v2.0_Chr4g0420931 Rosa chinensis HOM05D007369 ORTHO05D009369 1.2e-48 197.6 189 57.1
Rhsim04G0215900 Rhododendron simsii HOM05D007369 ORTHO05D009369 2.0e-48 196.8 174 62.1
CSS0015973 Camellia sinensis var. sinensis HOM05D007369 ORTHO05D009369 7.7e-48 194.9 171 61.4
Nn3g21294 Nelumbo nucifera HOM05D007369 ORTHO05D009369 3.8e-47 192.6 179 58.1
CANSAT78G0356 Cannabis sativa HOM05D007369 ORTHO05D009369 9.4e-46 188.0 179 54.7
Nn4g26033 Nelumbo nucifera HOM05D007369 ORTHO05D009369 2.7e-45 186.4 159 62.3
Oeu044796.2 Olea europaea HOM05D007369 ORTHO05D009369 3.6e-45 186.0 172 54.7
FAN17G0929 Fragaria x ananassa HOM05D007369 ORTHO05D009369 6.1e-45 185.3 192 55.7
TWI73G1273 Tripterygium wilfordii HOM05D007369 ORTHO05D009369 8.0e-45 184.9 157 61.8
FvH4_4g17160 Fragaria vesca HOM05D007369 ORTHO05D009369 4.0e-44 182.6 159 63.5
FAN12G1425 Fragaria x ananassa HOM05D007369 ORTHO05D009369 4.0e-44 182.6 159 63.5
FAN07G2486 Fragaria x ananassa HOM05D007369 ORTHO05D009369 5.2e-44 182.2 160 63.1
Glyma.13G214800 Glycine max HOM05D007369 ORTHO05D009369 1.5e-43 180.6 162 58.6
FAN12G3176 Fragaria x ananassa HOM05D007369 ORTHO05D009369 5.7e-43 178.7 159 62.9
Ciclev10005057m.g Citrus clementina HOM05D007369 ORTHO05D009369 2.2e-42 176.8 193 54.9
VMungo0540G1702 Vigna mungo HOM05D007369 ORTHO05D009369 2.8e-42 176.4 163 56.4
Nitab4.5_0003067g0040 Nicotiana tabacum HOM05D007369 ORTHO05D009369 1.8e-41 173.7 147 59.2
Migut.G00214 Erythranthe guttata HOM05D007369 ORTHO05D009369 4.1e-41 172.6 153 56.9
ATR0706G035 Amborella trichopoda HOM05D007369 ORTHO05D009369 5.4e-41 172.2 167 54.5
CAN.G223.8 Capsicum annuum HOM05D007369 ORTHO05D009369 3.5e-40 169.5 178 50.6
Oeu062882.1 Olea europaea HOM05D007369 ORTHO05D009369 5.9e-40 168.7 144 60.4
Haze_01056 Corylus avellana HOM05D007369 ORTHO05D009369 7.7e-40 168.3 225 47.6
CsaV3_3G014100 Cucumis sativus L. HOM05D007369 ORTHO05D009369 1.0e-39 167.9 163 55.2
Medtr8g093650 Medicago truncatula HOM05D007369 ORTHO05D009369 3.8e-39 166.0 162 54.3
Phvul.006G161000 Phaseolus vulgaris HOM05D007369 ORTHO05D009369 5.0e-39 165.6 162 54.9
Sed0026345 Sechium edule HOM05D007369 ORTHO05D009369 5.0e-39 165.6 159 56.0
Actinidia40222 Actinidia chinensis HOM05D007369 ORTHO05D009369 1.9e-38 163.7 144 60.4
Aqoxy2G03087 Aquilegia oxysepala HOM05D007369 ORTHO05D009369 1.9e-38 163.7 153 56.9
Solyc01g067700.3 Solanum lycopersicum HOM05D007369 ORTHO05D009369 4.3e-38 162.5 180 47.8
COL.COLO4_13933 Corchorus olitorius HOM05D007369 ORTHO05D009369 5.6e-38 162.2 254 42.1
Glyma.15G098300 Glycine max HOM05D007369 ORTHO05D009369 9.5e-38 161.4 136 61.0
SalBow2G2600 Salvia bowleyana HOM05D007369 ORTHO05D009369 2.1e-37 160.2 157 53.5
FAN17G3125 Fragaria x ananassa HOM05D007369 ORTHO05D009369 6.1e-37 158.7 127 65.4
Sopen01g029630 Solanum pennellii HOM05D007369 ORTHO05D009369 6.1e-37 158.7 180 47.2
Lalb_Chr18g0055751 Lupinus albus HOM05D007369 ORTHO05D009369 1.8e-36 157.1 194 46.9
SGA_v2.0_scaffold57G20253 Striga asiatica HOM05D007369 ORTHO05D009369 2.3e-36 156.8 180 48.3
Cc03_g02400 Coffea canephora HOM05D007369 ORTHO05D009369 4.0e-36 156.0 158 55.1
Eucgr.B01264 Eucalyptus grandis HOM05D007369 ORTHO05D009369 4.0e-36 156.0 164 50.0
ClCG05G005770 Citrullus lanatus HOM05D007369 ORTHO05D009369 5.2e-36 155.6 156 54.5
Actinidia23432 Actinidia chinensis HOM05D007369 ORTHO05D009369 8.9e-36 154.8 162 54.9
THA.LOC104820236 Tarenaya hassleriana HOM05D007369 ORTHO05D009369 8.9e-36 154.8 162 50.6
TPR.G37368 Trifolium pratense HOM05D007369 ORTHO05D009369 4.4e-35 152.5 152 55.3
MBI19_g37517_MAGBIO Magnolia biondii HOM05D007369 ORTHO05D009369 2.9e-34 149.8 144 54.9
Duzib151G0340 Durio zibethinus HOM05D007369 ORTHO05D009369 7.0e-33 145.2 191 45.5
DCAR_002440 Daucus carota HOM05D007369 ORTHO05D009369 5.9e-32 142.1 162 51.9
Peaxi162Scf00386g00219 Petunia axillaris HOM05D007369 ORTHO05D009369 7.8e-32 141.7 119 59.7
Ca_00577_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 1.0e-31 141.4 162 49.4
MELO3C031713.2 Cucumis melo HOM05D007369 ORTHO05D009369 2.3e-31 140.2 180 47.2
MD16G1175700 Malus domestica HOM05D007369 ORTHO05D009369 3.0e-31 139.8 94 72.3
arahy.Tifrunner.gnm1.ann1.IR05CW Arachis hypogaea HOM05D007369 ORTHO05D009369 3.9e-31 139.4 148 51.4
Psat1g187040 Pisum sativum HOM05D007369 ORTHO05D009369 5.0e-31 139.0 162 49.4
vmacro08206 Vaccinium macrocarpon HOM05D007369 ORTHO05D009369 5.0e-31 139.0 142 57.7
arahy.Tifrunner.gnm1.ann1.ED76E0 Arachis hypogaea HOM05D007369 ORTHO05D009369 1.9e-30 137.1 143 53.1
Atru.chr4.2749 Acer truncatum HOM05D007369 ORTHO05D009369 5.6e-30 135.6 108 63.9
Mapoly0126s0031 Marchantia polymorpha HOM05D007369 ORTHO05D009369 2.8e-29 133.3 188 43.6
Sc13g0003630 Simmondsia chinensis HOM05D007369 ORTHO05D009369 1.8e-28 130.6 146 50.7
HanXRQChr03g0080111 Helianthus annuus HOM05D007369 ORTHO05D009369 1.2e-27 127.9 157 47.1
ECA240G2128 Erigeron canadensis HOM05D007369 ORTHO05D009369 1.7e-26 124.0 187 43.3
FAN22G0049 Fragaria x ananassa HOM05D007369 ORTHO05D009369 2.4e-25 120.2 159 48.4
Nitab4.5_0000197g0120 Nicotiana tabacum HOM05D007369 ORTHO05D009369 5.4e-25 119.0 123 50.4
Ca_17638_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 9.2e-25 118.2 126 52.4
Dinv44429 Davidia involucrata HOM05D007369 ORTHO05D009369 1.0e-23 114.8 120 55.8
Zm00001eb410560 Zea mays HOM05D007369 ORTHO05D009369 4.9e-18 95.9 157 36.9
AagrBONN_evm.TU.Sc2ySwM_362.2687 Anthoceros agrestis HOM05D007369 ORTHO05D009369 3.2e-17 93.2 98 50.0
MD16G1175600 Malus domestica HOM05D007369 ORTHO05D009369 6.6e-15 85.5 69 65.2
LjContig00389g0017607 Lotus japonicus HOM05D007369 ORTHO05D009369 4.7e-13 79.3 95 46.3
Lsat_1_v5_gn_5_50560 Lactuca sativa HOM05D007369 ORTHO05D009369 1.1e-12 78.2 108 45.4
Hund24911 Selenicereus undatus HOM05D007369 ORTHO05D009369 5.8e-11 72.4 182 33.0
Lalb_Chr20g0118171 Lupinus albus HOM05D007369 ORTHO05D009369 4.1e-09 66.2 56 57.1
Mapoly0008s0171 Marchantia polymorpha HOM05D007369 ORTHO05D009369 7.1e-09 65.5 52 57.7
Lalb_Chr20g0118161 Lupinus albus HOM05D007369 ORTHO05D009369 2.5e-06 57.0 78 42.3


User provided reference genes

Program Settings