Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra08G0140000 Salix brachista HOM05D007686 ORTHO05D009709 6.5e-107 392.1 257 100.0
Potri.008G185000 Populus trichocarpa HOM05D007686 ORTHO05D009709 5.1e-96 355.9 257 93.0
Manes.13G021400 Manihot esculenta HOM05D007686 ORTHO05D009709 1.1e-61 241.9 257 70.8
Gohir.D04G180200 Gossypium hirsutum HOM05D007686 ORTHO05D009709 2.7e-60 237.3 257 70.8
Manes.13G022000 Manihot esculenta HOM05D007686 ORTHO05D009709 1.7e-59 234.6 257 68.9
Gohir.A04G137000 Gossypium hirsutum HOM05D007686 ORTHO05D009709 5.6e-50 203.0 257 66.1
arahy.Tifrunner.gnm1.ann1.BXJH78 Arachis hypogaea HOM05D007686 ORTHO05D009709 1.2e-44 185.3 138 64.5
TWI36G0128 Tripterygium wilfordii HOM05D007686 ORTHO05D009709 8.6e-43 179.1 257 60.3
Gohir.A03G132900 Gossypium hirsutum HOM05D007686 ORTHO05D009709 9.5e-42 175.6 223 45.7
Medtr8g089700 Medicago truncatula HOM05D007686 ORTHO05D009709 4.7e-41 173.3 137 61.3
Lj4g0016926 Lotus japonicus HOM05D007686 ORTHO05D009709 1.1e-40 172.2 137 65.7
Glyma.08G131100 Glycine max HOM05D007686 ORTHO05D009709 1.2e-39 168.7 145 61.4
Glyma.05G173932 Glycine max HOM05D007686 ORTHO05D009709 1.5e-39 168.3 145 60.7
Phvul.002G258900 Phaseolus vulgaris HOM05D007686 ORTHO05D009709 2.9e-38 164.1 143 60.1
TPR.G6255 Trifolium pratense HOM05D007686 ORTHO05D009709 4.9e-38 163.3 122 65.6
Psat7g058760 Pisum sativum HOM05D007686 ORTHO05D009709 1.6e-36 158.3 121 64.5
Dinv14741 Davidia involucrata HOM05D007686 ORTHO05D009709 3.9e-35 153.7 108 67.6
Ca_17785_v3 Cicer arietinum L. HOM05D007686 ORTHO05D009709 6.6e-35 152.9 122 62.3
Lalb_Chr07g0185471 Lupinus albus HOM05D007686 ORTHO05D009709 1.5e-34 151.8 116 64.7
Gorai.005G176400 Gossypium raimondii HOM05D007686 ORTHO05D009709 1.5e-31 141.7 230 62.6
Lsat_1_v5_gn_8_152860 Lactuca sativa HOM05D007686 ORTHO05D009709 9.3e-29 132.5 223 60.1
TWI18G1075 Tripterygium wilfordii HOM05D007686 ORTHO05D009709 9.3e-29 132.5 248 55.6
Os07g0688100 Oryza sativa ssp. japonica HOM05D007686 ORTHO05D009709 1.3e-27 128.6 120 47.5
Eucgr.H02473 Eucalyptus grandis HOM05D007686 ORTHO05D009709 1.7e-27 128.3 257 54.1
Thecc.02G263700 Theobroma cacao HOM05D007686 ORTHO05D009709 2.3e-27 127.9 257 53.7
CANSAT01G2773 Cannabis sativa HOM05D007686 ORTHO05D009709 2.1e-25 121.3 78 73.1
RcHm_v2.0_Chr4g0432731 Rosa chinensis HOM05D007686 ORTHO05D009709 6.2e-25 119.8 80 68.8
Prupe.1G242700 Prunus persica HOM05D007686 ORTHO05D009709 4.0e-24 117.1 77 71.4
FAN12G1967 Fragaria x ananassa HOM05D007686 ORTHO05D009709 1.2e-23 115.5 76 69.7
HanXRQChr08g0208401 Helianthus annuus HOM05D007686 ORTHO05D009709 2.6e-23 114.4 257 51.4
CiPaw.05G168000 Carya illinoinensis HOM05D007686 ORTHO05D009709 4.5e-23 113.6 81 65.4
PGR119G1810 Punica granatum HOM05D007686 ORTHO05D009709 4.5e-23 113.6 253 50.2
Ciclev10031251m.g Citrus clementina HOM05D007686 ORTHO05D009709 7.6e-23 112.8 80 70.0
SGA_v2.0_scaffold100G29576 Striga asiatica HOM05D007686 ORTHO05D009709 8.4e-22 109.4 81 59.3
MD13G1103100 Malus domestica HOM05D007686 ORTHO05D009709 2.4e-21 107.8 67 73.1
Cpa.g.sc33.48 Carica papaya HOM05D007686 ORTHO05D009709 5.4e-21 106.7 83 62.7
Migut.K00622 Erythranthe guttata HOM05D007686 ORTHO05D009709 5.4e-21 106.7 80 61.2
ECA233G6157 Erigeron canadensis HOM05D007686 ORTHO05D009709 1.0e-19 102.4 253 50.2
Gorai.012G173300 Gossypium raimondii HOM05D007686 ORTHO05D009709 1.8e-19 101.7 257 50.2
CSS0050065 Camellia sinensis var. sinensis HOM05D007686 ORTHO05D009709 1.1e-18 99.0 62 72.6
Solyc06g008190.1 Solanum lycopersicum HOM05D007686 ORTHO05D009709 1.5e-18 98.6 68 69.1
Sopen06g003050 Solanum pennellii HOM05D007686 ORTHO05D009709 1.5e-18 98.6 68 69.1
Oeu056704.1 Olea europaea HOM05D007686 ORTHO05D009709 3.3e-18 97.4 77 63.6
MD16G1103300 Malus domestica HOM05D007686 ORTHO05D009709 5.6e-18 96.7 59 74.6
CsaV3_5G030960 Cucumis sativus L. HOM05D007686 ORTHO05D009709 1.3e-17 95.5 78 59.0
SHI17831 Sapria himalayana HOM05D007686 ORTHO05D009709 1.3e-17 95.5 258 47.3
CDE05G1633 Ceratophyllum demersum HOM05D000570 ORTHO05D001174 2.1e-17 94.7 75 60.0
COL.COLO4_23488 Corchorus olitorius HOM05D007686 ORTHO05D009709 2.1e-17 94.7 223 53.8
MSTRG.555 Avicennia marina HOM05D007686 ORTHO05D009709 1.4e-16 92.0 66 65.2
Sed0013465 Sechium edule HOM05D007686 ORTHO05D009709 1.8e-16 91.7 77 58.4
ClCG05G025900 Citrullus lanatus HOM05D007686 ORTHO05D009709 3.1e-16 90.9 75 57.3
DCAR_031167 Daucus carota HOM05D002540 ORTHO05D002672 3.1e-16 90.9 69 59.4
MBI17_g12881_MAGBIO Magnolia biondii HOM05D007686 ORTHO05D009709 3.1e-16 90.9 71 62.0
GSVIVG01000559001 Vitis vinifera HOM05D007686 ORTHO05D009709 3.1e-16 90.9 59 72.9
Lj3P1060G37 Lonicera japonica HOM05D007686 ORTHO05D009709 4.0e-16 90.5 66 62.1
Rhsim12G0039200 Rhododendron simsii HOM05D007686 ORTHO05D009709 6.9e-16 89.7 58 72.4
Nitab4.5_0000067g0230 Nicotiana tabacum HOM05D007686 ORTHO05D009709 2.6e-15 87.8 63 63.5
AUR62011787 Chenopodium quinoa HOM05D007686 ORTHO05D009709 5.8e-15 86.7 61 65.6
Nitab4.5_0001839g0010 Nicotiana tabacum HOM05D007686 ORTHO05D009709 7.6e-15 86.3 60 66.7
Hma1.2p1_0815F.1_g222720 Hydrangea macrophylla HOM05D007686 ORTHO05D009709 2.9e-14 84.3 59 66.1
Oeu049173.1 Olea europaea HOM05D007686 ORTHO05D009709 2.9e-14 84.3 112 42.9
Gohir.D02G157000 Gossypium hirsutum HOM05D007686 ORTHO05D009709 3.8e-14 84.0 60 68.3
Zm00001eb331140 Zea mays HOM05D007686 ORTHO05D009709 8.4e-14 82.8 79 48.1
QL03p056833 Quercus lobata HOM05D007686 ORTHO05D009709 1.1e-13 82.4 54 70.4
QL93p1848_0021 Quercus lobata HOM05D007686 ORTHO05D009709 1.1e-13 82.4 54 70.4
EL10Ac7g16785 Beta vulgaris HOM05D007686 ORTHO05D009709 2.7e-12 77.8 57 64.9
Aa31LG1G1760 Aethionema arabicum HOM05D007686 ORTHO05D009709 4.6e-12 77.0 256 46.9
Atru.chr11.2166 Acer truncatum HOM05D007686 ORTHO05D009709 7.9e-12 76.3 53 69.8
BolC5t29774H Brassica oleracea HOM05D007686 ORTHO05D009709 3.0e-11 74.3 256 45.7
BcaC05g25091 Brassica carinata HOM05D007686 ORTHO05D009709 3.9e-11 73.9 58 60.3
Ah.10g031010 Amaranthus hybridus HOM05D007686 ORTHO05D009709 5.1e-11 73.6 54 64.8
AT1G13040 Arabidopsis thaliana HOM05D007686 ORTHO05D009709 5.1e-11 73.6 256 45.7
PSO724G0460 Papaver somniferum HOM05D007686 ORTHO05D009709 5.1e-11 73.6 55 61.8
C05p10280 Brassica napus HOM05D002540 ORTHO05D002672 6.7e-11 73.2 256 45.3
Aqoxy2G03020 Aquilegia oxysepala HOM05D007686 ORTHO05D009709 8.7e-11 72.8 49 67.3
FvH4_4g25420 Fragaria vesca HOM05D007686 ORTHO05D009709 8.7e-11 72.8 44 72.7
THA.LOC104805275 Tarenaya hassleriana HOM05D007686 ORTHO05D009709 1.5e-10 72.0 256 45.3
A06p08670 Brassica napus HOM05D002540 ORTHO05D002672 1.9e-10 71.6 256 45.3
BraA06t24064Z Brassica rapa HOM05D007686 ORTHO05D009709 1.9e-10 71.6 256 45.3
C08p15790 Brassica napus HOM05D002540 ORTHO05D002672 2.5e-10 71.2 56 60.7
BolC8t49205H Brassica oleracea HOM05D002540 ORTHO05D002672 2.5e-10 71.2 56 60.7
PSO135G0590 Papaver somniferum HOM05D007686 ORTHO05D009709 2.5e-10 71.2 53 62.3
AL1G24690 Arabidopsis lyrata HOM05D007686 ORTHO05D009709 5.6e-10 70.1 255 45.5
TAR383G0079 Trochodendron aralioides HOM05D007686 ORTHO05D009709 9.6e-10 69.3 47 68.1
PGSC0003DMG400014696 Solanum tuberosum HOM05D007686 ORTHO05D009709 2.8e-09 67.8 47 68.1
Carub.0001s1279 Capsella rubella HOM05D007686 ORTHO05D009709 3.7e-09 67.4 53 64.2
CARHR013370 Cardamine hirsuta HOM05D007686 ORTHO05D009709 4.8e-09 67.0 55 58.2
Sc06g0009620 Simmondsia chinensis HOM05D007686 ORTHO05D009709 4.8e-09 67.0 51 60.8
Peaxi162Scf00207g01213 Petunia axillaris HOM05D007686 ORTHO05D009709 6.2e-09 66.6 51 56.9
A08p32500 Brassica napus HOM05D007686 ORTHO05D009709 8.2e-09 66.2 47 66.0
BraA08t35174Z Brassica rapa HOM05D007686 ORTHO05D009709 8.2e-09 66.2 47 66.0
Carub.0002s0151 Capsella rubella HOM05D000162 ORTHO05D000090 1.4e-08 65.5 133 28.6
Sp1g11590 Schrenkiella parvula HOM05D007686 ORTHO05D009709 1.4e-08 65.5 256 44.5
Thhalv10007381m.g Eutrema salsugineum HOM05D007686 ORTHO05D009709 6.9e-08 63.2 40 72.5
PGR142G0989 Punica granatum HOM05D000855 ORTHO05D008530 1.2e-07 62.4 256 21.5
ATR0564G099 Amborella trichopoda HOM05D002453 ORTHO05D002107 2.6e-07 61.2 133 28.6
HPP92_012781 Vanilla planifolia HOM05D007686 ORTHO05D009709 2.6e-07 61.2 41 61.0
Sabra16G0092100 Salix brachista HOM05D000855 ORTHO05D008530 3.4e-07 60.8 251 20.7
Cc04_g16730 Coffea canephora HOM05D002453 ORTHO05D002107 5.8e-07 60.1 133 25.6
Lj5g0021887 Lotus japonicus HOM05D000855 ORTHO05D008530 5.8e-07 60.1 259 19.7
PSO832G3824 Papaver somniferum HOM05D007155 ORTHO05D003034 5.8e-07 60.1 119 27.7
Ah.08g211930 Amaranthus hybridus HOM05D000855 ORTHO05D008530 7.6e-07 59.7 251 20.7
Potri.016G085300 Populus trichocarpa HOM05D000855 ORTHO05D008530 2.2e-06 58.2 251 20.3
Hma1.2p1_0111F.1_g053850 Hydrangea macrophylla HOM05D000855 ORTHO05D008530 2.9e-06 57.8 251 19.9
Hma1.2p1_0111F.1_g053860 Hydrangea macrophylla HOM05D000855 ORTHO05D008530 2.9e-06 57.8 251 19.9
PSO210G6432 Papaver somniferum HOM05D007155 ORTHO05D003034 2.9e-06 57.8 119 26.9
Aqoxy4G03187 Aquilegia oxysepala HOM05D000855 ORTHO05D008530 3.8e-06 57.4 251 19.5
Glyma.10G049200 Glycine max HOM05D000855 ORTHO05D008530 4.9e-06 57.0 250 20.4
MBI12_g09300_MAGBIO Magnolia biondii HOM05D000855 ORTHO05D008530 4.9e-06 57.0 251 21.1
CAN.G941.2 Capsicum annuum HOM05D007686 ORTHO05D009709 6.5e-06 56.6 165 26.7
Ca_11448_v3 Cicer arietinum L. HOM05D000855 ORTHO05D008530 6.5e-06 56.6 251 20.3
Thecc.10G186400 Theobroma cacao HOM05D007552 ORTHO05D009397 6.5e-06 56.6 144 27.8
Lalb_Chr02g0153641 Lupinus albus HOM05D000855 ORTHO05D008530 8.4e-06 56.2 251 27.1
PSO339G3775 Papaver somniferum HOM05D000855 ORTHO05D008530 8.4e-06 56.2 251 20.7


User provided reference genes

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