Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra08G0138500 Salix brachista HOM05D007119 ORTHO05D009220 0.0e+00 1151.0 570 100.0
Potri.008G181500 Populus trichocarpa HOM05D007119 ORTHO05D009220 3.7e-236 821.6 570 76.0
Manes.13G018700 Manihot esculenta HOM05D007119 ORTHO05D009220 2.7e-202 709.1 560 65.5
QL03p055873 Quercus lobata HOM05D007119 ORTHO05D009220 1.1e-195 687.2 560 63.0
Dinv14769 Davidia involucrata HOM05D007119 ORTHO05D009220 2.0e-194 682.9 558 63.4
CiPaw.05G175700 Carya illinoinensis HOM05D007119 ORTHO05D009220 1.3e-193 680.2 560 63.4
COL.COLO4_23551 Corchorus olitorius HOM05D007119 ORTHO05D009220 4.7e-191 671.8 556 62.1
Thecc.02G269100 Theobroma cacao HOM05D007119 ORTHO05D009220 6.2e-191 671.4 558 62.4
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 1.1e-187 660.6 620 57.4
TAR629G0375 Trochodendron aralioides HOM05D007119 ORTHO05D009220 6.0e-186 654.8 557 61.0
Ciclev10031444m.g Citrus clementina HOM05D007119 ORTHO05D009220 1.0e-185 654.1 557 61.2
GSVIVG01010292001 Vitis vinifera HOM05D007119 ORTHO05D009220 1.3e-185 653.7 560 61.1
CSS0010905 Camellia sinensis var. sinensis HOM05D007119 ORTHO05D009220 5.0e-185 651.7 560 60.7
Atru.chr11.2204 Acer truncatum HOM05D007119 ORTHO05D009220 3.3e-184 649.0 558 61.1
Eucgr.H04699 Eucalyptus grandis HOM05D007119 ORTHO05D009220 3.3e-184 649.0 547 60.5
RcHm_v2.0_Chr4g0432041 Rosa chinensis HOM05D007119 ORTHO05D009220 9.5e-184 647.5 558 59.9
FvH4_4g24980 Fragaria vesca HOM05D007119 ORTHO05D009220 2.8e-183 646.0 544 61.8
TWI36G1063 Tripterygium wilfordii HOM05D007119 ORTHO05D009220 3.6e-183 645.6 563 59.9
Gorai.008G162700 Gossypium raimondii HOM05D007119 ORTHO05D009220 1.1e-182 644.0 555 60.7
Gohir.D12G151200 Gossypium hirsutum HOM05D007119 ORTHO05D009220 1.8e-182 643.3 555 60.7
Duzib248G1022 Durio zibethinus HOM05D007119 ORTHO05D009220 1.5e-181 640.2 561 60.2
Prupe.1G238900 Prunus persica HOM05D007119 ORTHO05D009220 1.7e-180 636.7 545 62.2
arahy.Tifrunner.gnm1.ann1.3UY64B Arachis hypogaea HOM05D007119 ORTHO05D009220 1.4e-179 633.6 554 58.8
arahy.Tifrunner.gnm1.ann1.U7Q0BA Arachis hypogaea HOM05D007119 ORTHO05D009220 1.4e-179 633.6 554 58.8
Actinidia15126 Actinidia chinensis HOM05D007119 ORTHO05D009220 3.2e-179 632.5 561 59.2
TPR.G14230 Trifolium pratense HOM05D007119 ORTHO05D009220 3.2e-179 632.5 568 57.9
Medtr3g086170 Medicago truncatula HOM05D007119 ORTHO05D009220 2.7e-178 629.4 553 58.2
MD13G1107500 Malus domestica HOM05D007119 ORTHO05D009220 6.0e-178 628.2 546 60.3
Lalb_Chr23g0277791 Lupinus albus HOM05D007119 ORTHO05D009220 3.9e-177 625.5 553 59.5
CANSAT01G1522 Cannabis sativa HOM05D007119 ORTHO05D009220 3.3e-176 622.5 554 59.4
Glyma.18G011400 Glycine max HOM05D007119 ORTHO05D009220 4.3e-176 622.1 554 58.5
Glyma.11G245800 Glycine max HOM05D007119 ORTHO05D009220 5.6e-176 621.7 558 58.1
Hma1.2p1_0079F.1_g041390 Hydrangea macrophylla HOM05D007119 ORTHO05D009220 1.2e-175 620.5 549 59.6
Gorai.005G173800 Gossypium raimondii HOM05D007119 ORTHO05D009220 1.6e-175 620.2 554 58.8
Lj6g0003042 Lotus japonicus HOM05D007119 ORTHO05D009220 1.6e-175 620.2 553 58.4
THA.LOC104825682 Tarenaya hassleriana HOM05D007119 ORTHO05D009220 2.8e-175 619.4 554 57.4
MD16G1107500 Malus domestica HOM05D007119 ORTHO05D009220 1.2e-173 614.0 546 59.7
Phvul.001G257500 Phaseolus vulgaris HOM05D007119 ORTHO05D009220 1.4e-171 607.1 554 57.0
TAR371G0886 Trochodendron aralioides HOM05D007119 ORTHO05D009220 1.4e-171 607.1 540 59.3
Gohir.A03G131100 Gossypium hirsutum HOM05D007119 ORTHO05D009220 1.6e-170 603.6 554 57.6
vmacro16153 Vaccinium macrocarpon HOM05D007119 ORTHO05D009220 1.6e-170 603.6 611 54.8
Sed0010682 Sechium edule HOM05D007119 ORTHO05D009220 2.7e-170 602.8 556 57.2
Gohir.A12G146600 Gossypium hirsutum HOM05D007119 ORTHO05D009220 3.5e-170 602.4 555 57.7
CAN.G49.9 Capsicum annuum HOM05D007119 ORTHO05D009220 7.8e-170 601.3 561 55.4
Aa31LG2G6270 Aethionema arabicum HOM05D007119 ORTHO05D009220 6.6e-169 598.2 547 56.3
Carub.0005s0397 Capsella rubella HOM05D007119 ORTHO05D009220 6.6e-169 598.2 560 55.0
CsaV3_5G030670 Cucumis sativus L. HOM05D007119 ORTHO05D009220 2.1e-167 593.2 556 56.7
AT3G26090 Arabidopsis thaliana HOM05D007119 ORTHO05D009220 4.7e-167 592.0 554 53.8
AL5G14790 Arabidopsis lyrata HOM05D007119 ORTHO05D009220 1.1e-166 590.9 554 53.8
Cc11_g16270 Coffea canephora HOM05D007119 ORTHO05D009220 1.8e-166 590.1 561 55.1
VMungo1383G3713 Vigna mungo HOM05D007119 ORTHO05D009220 1.5e-165 587.0 554 55.8
Nn3g16605 Nelumbo nucifera HOM05D007119 ORTHO05D009220 9.9e-165 584.3 549 55.4
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 6.4e-164 581.6 548 54.4
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 6.4e-164 581.6 548 54.4
BcaC06g31092 Brassica carinata HOM05D007119 ORTHO05D009220 4.2e-163 578.9 548 54.4
Sp2g15290 Schrenkiella parvula HOM05D007119 ORTHO05D009220 4.2e-163 578.9 548 54.7
DCAR_007027 Daucus carota HOM05D007119 ORTHO05D009220 1.6e-162 577.0 545 54.1
BcaC06g33928 Brassica carinata HOM05D007119 ORTHO05D009220 2.1e-162 576.6 548 54.0
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 4.6e-162 575.5 548 54.2
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 1.0e-161 574.3 548 54.0
CARHR147090 Cardamine hirsuta HOM05D007119 ORTHO05D009220 6.6e-161 571.6 548 53.8
PSO017G0770 Papaver somniferum HOM05D007119 ORTHO05D009220 8.7e-161 571.2 551 54.4
Aqoxy3G01324 Aquilegia oxysepala HOM05D007119 ORTHO05D009220 3.3e-160 569.3 553 52.6
Hund25421 Selenicereus undatus HOM05D007119 ORTHO05D009220 4.3e-160 568.9 561 53.1
FAN22G2246 Fragaria x ananassa HOM05D007119 ORTHO05D009220 1.4e-158 563.9 534 57.3
BcaB07g30623 Brassica carinata HOM05D007119 ORTHO05D009220 1.5e-157 560.5 548 52.7
Sc14g0008910 Simmondsia chinensis HOM05D007119 ORTHO05D009220 1.3e-156 557.4 545 53.0
Solyc05g014160.4 Solanum lycopersicum HOM05D007119 ORTHO05D009220 4.9e-156 555.4 521 55.9
HanXRQChr12g0372081 Helianthus annuus HOM05D007119 ORTHO05D009220 1.4e-155 553.9 542 53.3
Migut.E00228 Erythranthe guttata HOM05D007119 ORTHO05D009220 2.4e-155 553.1 562 52.7
MSTRG.13331 Avicennia marina HOM05D007119 ORTHO05D009220 5.4e-155 552.0 545 53.4
A09p25150 Brassica napus HOM05D007119 ORTHO05D009220 1.2e-154 550.8 548 51.6
BraA09t38102Z Brassica rapa HOM05D007119 ORTHO05D009220 2.7e-154 549.7 545 51.7
BcaC04g21404 Brassica carinata HOM05D007119 ORTHO05D009220 4.6e-154 548.9 548 51.6
C09p32210 Brassica napus HOM05D007119 ORTHO05D009220 4.6e-154 548.9 548 51.6
BolC9t56067H Brassica oleracea HOM05D007119 ORTHO05D009220 4.6e-154 548.9 548 51.6
Lsat_1_v5_gn_8_150440 Lactuca sativa HOM05D007119 ORTHO05D009220 6.0e-154 548.5 545 51.7
Gohir.D02G154800 Gossypium hirsutum HOM05D007119 ORTHO05D009220 9.6e-152 541.2 488 58.8
Psat5g093400 Pisum sativum HOM05D007119 ORTHO05D009220 3.6e-151 539.3 491 58.5
AUR62024193 Chenopodium quinoa HOM05D007119 ORTHO05D009220 2.4e-150 536.6 552 50.7
ClCG05G026170 Citrullus lanatus HOM05D007119 ORTHO05D009220 3.4e-149 532.7 558 52.3
Ah.03g133650 Amaranthus hybridus HOM05D007119 ORTHO05D009220 9.9e-149 531.2 550 49.3
SalBow8G1200 Salvia bowleyana HOM05D007119 ORTHO05D009220 6.4e-148 528.5 537 51.8
Lj6C818G13 Lonicera japonica HOM05D007119 ORTHO05D009220 1.1e-147 527.7 532 55.5
ATR0824G105 Amborella trichopoda HOM05D007119 ORTHO05D009220 2.4e-147 526.6 545 50.5
ECA233G0282 Erigeron canadensis HOM05D007119 ORTHO05D009220 1.6e-146 523.9 523 51.8
Thhalv10004169m.g Eutrema salsugineum HOM05D007119 ORTHO05D009220 1.0e-137 494.6 485 52.8
Nn4g22487 Nelumbo nucifera HOM05D007119 ORTHO05D009220 1.1e-136 491.1 467 55.2
Peaxi162Scf00128g00648 Petunia axillaris HOM05D007119 ORTHO05D009220 5.7e-136 488.8 492 52.8
EL10As2g23223 Beta vulgaris HOM05D007119 ORTHO05D009220 6.9e-134 481.9 561 46.7
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 2.5e-131 473.4 558 47.3
MELO3C011902.2 Cucumis melo HOM05D007119 ORTHO05D009220 7.9e-122 441.8 556 47.8
SGA_v2.0_scaffold87G27113 Striga asiatica HOM05D007119 ORTHO05D009220 7.9e-122 441.8 490 48.0
Ca_16499_v3 Cicer arietinum L. HOM05D007119 ORTHO05D009220 2.9e-116 423.3 336 64.9
Nitab4.5_0002688g0040 Nicotiana tabacum HOM05D007119 ORTHO05D009220 2.5e-115 420.2 422 53.8
Sopen05g009180 Solanum pennellii HOM05D007119 ORTHO05D009220 2.3e-113 413.7 340 62.1
Oeu012665.1 Olea europaea HOM05D007119 ORTHO05D009220 5.3e-110 402.5 399 51.6
SEGI_05094 Sequoiadendron giganteum HOM05D007119 ORTHO05D009220 3.8e-100 369.8 496 41.9
AUR62005541 Chenopodium quinoa HOM05D007119 ORTHO05D009220 3.4e-96 356.7 345 54.8
MBI08_g43995_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 4.7e-90 336.3 296 60.8
MBI08_g44099_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 4.7e-90 336.3 296 60.8
AagrBONN_evm.TU.Sc2ySwM_117.1226 Anthoceros agrestis HOM05D001585 ORTHO05D001677 1.5e-67 261.5 553 33.3
Nitab4.5_0000041g0220 Nicotiana tabacum HOM05D007119 ORTHO05D009220 2.8e-66 257.3 224 62.1
HanXRQChr08g0208021 Helianthus annuus HOM05D007119 ORTHO05D009220 6.4e-63 246.1 230 55.7
PGSC0003DMG401010743 Solanum tuberosum HOM05D007119 ORTHO05D009220 1.6e-61 241.5 212 61.3
SMO165G0024 Selaginella moellendorffii HOM05D007119 ORTHO05D009220 1.8e-57 228.0 446 32.7
CANSAT25G1465 Cannabis sativa HOM05D007119 ORTHO05D009220 4.6e-37 160.2 127 63.8
HanXRQChr08g0208031 Helianthus annuus HOM05D007119 ORTHO05D009220 5.6e-27 126.7 92 65.2
Nitab4.5_0002688g0050 Nicotiana tabacum HOM05D007119 ORTHO05D036862 1.0e-15 89.4 66 62.1
Nitab4.5_0000041g0230 Nicotiana tabacum HOM05D007119 ORTHO05D036862 2.9e-15 87.8 66 60.6
Peaxi162Scf00128g00647 Petunia axillaris HOM05D007119 ORTHO05D036862 5.1e-12 77.0 78 50.0


User provided reference genes

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