Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra08G0132900 Salix brachista HOM05D005697 ORTHO05D006951 3.0e-120 435.3 232 100.0
Potri.008G174400 Populus trichocarpa HOM05D005697 ORTHO05D006951 5.2e-96 354.8 247 80.2
Sabra10G0044100 Salix brachista HOM05D005697 ORTHO05D006951 3.6e-81 305.4 233 73.4
Potri.010G062600 Populus trichocarpa HOM05D005697 ORTHO05D006951 1.4e-80 303.5 232 74.1
Manes.03G155600 Manihot esculenta HOM05D005697 ORTHO05D006951 4.7e-65 251.9 234 62.8
Manes.15G047800 Manihot esculenta HOM05D005697 ORTHO05D006951 1.4e-56 223.8 236 58.5
QL06p022167 Quercus lobata HOM05D005697 ORTHO05D006951 9.6e-50 201.1 213 55.4
Thecc.04G218700 Theobroma cacao HOM05D005697 ORTHO05D006951 8.1e-49 198.0 220 50.5
CiPaw.01G174800 Carya illinoinensis HOM05D005697 ORTHO05D006951 1.8e-48 196.8 224 52.2
CiPaw.02G104000 Carya illinoinensis HOM05D005697 ORTHO05D006951 3.1e-48 196.1 217 50.7
Cpa.g.sc59.48 Carica papaya HOM05D005697 ORTHO05D006951 9.0e-48 194.5 212 55.2
MD13G1226700 Malus domestica HOM05D005697 ORTHO05D006951 9.0e-48 194.5 250 48.0
Prupe.1G054100 Prunus persica HOM05D005697 ORTHO05D006951 7.6e-47 191.4 213 52.6
arahy.Tifrunner.gnm1.ann1.1SMG72 Arachis hypogaea HOM05D005697 ORTHO05D006951 1.3e-46 190.7 218 52.3
Glyma.20G081000 Glycine max HOM05D005697 ORTHO05D006951 1.3e-46 190.7 204 53.9
Haze_11522 Corylus avellana HOM05D005697 ORTHO05D006951 3.8e-46 189.1 200 55.5
Duzib151G0493 Durio zibethinus HOM05D005697 ORTHO05D006951 3.8e-46 189.1 226 48.2
Haze_11516 Corylus avellana HOM05D005697 ORTHO05D006951 8.4e-46 188.0 200 55.0
arahy.Tifrunner.gnm1.ann1.BKX7X4 Arachis hypogaea HOM05D005697 ORTHO05D006951 1.4e-45 187.2 215 52.1
FAN07G2767 Fragaria x ananassa HOM05D005697 ORTHO05D006951 3.2e-45 186.0 214 51.9
TWI09G0842 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 4.2e-45 185.7 213 52.6
RcHm_v2.0_Chr4g0396171 Rosa chinensis HOM05D005697 ORTHO05D006951 7.1e-45 184.9 214 52.8
FAN22G1047 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.2e-44 184.1 214 51.4
Glyma.10G130200 Glycine max HOM05D005697 ORTHO05D006951 2.1e-44 183.3 206 53.4
FvH4_4g05260 Fragaria vesca HOM05D005697 ORTHO05D006951 3.5e-44 182.6 215 52.1
TWI53G2060 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 3.5e-44 182.6 202 53.0
FAN12G1366 Fragaria x ananassa HOM05D005697 ORTHO05D006951 6.0e-44 181.8 215 52.1
FAN17G2424 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.0e-43 181.0 214 51.4
Cfa014837 Carpinus fangiana HOM05D005697 ORTHO05D006951 1.3e-43 180.6 208 52.4
COL.COLO4_07143 Corchorus olitorius HOM05D005697 ORTHO05D006951 2.3e-43 179.9 218 48.6
Atru.chr4.1856 Acer truncatum HOM05D005697 ORTHO05D006951 5.1e-43 178.7 231 50.2
Eucgr.H02876 Eucalyptus grandis HOM05D005697 ORTHO05D006951 6.7e-43 178.3 210 52.4
TPR.G23989 Trifolium pratense HOM05D005697 ORTHO05D006951 6.7e-43 178.3 210 48.6
Peaxi162Scf01007g00013 Petunia axillaris HOM05D005697 ORTHO05D006951 1.1e-42 177.6 224 47.3
Cc03_g06970 Coffea canephora HOM05D005697 ORTHO05D006951 3.3e-42 176.0 205 50.2
Dinv27139 Davidia involucrata HOM05D005697 ORTHO05D006951 9.6e-42 174.5 227 49.3
Nitab4.5_0002738g0060 Nicotiana tabacum HOM05D005697 ORTHO05D006951 3.7e-41 172.6 211 50.2
Nn1g03052 Nelumbo nucifera HOM05D005697 ORTHO05D006951 6.2e-41 171.8 211 48.8
VMungo0720G1671 Vigna mungo HOM05D005697 ORTHO05D006951 1.4e-40 170.6 207 48.8
Rhsim02G0049300 Rhododendron simsii HOM05D005697 ORTHO05D006951 1.2e-39 167.5 215 48.4
Medtr1g046070 Medicago truncatula HOM05D005697 ORTHO05D006951 2.6e-39 166.4 219 47.5
AUR62035897 Chenopodium quinoa HOM05D005697 ORTHO05D006951 3.4e-39 166.0 248 44.0
Sed0003887 Sechium edule HOM05D005697 ORTHO05D006951 3.4e-39 166.0 213 46.0
AUR62035343 Chenopodium quinoa HOM05D005697 ORTHO05D006951 1.3e-38 164.1 235 47.7
ClCG06G017260 Citrullus lanatus HOM05D005697 ORTHO05D006951 1.7e-38 163.7 217 45.6
Hund24861 Selenicereus undatus HOM05D005697 ORTHO05D006951 1.7e-38 163.7 202 48.0
CsaV3_1G001240 Cucumis sativus L. HOM05D005697 ORTHO05D006951 2.2e-38 163.3 211 45.0
Duzib212G0179 Durio zibethinus HOM05D005697 ORTHO05D006951 2.9e-38 162.9 219 47.0
CANSAT78G1745 Cannabis sativa HOM05D005697 ORTHO05D006951 3.8e-38 162.5 239 44.8
Phvul.007G233100 Phaseolus vulgaris HOM05D005697 ORTHO05D006951 2.4e-37 159.8 177 52.5
Lj6g0023034 Lotus japonicus HOM05D005697 ORTHO05D006951 3.2e-37 159.5 180 53.9
Lalb_Chr19g0128591 Lupinus albus HOM05D005697 ORTHO05D006951 4.2e-37 159.1 194 50.0
vmacro15494 Vaccinium macrocarpon HOM05D005697 ORTHO05D006951 4.2e-37 159.1 234 44.4
PGSC0003DMG400008629 Solanum tuberosum HOM05D005697 ORTHO05D006951 2.7e-36 156.4 209 45.0
Solyc12g097060.1 Solanum lycopersicum HOM05D005697 ORTHO05D006951 3.5e-36 156.0 206 45.1
Nitab4.5_0001998g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 1.8e-35 153.7 211 48.3
Solyc09g091060.3 Solanum lycopersicum HOM05D005697 ORTHO05D006951 3.9e-35 152.5 222 44.1
Oeu008818.1 Olea europaea HOM05D005697 ORTHO05D006951 6.7e-35 151.8 205 44.9
Lsat_1_v5_gn_6_67840 Lactuca sativa HOM05D005697 ORTHO05D006951 8.7e-35 151.4 197 47.2
Gorai.006G218600 Gossypium raimondii HOM05D005697 ORTHO05D006951 1.9e-34 150.2 210 44.8
Sed0013611 Sechium edule HOM05D005697 ORTHO05D006951 1.9e-34 150.2 211 45.0
MBI07_g15425_MAGBIO Magnolia biondii HOM05D005697 ORTHO05D006951 2.5e-34 149.8 211 43.6
TAR365G1050 Trochodendron aralioides HOM05D005697 ORTHO05D006951 3.3e-34 149.4 208 42.8
CSS0038279 Camellia sinensis var. sinensis HOM05D005697 ORTHO05D006951 4.3e-34 149.1 257 40.9
Gohir.D09G195200 Gossypium hirsutum HOM05D005697 ORTHO05D006951 9.6e-34 147.9 210 44.8
Oeu007537.1 Olea europaea HOM05D005697 ORTHO05D006951 1.6e-33 147.1 211 42.7
EL10Ac3g06730 Beta vulgaris HOM05D005697 ORTHO05D006951 2.1e-33 146.7 208 42.3
Lalb_Chr03g0036851 Lupinus albus HOM05D005697 ORTHO05D006951 2.1e-33 146.7 211 45.5
SalBow3G3550 Salvia bowleyana HOM05D005697 ORTHO05D006951 2.1e-33 146.7 221 41.6
ECA233G3140 Erigeron canadensis HOM05D005697 ORTHO05D006951 3.7e-33 146.0 180 48.3
SalBow3G1865 Salvia bowleyana HOM05D005697 ORTHO05D006951 4.8e-33 145.6 221 40.3
TAR362G0923 Trochodendron aralioides HOM05D005697 ORTHO05D006951 6.2e-33 145.2 200 44.5
MELO3C026270.2 Cucumis melo HOM05D005697 ORTHO05D006951 8.2e-33 144.8 211 41.7
DCAR_024305 Daucus carota HOM05D005697 ORTHO05D006951 1.8e-32 143.7 215 40.9
Nn3g19835 Nelumbo nucifera HOM05D005697 ORTHO05D006951 1.8e-32 143.7 231 40.7
MSTRG.24645 Avicennia marina HOM05D005697 ORTHO05D006951 9.0e-32 141.4 205 45.4
Sc19g0005740 Simmondsia chinensis HOM05D005697 ORTHO05D006951 7.6e-31 138.3 169 55.0
Sopen09g034040 Solanum pennellii HOM05D005697 ORTHO05D006951 7.6e-31 138.3 222 41.9
Ah.13g075010 Amaranthus hybridus HOM05D005697 ORTHO05D006951 3.2e-29 132.9 224 39.7
CAN.G812.40 Capsicum annuum HOM05D005697 ORTHO05D006951 3.2e-29 132.9 222 42.3
MSTRG.21934 Avicennia marina HOM05D005697 ORTHO05D006951 1.6e-28 130.6 221 40.7
Gohir.A09G201000 Gossypium hirsutum HOM05D005697 ORTHO05D006951 2.7e-28 129.8 218 41.3
PSO063G5372 Papaver somniferum HOM05D005697 ORTHO05D006951 1.0e-27 127.9 219 39.7
PSO339G1845 Papaver somniferum HOM05D005697 ORTHO05D006951 3.0e-27 126.3 223 38.6
Peaxi162Scf00125g01016 Petunia axillaris HOM05D005697 ORTHO05D006951 3.0e-27 126.3 202 43.6
GSVIVG01001870001 Vitis vinifera HOM05D005697 ORTHO05D006951 5.7e-26 122.1 119 58.0
THA.LOC104804567 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 6.3e-25 118.6 204 40.7
THA.LOC104808734 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 1.4e-24 117.5 165 47.3
Actinidia11384 Actinidia chinensis HOM05D005697 ORTHO05D006951 1.8e-24 117.1 98 62.2
Ciclev10005805m.g Citrus clementina HOM05D005697 ORTHO05D006951 6.9e-24 115.2 218 40.8
CDE05G2497 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 1.3e-22 110.9 207 35.3
Migut.N00325 Erythranthe guttata HOM05D005697 ORTHO05D006951 3.8e-22 109.4 205 39.0
THA.LOC104821627 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 6.5e-22 108.6 173 43.9
Actinidia39942 Actinidia chinensis HOM05D005697 ORTHO05D006951 1.1e-21 107.8 175 40.0
CAN.G566.3 Capsicum annuum HOM05D005697 ORTHO05D006951 1.4e-21 107.5 102 55.9
Sp7g11140 Schrenkiella parvula HOM05D005697 ORTHO05D006951 7.2e-21 105.1 180 41.1
BcaC02g09418 Brassica carinata HOM05D005697 ORTHO05D006951 2.1e-20 103.6 222 36.5
BolC4t25821H Brassica oleracea HOM05D005697 ORTHO05D006951 2.1e-20 103.6 222 36.5
A04p08640 Brassica napus HOM05D005697 ORTHO05D006951 4.6e-20 102.4 181 38.7
BraA07t28595Z Brassica rapa HOM05D005697 ORTHO05D006951 6.1e-20 102.1 234 35.9
BcaB06g26605 Brassica carinata HOM05D005697 ORTHO05D006951 1.4e-19 100.9 212 38.2
C04p42400 Brassica napus HOM05D005697 ORTHO05D006951 1.4e-19 100.9 222 36.0
BcaB03g16086 Brassica carinata HOM05D005697 ORTHO05D006951 2.3e-19 100.1 222 35.1
BcaC06g35669 Brassica carinata HOM05D005697 ORTHO05D006951 3.0e-19 99.8 234 35.5
C07p12260 Brassica napus HOM05D005697 ORTHO05D006951 3.0e-19 99.8 234 35.5
BolC7t41693H Brassica oleracea HOM05D005697 ORTHO05D006951 3.0e-19 99.8 234 35.5
A07p08110 Brassica napus HOM05D005697 ORTHO05D006951 3.9e-19 99.4 218 36.7
SGA_v2.0_scaffold31G12607 Striga asiatica HOM05D005697 ORTHO05D006951 3.9e-19 99.4 207 34.3
CDE02G0931 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 1.9e-18 97.1 174 40.2
Carub.0007s2900 Capsella rubella HOM05D005697 ORTHO05D006951 1.3e-17 94.4 166 39.2
HPP92_005453 Vanilla planifolia HOM05D005697 ORTHO05D006951 2.2e-17 93.6 202 39.1
CARHR100340 Cardamine hirsuta HOM05D005697 ORTHO05D006951 2.8e-17 93.2 178 39.3
CARHR219170 Cardamine hirsuta HOM05D005697 ORTHO05D006951 6.3e-17 92.0 184 35.3
unitig_26.g9545 Utricularia gibba HOM05D005697 ORTHO05D006951 6.3e-17 92.0 203 32.5
Psat6g106680 Pisum sativum HOM05D005697 ORTHO05D006951 8.2e-17 91.7 89 53.9
Aa31LG9G4120 Aethionema arabicum HOM05D005697 ORTHO05D006951 1.8e-16 90.5 188 34.6
AL7G43130 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 2.4e-16 90.1 199 33.7
Thhalv10026312m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 2.4e-16 90.1 205 33.2
Glyma.14G108200 Glycine max HOM05D005697 ORTHO05D006951 3.1e-16 89.7 100 49.0
AT4G13540 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 2.6e-15 86.7 197 34.0
Thhalv10002645m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 1.3e-14 84.3 231 32.0
Aa31LG8G10940 Aethionema arabicum HOM05D005697 ORTHO05D006951 5.0e-14 82.4 181 34.3
AL3G39620 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 5.0e-14 82.4 122 41.8
Carub.0003s2459 Capsella rubella HOM05D005697 ORTHO05D006951 4.2e-13 79.3 113 42.5
PGSC0003DMG400011585 Solanum tuberosum HOM05D005697 ORTHO05D006951 1.2e-12 77.8 152 34.2
Nitab4.5_0000451g0070 Nicotiana tabacum HOM05D005697 ORTHO05D006951 1.6e-12 77.4 136 39.0
Sp3g22030 Schrenkiella parvula HOM05D005697 ORTHO05D006951 1.8e-11 73.9 240 29.6
AT3G23930 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 3.9e-11 72.8 196 32.7
CDE08G0630 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 2.8e-09 66.6 148 35.1
BraA04t16558Z Brassica rapa HOM05D005697 ORTHO05D006951 6.3e-09 65.5 135 36.3
Nitab4.5_0000867g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 2.6e-07 60.1 139 34.5


User provided reference genes

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