Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra08G0124400 Salix brachista HOM05D005428 ORTHO05D006876 5.1e-31 137.1 70 100.0
Ciclev10004875m.g Citrus clementina HOM05D005428 ORTHO05D006876 7.0e-12 73.6 71 57.7
Ciclev10004873m.g Citrus clementina HOM05D005428 ORTHO05D006876 9.1e-12 73.2 71 57.7
Eucgr.H03154 Eucalyptus grandis HOM05D005428 ORTHO05D006876 7.7e-11 70.1 71 56.3
MSTRG.24699 Avicennia marina HOM05D005428 ORTHO05D006876 1.0e-10 69.7 71 54.9
CiPaw.01G190000 Carya illinoinensis HOM05D005428 ORTHO05D006876 1.3e-10 69.3 71 53.5
Ca_09838_v3 Cicer arietinum L. HOM05D005428 ORTHO05D006876 1.3e-10 69.3 71 54.9
Migut.N00242 Erythranthe guttata HOM05D005428 ORTHO05D006876 2.2e-10 68.6 71 56.3
Hund11855 Selenicereus undatus HOM05D005428 ORTHO05D006876 2.2e-10 68.6 72 54.2
arahy.Tifrunner.gnm1.ann1.562L79 Arachis hypogaea HOM05D005428 ORTHO05D006876 2.9e-10 68.2 71 54.9
arahy.Tifrunner.gnm1.ann1.WBEP1R Arachis hypogaea HOM05D005428 ORTHO05D006876 2.9e-10 68.2 71 54.9
Carub.0008s0503 Capsella rubella HOM05D005428 ORTHO05D006876 2.9e-10 68.2 71 54.9
CANSAT78G2122 Cannabis sativa HOM05D005428 ORTHO05D006876 3.8e-10 67.8 71 54.9
Ciclev10007151m.g Citrus clementina HOM05D005428 ORTHO05D006876 3.8e-10 67.8 86 48.8
TWI09G0474 Tripterygium wilfordii HOM05D005428 ORTHO05D006876 3.8e-10 67.8 71 54.9
Manes.03G168500 Manihot esculenta HOM05D005428 ORTHO05D006876 5.0e-10 67.4 71 53.5
Sabra10G0032700 Salix brachista HOM05D005428 ORTHO05D006876 5.0e-10 67.4 71 56.3
THA.LOC104801094 Tarenaya hassleriana HOM05D005428 ORTHO05D006876 5.0e-10 67.4 71 53.5
Cfa008373 Carpinus fangiana HOM05D005428 ORTHO05D006876 6.5e-10 67.0 71 53.5
Dinv29906 Davidia involucrata HOM05D005428 ORTHO05D006876 6.5e-10 67.0 71 54.9
Lalb_Chr21g0312281 Lupinus albus HOM05D005428 ORTHO05D006876 6.5e-10 67.0 71 52.1
Psat6g125320 Pisum sativum HOM05D005428 ORTHO05D006876 6.5e-10 67.0 71 53.5
Potri.010G076100 Populus trichocarpa HOM05D005428 ORTHO05D006876 6.5e-10 67.0 71 54.9
Aa31LG5G3610 Aethionema arabicum HOM05D005428 ORTHO05D006876 8.5e-10 66.6 74 52.7
Nitab4.5_0000525g0250 Nicotiana tabacum HOM05D005428 ORTHO05D006876 8.5e-10 66.6 70 55.7
QL06p015833 Quercus lobata HOM05D005428 ORTHO05D006876 8.5e-10 66.6 71 53.5
Sed0003134 Sechium edule HOM05D005428 ORTHO05D006876 8.5e-10 66.6 71 53.5
GSVIVG01018124001 Vitis vinifera HOM05D005428 ORTHO05D006876 8.5e-10 66.6 71 52.1
DCAR_027281 Daucus carota HOM05D005428 ORTHO05D006876 1.1e-09 66.2 71 53.5
Duzib151G0442 Durio zibethinus HOM05D005428 ORTHO05D006876 1.1e-09 66.2 71 53.5
MD13G1207900 Malus domestica HOM05D005428 ORTHO05D006876 1.1e-09 66.2 71 53.5
SGA_v2.0_scaffold79G25631 Striga asiatica HOM05D005428 ORTHO05D006876 1.1e-09 66.2 68 55.9
TAR365G0225 Trochodendron aralioides HOM05D005428 ORTHO05D006876 1.1e-09 66.2 71 52.1
Haze_11306 Corylus avellana HOM05D005428 ORTHO05D006876 1.5e-09 65.9 73 52.1
Peaxi162Scf00813g00223 Petunia axillaris HOM05D005428 ORTHO05D006876 1.5e-09 65.9 70 54.3
AL8G16680 Arabidopsis lyrata HOM05D005428 ORTHO05D006876 1.9e-09 65.5 71 53.5
CSS0003291 Camellia sinensis var. sinensis HOM05D005428 ORTHO05D006876 1.9e-09 65.5 71 50.7
CSS0012294 Camellia sinensis var. sinensis HOM05D005428 ORTHO05D006876 1.9e-09 65.5 71 50.7
Hma1.2p1_1276F.1_g272180 Hydrangea macrophylla HOM05D005428 ORTHO05D006876 1.9e-09 65.5 71 52.1
MBI11_g34854_MAGBIO Magnolia biondii HOM05D005428 ORTHO05D006876 1.9e-09 65.5 71 52.1
Nn1g02619 Nelumbo nucifera HOM05D005428 ORTHO05D006876 1.9e-09 65.5 71 52.1
Nitab4.5_0001418g0050 Nicotiana tabacum HOM05D005428 ORTHO05D006876 1.9e-09 65.5 71 54.9
Oeu032589.1 Olea europaea HOM05D005428 ORTHO05D006876 1.9e-09 65.5 71 52.1
vmacro08417 Vaccinium macrocarpon HOM05D005428 ORTHO05D006876 1.9e-09 65.5 71 52.1
Atru.BG.84.p Acer truncatum HOM05D005428 ORTHO05D006876 2.5e-09 65.1 71 49.3
AT5G43600 Arabidopsis thaliana HOM05D005428 ORTHO05D006876 2.5e-09 65.1 71 53.5
BcaC06g34641 Brassica carinata HOM05D005428 ORTHO05D006876 2.5e-09 65.1 71 53.5
C07p26210 Brassica napus HOM05D005428 ORTHO05D006876 2.5e-09 65.1 71 53.5
Actinidia40084 Actinidia chinensis HOM05D005428 ORTHO05D006876 3.2e-09 64.7 71 49.3
BcaC06g31687 Brassica carinata HOM05D005428 ORTHO05D006876 3.2e-09 64.7 71 53.5
Haze_11309 Corylus avellana HOM05D005428 ORTHO05D006876 3.2e-09 64.7 73 50.7
Prupe.1G031400 Prunus persica HOM05D005428 ORTHO05D006876 3.2e-09 64.7 71 52.1
Sp2g08410 Schrenkiella parvula HOM05D005428 ORTHO05D006876 3.2e-09 64.7 71 53.5
COL.COLO4_15798 Corchorus olitorius HOM05D005428 ORTHO05D006876 4.2e-09 64.3 71 52.1
Thhalv10003195m.g Eutrema salsugineum HOM05D005428 ORTHO05D006876 4.2e-09 64.3 71 52.1
Medtr1g075320 Medicago truncatula HOM05D005428 ORTHO05D006876 4.2e-09 64.3 71 50.7
RcHm_v2.0_Chr4g0390621 Rosa chinensis HOM05D005428 ORTHO05D006876 4.2e-09 64.3 71 52.1
RcHm_v2.0_Chr4g0390681 Rosa chinensis HOM05D005428 ORTHO05D006876 4.2e-09 64.3 71 52.1
Lj6A657G48 Lonicera japonica HOM05D005428 ORTHO05D006876 5.5e-09 63.9 70 54.3
Aqoxy2G03568 Aquilegia oxysepala HOM05D005428 ORTHO05D006876 7.2e-09 63.5 71 50.7
FvH4_4g02810 Fragaria vesca HOM05D005428 ORTHO05D006876 7.2e-09 63.5 71 52.1
FAN12G3785 Fragaria x ananassa HOM05D005428 ORTHO05D006876 7.2e-09 63.5 71 52.1
Cpa.g.sc58.52 Carica papaya HOM05D005428 ORTHO05D006876 9.4e-09 63.2 71 53.5
AUR62002250 Chenopodium quinoa HOM05D005428 ORTHO05D006876 9.4e-09 63.2 71 49.3
Gorai.006G070400 Gossypium raimondii HOM05D005428 ORTHO05D006876 9.4e-09 63.2 71 52.1
Lalb_Chr06g0169281 Lupinus albus HOM05D005428 ORTHO05D006876 9.4e-09 63.2 71 50.7
PGR004G1836 Punica granatum HOM05D005428 ORTHO05D006876 9.4e-09 63.2 71 50.7
SalBow3G1895 Salvia bowleyana HOM05D005428 ORTHO05D006876 9.4e-09 63.2 71 52.1
PGSC0003DMG400015115 Solanum tuberosum HOM05D005428 ORTHO05D006876 9.4e-09 63.2 71 52.1
A06p47790 Brassica napus HOM05D005428 ORTHO05D006876 1.2e-08 62.8 71 52.1
BolC7t43148H Brassica oleracea HOM05D005428 ORTHO05D006876 1.2e-08 62.8 71 52.1
BraA06t27649Z Brassica rapa HOM05D005428 ORTHO05D006876 1.2e-08 62.8 71 52.1
AUR62015461 Chenopodium quinoa HOM05D005428 ORTHO05D006876 1.2e-08 62.8 71 47.9
Gohir.A09G057600 Gossypium hirsutum HOM05D005428 ORTHO05D006876 1.2e-08 62.8 71 52.1
Gohir.D09G056800 Gossypium hirsutum HOM05D005428 ORTHO05D006876 1.2e-08 62.8 71 52.1
Sc19g0002030 Simmondsia chinensis HOM05D005428 ORTHO05D006876 1.2e-08 62.8 71 49.3
Sopen09g032350 Solanum pennellii HOM05D005428 ORTHO05D006876 1.2e-08 62.8 71 52.1
TPR.G27197 Trifolium pratense HOM05D005428 ORTHO05D006876 1.2e-08 62.8 71 52.1
CAN.G1007.11 Capsicum annuum HOM05D005428 ORTHO05D006876 1.6e-08 62.4 71 52.1
Lj5g0022725 Lotus japonicus HOM05D005428 ORTHO05D006876 1.6e-08 62.4 71 50.7
EL10Ac3g05890 Beta vulgaris HOM05D005428 ORTHO05D006876 2.1e-08 62.0 73 47.9
CsaV3_3G012550 Cucumis sativus L. HOM05D005428 ORTHO05D006876 2.1e-08 62.0 71 50.7
Rhsim04G0189900 Rhododendron simsii HOM05D005428 ORTHO05D006876 2.1e-08 62.0 71 49.3
Solyc09g083410.4 Solanum lycopersicum HOM05D005428 ORTHO05D006876 2.1e-08 62.0 71 50.7
Cc03_g04910 Coffea canephora HOM05D005428 ORTHO05D006876 2.7e-08 61.6 71 50.7
Thecc.04G246600 Theobroma cacao HOM05D005428 ORTHO05D006876 2.7e-08 61.6 71 50.7
CARHR006240 Cardamine hirsuta HOM05D005428 ORTHO05D006876 3.6e-08 61.2 71 50.7
Lsat_1_v5_gn_5_72961 Lactuca sativa HOM05D005428 ORTHO05D006876 3.6e-08 61.2 70 51.4
unitig_46.g18501 Utricularia gibba HOM05D005428 ORTHO05D006876 4.7e-08 60.8 72 47.2
ECA233G3252 Erigeron canadensis HOM05D005428 ORTHO05D006876 1.0e-07 59.7 71 49.3
ATR0665G589 Amborella trichopoda HOM05D005428 ORTHO05D006876 1.4e-07 59.3 71 49.3
PSO210G3950 Papaver somniferum HOM05D005428 ORTHO05D006876 1.4e-07 59.3 71 47.9
HanXRQChr12g0386131 Helianthus annuus HOM05D005428 ORTHO05D006876 1.8e-07 58.9 71 47.9
Glyma.10G184900 Glycine max HOM05D005428 ORTHO05D006876 5.2e-07 57.4 71 49.3
Phvul.007G125750 Phaseolus vulgaris HOM05D005428 ORTHO05D006876 5.2e-07 57.4 71 49.3
VMungo0720G3093 Vigna mungo HOM05D005428 ORTHO05D006876 5.2e-07 57.4 71 49.3
AagrBONN_evm.TU.Sc2ySwM_228.2275 Anthoceros agrestis HOM05D005428 ORTHO05D006876 1.2e-06 56.2 71 50.7
Os12g0597500 Oryza sativa ssp. japonica HOM05D005428 ORTHO05D006876 1.2e-06 56.2 71 45.1
HPP92_018496 Vanilla planifolia HOM05D005428 ORTHO05D006876 2.6e-06 55.1 71 47.9
Zm00001eb030970 Zea mays HOM05D005428 ORTHO05D006876 4.4e-06 54.3 71 43.7


User provided reference genes

Program Settings