Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra08G0117000 Salix brachista HOM05D007425 ORTHO05D009334 9.8e-87 323.6 177 100.0
Potri.008G153400 Populus trichocarpa HOM05D007425 ORTHO05D009334 5.4e-77 291.2 177 90.4
Manes.03G178200 Manihot esculenta HOM05D007425 ORTHO05D009334 2.5e-34 149.4 177 55.9
CiPaw.01G166700 Carya illinoinensis HOM05D007425 ORTHO05D009334 8.1e-33 144.4 180 52.8
QL06p002223 Quercus lobata HOM05D007425 ORTHO05D009334 1.2e-31 140.6 177 53.1
RcHm_v2.0_Chr7g0190521 Rosa chinensis HOM05D007425 ORTHO05D009334 4.9e-30 135.2 148 60.8
COL.COLO4_21483 Corchorus olitorius HOM05D007425 ORTHO05D009334 6.4e-30 134.8 168 58.3
FAN13G1551 Fragaria x ananassa HOM05D007425 ORTHO05D009334 6.4e-30 134.8 152 57.9
Haze_00892 Corylus avellana HOM05D007425 ORTHO05D009334 1.9e-29 133.3 165 54.5
Atru.chr4.2458 Acer truncatum HOM05D007425 ORTHO05D009334 2.4e-29 132.9 172 52.3
Gorai.006G239600 Gossypium raimondii HOM05D007425 ORTHO05D009334 2.4e-29 132.9 183 55.2
Cfa015652 Carpinus fangiana HOM05D007425 ORTHO05D009334 4.2e-29 132.1 179 51.4
PGR142G3696 Punica granatum HOM05D007425 ORTHO05D009334 4.2e-29 132.1 180 54.4
Duzib212G0056 Durio zibethinus HOM05D007425 ORTHO05D009334 5.4e-29 131.7 162 56.8
TAR636G0682 Trochodendron aralioides HOM05D007425 ORTHO05D009334 5.4e-29 131.7 180 51.7
VMungo1215G1239 Vigna mungo HOM05D007425 ORTHO05D009334 7.1e-29 131.3 162 58.6
Cc03_g03840 Coffea canephora HOM05D007425 ORTHO05D009334 9.3e-29 131.0 185 51.9
Glyma.01G237800 Glycine max HOM05D007425 ORTHO05D009334 9.3e-29 131.0 154 55.2
Rhsim04G0201800 Rhododendron simsii HOM05D007425 ORTHO05D009334 9.3e-29 131.0 186 46.2
Prupe.1G014400 Prunus persica HOM05D007425 ORTHO05D009334 1.6e-28 130.2 174 49.4
Duzib151G0901 Durio zibethinus HOM05D007425 ORTHO05D009334 2.7e-28 129.4 176 53.4
Nn4g26476 Nelumbo nucifera HOM05D007425 ORTHO05D009334 3.5e-28 129.0 190 50.0
CSS0011351 Camellia sinensis var. sinensis HOM05D007425 ORTHO05D009334 4.6e-28 128.6 172 48.3
FAN04G2988 Fragaria x ananassa HOM05D007425 ORTHO05D009334 6.0e-28 128.3 145 57.9
Thecc.04G232500 Theobroma cacao HOM05D007425 ORTHO05D009334 6.0e-28 128.3 142 60.6
MD16G1194500 Malus domestica HOM05D007425 ORTHO05D009334 7.9e-28 127.9 171 51.5
Gohir.D09G218600 Gossypium hirsutum HOM05D007425 ORTHO05D009334 1.3e-27 127.1 186 53.8
MD13G1193800 Malus domestica HOM05D007425 ORTHO05D009334 1.3e-27 127.1 165 50.3
Dinv13997 Davidia involucrata HOM05D001000 ORTHO05D002976 1.8e-27 126.7 136 59.6
LjContig00408g0025154 Lotus japonicus HOM05D007425 ORTHO05D009334 2.3e-27 126.3 102 66.7
Gohir.A09G216200 Gossypium hirsutum HOM05D007425 ORTHO05D009334 3.0e-27 125.9 180 53.3
Eucgr.L02493 Eucalyptus grandis HOM05D007425 ORTHO05D009334 3.9e-27 125.6 150 54.0
SGA_v2.0_scaffold39G15229 Striga asiatica HOM05D007425 ORTHO05D009334 3.9e-27 125.6 164 51.2
Sed0025719 Sechium edule HOM05D007425 ORTHO05D009334 5.1e-27 125.2 176 46.6
Hma1.2p1_0275F.1_g110893 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 6.7e-27 124.8 118 61.9
Hma1.2p1_0275F.1_g110900 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 6.7e-27 124.8 118 61.9
Lsat_1_v5_gn_9_18440 Lactuca sativa HOM05D007425 ORTHO05D009334 6.7e-27 124.8 102 66.7
MSTRG.24738 Avicennia marina HOM05D007425 ORTHO05D009334 8.7e-27 124.4 185 47.0
Cpa.g.sc9.287 Carica papaya HOM05D007425 ORTHO05D009334 8.7e-27 124.4 178 48.3
Phvul.002G045100 Phaseolus vulgaris HOM05D007425 ORTHO05D009334 8.7e-27 124.4 167 52.1
HanXRQChr08g0229221 Helianthus annuus HOM05D007425 ORTHO05D009334 1.5e-26 123.6 85 77.6
Lj3P734T17 Lonicera japonica HOM05D007425 ORTHO05D009334 1.5e-26 123.6 175 49.7
Sopen09g030940 Solanum pennellii HOM05D007425 ORTHO05D009334 1.5e-26 123.6 165 50.3
FvH4_5g07900 Fragaria vesca HOM05D007425 ORTHO05D009334 1.9e-26 123.2 144 56.9
Oeu031224.1 Olea europaea HOM05D007425 ORTHO05D009334 1.9e-26 123.2 177 48.6
Oeu031227.1 Olea europaea HOM05D007425 ORTHO05D009334 1.9e-26 123.2 177 48.6
Oeu031228.1 Olea europaea HOM05D007425 ORTHO05D009334 1.9e-26 123.2 177 48.6
Eucgr.L01274 Eucalyptus grandis HOM05D007425 ORTHO05D009334 2.5e-26 122.9 152 53.9
MELO3C006532.2 Cucumis melo HOM05D007425 ORTHO05D009334 3.3e-26 122.5 182 47.8
Medtr5g038520 Medicago truncatula HOM05D007425 ORTHO05D009334 3.3e-26 122.5 176 48.9
Aa31LG9G2430 Aethionema arabicum HOM05D007425 ORTHO05D009334 4.3e-26 122.1 183 45.9
THA.LOC104822268 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 4.3e-26 122.1 185 48.6
CsaV3_3G013300 Cucumis sativus L. HOM05D007425 ORTHO05D009334 5.6e-26 121.7 180 48.3
Eucgr.B01085 Eucalyptus grandis HOM05D007425 ORTHO05D009334 9.6e-26 120.9 108 62.0
PGSC0003DMG400032277 Solanum tuberosum HOM05D007425 ORTHO05D009334 9.6e-26 120.9 94 69.1
BraA01t02180Z Brassica rapa HOM05D007425 ORTHO05D009334 1.6e-25 120.2 176 49.4
Psat2g124560 Pisum sativum HOM05D007425 ORTHO05D009334 1.6e-25 120.2 167 50.3
unitig_32.g10818 Utricularia gibba HOM05D007425 ORTHO05D009334 2.1e-25 119.8 121 61.2
CANSAT78G0262 Cannabis sativa HOM05D007425 ORTHO05D009334 3.7e-25 119.0 160 53.1
DCAR_002385 Daucus carota HOM05D007425 ORTHO05D009334 3.7e-25 119.0 176 50.0
BcaC09g50166 Brassica carinata HOM05D007425 ORTHO05D009334 4.8e-25 118.6 178 49.4
C01p28260 Brassica napus HOM05D007425 ORTHO05D009334 4.8e-25 118.6 178 49.4
BolC1t02755H Brassica oleracea HOM05D007425 ORTHO05D009334 4.8e-25 118.6 178 49.4
FAN18G2754 Fragaria x ananassa HOM05D007425 ORTHO05D009334 4.8e-25 118.6 172 50.6
PSO017G2433 Papaver somniferum HOM05D007425 ORTHO05D009334 4.8e-25 118.6 188 48.9
Sed0000110 Sechium edule HOM05D007425 ORTHO05D009334 1.1e-24 117.5 172 48.3
Nitab4.5_0004258g0010 Nicotiana tabacum HOM05D007425 ORTHO05D009334 1.4e-24 117.1 183 44.8
PSO170G1990 Papaver somniferum HOM05D007425 ORTHO05D009334 1.4e-24 117.1 184 49.5
THA.LOC104803027 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 1.8e-24 116.7 124 60.5
SalBow3G4464 Salvia bowleyana HOM05D007425 ORTHO05D009334 2.4e-24 116.3 130 57.7
Ah.14g089400 Amaranthus hybridus HOM05D007425 ORTHO05D009334 3.1e-24 115.9 176 47.7
EL10Ac3g06446 Beta vulgaris HOM05D007425 ORTHO05D009334 3.1e-24 115.9 162 48.1
CARHR221470 Cardamine hirsuta HOM05D007425 ORTHO05D009334 1.5e-23 113.6 172 47.1
Aqoxy7G02632 Aquilegia oxysepala HOM05D007425 ORTHO05D009334 2.0e-23 113.2 122 55.7
Sc13g0004450 Simmondsia chinensis HOM05D007425 ORTHO05D009334 2.0e-23 113.2 165 46.7
CAN.G490.15 Capsicum annuum HOM05D007425 ORTHO05D009334 2.6e-23 112.8 74 77.0
Ca_04746_v3 Cicer arietinum L. HOM05D007425 ORTHO05D009334 2.6e-23 112.8 76 77.6
ECA247G1832 Erigeron canadensis HOM05D007425 ORTHO05D009334 2.6e-23 112.8 92 66.3
Carub.0007s2724 Capsella rubella HOM05D007425 ORTHO05D009334 4.5e-23 112.1 87 70.1
BcaNung00324 Brassica carinata HOM05D007425 ORTHO05D009334 5.8e-23 111.7 189 46.0
AL7G40980 Arabidopsis lyrata HOM05D007425 ORTHO05D009334 7.6e-23 111.3 179 44.7
arahy.Tifrunner.gnm1.ann1.CGGZ98 Arachis hypogaea HOM05D007425 ORTHO05D009334 1.0e-22 110.9 179 46.9
AUR62033636 Chenopodium quinoa HOM05D007425 ORTHO05D009334 1.0e-22 110.9 174 46.0
Migut.G00341 Erythranthe guttata HOM05D007425 ORTHO05D009334 1.0e-22 110.9 172 48.3
Sp7g13010 Schrenkiella parvula HOM05D007425 ORTHO05D009334 1.0e-22 110.9 186 45.2
CDE04G2079 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 8.4e-22 107.8 93 61.3
AT4G14870 Arabidopsis thaliana HOM05D007425 ORTHO05D009334 1.1e-21 107.5 178 46.1
TAR636G0596 Trochodendron aralioides HOM05D007425 ORTHO05D009334 4.2e-21 105.5 67 76.1
Ciclev10006055m.g Citrus clementina HOM05D007425 ORTHO05D009334 5.5e-21 105.1 174 44.8
Nitab4.5_0000043g0080 Nicotiana tabacum HOM05D007425 ORTHO05D009334 9.3e-21 104.4 179 45.3
MBI16_g00841_MAGBIO Magnolia biondii HOM05D007425 ORTHO05D009334 3.5e-20 102.4 184 46.7
Zm00001eb375110 Zea mays HOM05D007425 ORTHO05D009334 6.0e-20 101.7 186 43.0
Thhalv10026366m.g Eutrema salsugineum HOM05D007425 ORTHO05D009334 2.3e-19 99.8 182 44.5
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 3.0e-19 99.4 83 67.5
Lalb_Chr05g0211001 Lupinus albus HOM05D007425 ORTHO05D009334 6.7e-19 98.2 86 62.8
ATR0626G045 Amborella trichopoda HOM05D007425 ORTHO05D009334 4.3e-18 95.5 181 40.9
HPP92_010419 Vanilla planifolia HOM05D007425 ORTHO05D009334 3.7e-17 92.4 150 40.7
Os04g0306750 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 1.8e-16 90.1 60 73.3
SEGI_06187 Sequoiadendron giganteum HOM05D007425 ORTHO05D009334 9.0e-16 87.8 65 67.7
Pp3c2_27330 Physcomitrium patens HOM05D007425 ORTHO05D009334 1.7e-14 83.6 92 48.9
AUR62034746 Chenopodium quinoa HOM05D007425 ORTHO05D009334 3.9e-11 72.4 148 38.5
Mapoly0070s0085 Marchantia polymorpha HOM05D007425 ORTHO05D009334 8.7e-11 71.2 96 43.8
Os08g0399050 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 8.7e-11 71.2 73 53.4
CDE07G0184 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 9.7e-10 67.8 95 46.3
CBR_g18894 Chara braunii HOM05D007425 ORTHO05D009334 3.1e-08 62.8 114 36.8
SMO358G0357 Selaginella moellendorffii HOM05D013303 ORTHO05D015288 4.1e-08 62.4 155 36.1


User provided reference genes

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