Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra08G0116400 Salix brachista HOM05D007072 ORTHO05D008841 3.8e-126 454.9 238 100.0
Potri.008G152800 Populus trichocarpa HOM05D007072 ORTHO05D008841 1.0e-91 340.5 238 79.4
Manes.03G178700 Manihot esculenta HOM05D007072 ORTHO05D008841 1.9e-69 266.5 238 65.1
Haze_00902 Corylus avellana HOM05D007072 ORTHO05D008841 1.3e-65 253.8 239 62.3
Haze_03895 Corylus avellana HOM05D007072 ORTHO05D008841 3.5e-63 245.7 239 61.1
CSS0014065 Camellia sinensis var. sinensis HOM05D007072 ORTHO05D008841 7.8e-63 244.6 239 59.0
Prupe.1G013400 Prunus persica HOM05D007072 ORTHO05D008841 1.7e-62 243.4 236 60.6
MD16G1193700 Malus domestica HOM05D007072 ORTHO05D008841 5.0e-62 241.9 237 59.9
QL06p002505 Quercus lobata HOM05D007072 ORTHO05D008841 5.0e-62 241.9 235 60.4
Dinv13993 Davidia involucrata HOM05D007072 ORTHO05D008841 1.1e-61 240.7 239 59.4
GSVIVG01017974001 Vitis vinifera HOM05D007072 ORTHO05D008841 7.3e-61 238.0 239 61.5
CiPaw.01G165800 Carya illinoinensis HOM05D007072 ORTHO05D008841 2.1e-60 236.5 241 58.5
Thecc.04G231900 Theobroma cacao HOM05D007072 ORTHO05D008841 6.1e-60 235.0 239 58.2
Atru.ctg752_3.79 Acer truncatum HOM05D007072 ORTHO05D008841 1.0e-59 234.2 222 59.9
Duzib212G0309 Durio zibethinus HOM05D007072 ORTHO05D008841 1.4e-59 233.8 238 57.6
PGR142G1968 Punica granatum HOM05D007072 ORTHO05D008841 5.8e-58 228.4 239 56.5
Glyma.07G018200 Glycine max HOM05D007072 ORTHO05D008841 2.9e-57 226.1 239 56.5
Glyma.08G203200 Glycine max HOM05D007072 ORTHO05D008841 1.4e-56 223.8 238 55.5
Lj3A735T48 Lonicera japonica HOM05D007072 ORTHO05D008841 2.4e-56 223.0 231 59.3
Actinidia40146 Actinidia chinensis HOM05D007072 ORTHO05D008841 4.1e-56 222.2 210 61.9
arahy.Tifrunner.gnm1.ann1.DZ7G8Z Arachis hypogaea HOM05D007072 ORTHO05D008841 4.1e-56 222.2 232 56.0
Phvul.007G057300 Phaseolus vulgaris HOM05D007072 ORTHO05D008841 9.2e-56 221.1 238 55.5
ClCG06G006220 Citrullus lanatus HOM05D007072 ORTHO05D008841 1.2e-55 220.7 238 54.6
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 1.2e-55 220.7 211 61.1
CANSAT78G1446 Cannabis sativa HOM05D007072 ORTHO05D008841 2.0e-55 219.9 206 61.7
Nn4g26321 Nelumbo nucifera HOM05D007072 ORTHO05D008841 2.0e-55 219.9 240 57.1
RcHm_v2.0_Chr4g0416241 Rosa chinensis HOM05D007072 ORTHO05D008841 2.0e-55 219.9 237 54.9
Ca_10901_v3 Cicer arietinum L. HOM05D007072 ORTHO05D008841 6.0e-55 218.4 238 55.5
COL.COLO4_04736 Corchorus olitorius HOM05D007072 ORTHO05D008841 6.0e-55 218.4 240 54.6
arahy.Tifrunner.gnm1.ann1.KKZ0LN Arachis hypogaea HOM05D007072 ORTHO05D008841 1.7e-54 216.9 238 53.4
arahy.Tifrunner.gnm1.ann1.0J3LZT Arachis hypogaea HOM05D007072 ORTHO05D008841 2.3e-54 216.5 238 52.9
Hma1.2p1_1344F.1_g277130 Hydrangea macrophylla HOM05D007072 ORTHO05D008841 2.3e-54 216.5 239 55.2
TAR636G0958 Trochodendron aralioides HOM05D007072 ORTHO05D008841 2.3e-54 216.5 232 56.5
VMungo0720G2696 Vigna mungo HOM05D007072 ORTHO05D008841 3.0e-54 216.1 238 55.0
DCAR_030636 Daucus carota HOM05D007072 ORTHO05D008841 3.9e-54 215.7 214 60.3
Rhsim04G0202300 Rhododendron simsii HOM05D007072 ORTHO05D008841 3.9e-54 215.7 220 58.2
arahy.Tifrunner.gnm1.ann1.8ZA7N6 Arachis hypogaea HOM05D007072 ORTHO05D008841 5.0e-54 215.3 238 53.8
Gohir.A10G168700 Gossypium hirsutum HOM05D007072 ORTHO05D008841 5.0e-54 215.3 241 54.4
Lj5g0010864 Lotus japonicus HOM05D007072 ORTHO05D008841 5.0e-54 215.3 239 55.2
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 1.1e-53 214.2 241 53.9
TWI09G0189 Tripterygium wilfordii HOM05D007072 ORTHO05D008841 1.1e-53 214.2 239 56.9
Migut.G00337 Erythranthe guttata HOM05D007072 ORTHO05D008841 4.3e-53 212.2 239 54.4
Gohir.D10G174900 Gossypium hirsutum HOM05D007072 ORTHO05D008841 4.3e-53 212.2 241 53.9
Eucgr.L01273 Eucalyptus grandis HOM05D007072 ORTHO05D008841 5.6e-53 211.8 237 52.3
MELO3C012648.2 Cucumis melo HOM05D007072 ORTHO05D008841 9.5e-53 211.1 238 54.6
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 2.1e-52 209.9 238 54.2
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 2.1e-52 209.9 238 54.2
CsaV3_7G022520 Cucumis sativus L. HOM05D007072 ORTHO05D008841 2.8e-52 209.5 238 54.2
Aqoxy5G00468 Aquilegia oxysepala HOM05D007072 ORTHO05D008841 3.6e-52 209.1 230 56.1
Medtr1g103810 Medicago truncatula HOM05D007072 ORTHO05D008841 4.7e-52 208.8 238 54.2
Eucgr.L02492 Eucalyptus grandis HOM05D007072 ORTHO05D008841 6.2e-52 208.4 237 51.9
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 1.4e-51 207.2 238 53.8
SalBow2G0955 Salvia bowleyana HOM05D007072 ORTHO05D008841 1.4e-51 207.2 236 53.8
Psat6g207520 Pisum sativum HOM05D007072 ORTHO05D008841 3.1e-51 206.1 240 54.2
TPR.G5523 Trifolium pratense HOM05D007072 ORTHO05D008841 4.0e-51 205.7 241 53.9
Nitab4.5_0000043g0120 Nicotiana tabacum HOM05D007072 ORTHO05D008841 8.9e-51 204.5 208 58.2
PGSC0003DMG400030078 Solanum tuberosum HOM05D007072 ORTHO05D008841 2.6e-50 203.0 239 53.1
Peaxi162Scf00092g01012 Petunia axillaris HOM05D007072 ORTHO05D008841 3.4e-50 202.6 211 57.8
Sopen09g030860 Solanum pennellii HOM05D007072 ORTHO05D008841 5.8e-50 201.8 214 57.5
Cc03_g03760 Coffea canephora HOM05D007072 ORTHO05D008841 9.8e-50 201.1 218 54.6
Solyc09g076030.4 Solanum lycopersicum HOM05D007072 ORTHO05D008841 9.8e-50 201.1 214 57.5
CAN.G490.4 Capsicum annuum HOM05D007072 ORTHO05D008841 2.2e-49 199.9 214 57.0
ECA240G2950 Erigeron canadensis HOM05D007072 ORTHO05D008841 4.9e-49 198.7 215 54.9
Oeu031231.1 Olea europaea HOM05D007072 ORTHO05D008841 6.4e-49 198.4 201 59.7
THA.LOC104800963 Tarenaya hassleriana HOM05D007072 ORTHO05D008841 8.3e-49 198.0 243 49.0
HanXRQChr03g0062521 Helianthus annuus HOM05D007072 ORTHO05D008841 1.9e-48 196.8 214 54.7
PSO732G0121 Papaver somniferum HOM05D007072 ORTHO05D008841 3.5e-47 192.6 221 51.1
Sed0002009 Sechium edule HOM05D007072 ORTHO05D008841 3.5e-47 192.6 210 54.8
Sc19g0004160 Simmondsia chinensis HOM05D007072 ORTHO05D008841 7.8e-47 191.4 217 52.5
Hund12130 Selenicereus undatus HOM05D007072 ORTHO05D008841 1.3e-46 190.7 191 56.5
BraA10t42680Z Brassica rapa HOM05D007072 ORTHO05D008841 2.3e-46 189.9 158 64.6
Lalb_Chr02g0140581 Lupinus albus HOM05D007072 ORTHO05D008841 3.9e-46 189.1 172 61.0
Aa31LG1G19230 Aethionema arabicum HOM05D007072 ORTHO05D008841 6.6e-46 188.3 211 53.6
ATR0733G024 Amborella trichopoda HOM05D007072 ORTHO05D008841 6.6e-46 188.3 208 53.8
BolC5t29149H Brassica oleracea HOM05D007072 ORTHO05D008841 6.6e-46 188.3 158 63.9
C05p03740 Brassica napus HOM05D007072 ORTHO05D008841 8.6e-46 188.0 158 63.9
A10p04090 Brassica napus HOM05D007072 ORTHO05D008841 1.9e-45 186.8 158 63.9
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 1.9e-45 186.8 183 59.6
PSO675G2050 Papaver somniferum HOM05D007072 ORTHO05D008841 1.9e-45 186.8 218 50.5
BcaB02g06864 Brassica carinata HOM05D007072 ORTHO05D008841 4.3e-45 185.7 213 55.4
AT1G05385 Arabidopsis thaliana HOM05D007072 ORTHO05D008841 5.6e-45 185.3 188 57.4
Sp1g04270 Schrenkiella parvula HOM05D007072 ORTHO05D008841 5.6e-45 185.3 212 53.3
Carub.0001s0473 Capsella rubella HOM05D007072 ORTHO05D008841 7.3e-45 184.9 224 51.3
Lsat_1_v5_gn_7_66201 Lactuca sativa HOM05D007072 ORTHO05D008841 7.3e-45 184.9 193 57.5
Thhalv10008840m.g Eutrema salsugineum HOM05D007072 ORTHO05D008841 9.5e-45 184.5 212 53.8
AL1G15220 Arabidopsis lyrata HOM05D007072 ORTHO05D008841 2.1e-44 183.3 169 60.9
Rhsim04G0202400 Rhododendron simsii HOM05D007072 ORTHO05D008841 1.1e-43 181.0 162 59.9
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 1.1e-43 181.0 193 54.9
Actinidia27161 Actinidia chinensis HOM05D007072 ORTHO05D008841 1.4e-43 180.6 194 57.2
Ah.04g154560 Amaranthus hybridus HOM05D007072 ORTHO05D008841 1.4e-43 180.6 162 61.7
SGA_v2.0_scaffold124G33503 Striga asiatica HOM05D007072 ORTHO05D008841 2.0e-42 176.8 223 51.1
CARHR004900 Cardamine hirsuta HOM05D007072 ORTHO05D008841 5.8e-42 175.3 201 52.2
AUR62034750 Chenopodium quinoa HOM05D007072 ORTHO05D008841 7.5e-42 174.9 191 52.4
AUR62033624 Chenopodium quinoa HOM05D007072 ORTHO05D008841 2.2e-41 173.3 166 57.8
EL10Ac2g03959 Beta vulgaris HOM05D007072 ORTHO05D008841 6.4e-41 171.8 191 52.9
EL10Ac4g08230 Beta vulgaris HOM05D007072 ORTHO05D008841 1.9e-40 170.2 191 52.4
Os03g0747700 Oryza sativa ssp. japonica HOM05D007072 ORTHO05D008841 3.0e-38 162.9 169 58.6
Zm00001eb214960 Zea mays HOM05D007072 ORTHO05D008841 4.3e-37 159.1 185 52.4
HPP92_001955 Vanilla planifolia HOM05D007072 ORTHO05D008841 9.5e-37 157.9 220 45.0
Nitab4.5_0001560g0030 Nicotiana tabacum HOM05D007072 ORTHO05D008841 2.2e-33 146.7 135 60.7
Pp3c8_18010 Physcomitrium patens HOM05D007072 ORTHO05D008841 4.6e-31 139.0 203 40.9
CDE10G0502 Ceratophyllum demersum HOM05D007072 ORTHO05D008841 1.2e-28 131.0 128 57.0
Mapoly0045s0091 Marchantia polymorpha HOM05D007072 ORTHO05D008841 1.6e-28 130.6 226 39.8
SMO347G0486 Selaginella moellendorffii HOM05D007072 ORTHO05D008841 4.4e-26 122.5 164 43.3
SEGI_01006 Sequoiadendron giganteum HOM05D007072 ORTHO05D008841 2.9e-25 119.8 101 61.4
RcHm_v2.0_Chr4g0430981 Rosa chinensis HOM05D007072 ORTHO05D008841 8.4e-25 118.2 120 58.3
CBR_g41625 Chara braunii HOM05D007072 ORTHO05D008841 3.9e-22 109.4 161 37.9
MBI05_g43294_MAGBIO Magnolia biondii HOM05D007072 ORTHO05D008841 4.9e-17 92.4 97 55.7
AagrBONN_evm.TU.Sc2ySwM_228.1232 Anthoceros agrestis HOM05D007072 ORTHO05D008841 1.0e-14 84.7 151 37.7


User provided reference genes

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