Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra08G0098500 Salix brachista HOM05D005599 ORTHO05D006921 1.1e-66 256.5 127 100.0
Potri.008G129900 Populus trichocarpa HOM05D005599 ORTHO05D006921 4.9e-56 221.1 108 98.1
Sabra10G0082600 Salix brachista HOM05D005599 ORTHO05D006921 1.3e-53 213.0 114 88.6
Potri.010G112300 Populus trichocarpa HOM05D005599 ORTHO05D006921 5.6e-52 207.6 107 93.5
Manes.15G128100 Manihot esculenta HOM05D005599 ORTHO05D006921 5.2e-50 201.1 106 87.7
Atru.chr11.497 Acer truncatum HOM05D005599 ORTHO05D006921 1.5e-49 199.5 103 88.3
Cpa.g.sc65.146 Carica papaya HOM05D005599 ORTHO05D006921 2.0e-49 199.1 122 78.7
Thecc.02G282300 Theobroma cacao HOM05D005599 ORTHO05D006921 2.6e-49 198.7 108 86.1
Haze_10995 Corylus avellana HOM05D005599 ORTHO05D006921 3.4e-49 198.4 123 75.6
Duzib251G0393 Durio zibethinus HOM05D005599 ORTHO05D006921 3.4e-49 198.4 104 87.5
CiPaw.06G011400 Carya illinoinensis HOM05D005599 ORTHO05D006921 4.4e-49 198.0 106 84.9
COL.COLO4_20491 Corchorus olitorius HOM05D005599 ORTHO05D006921 5.8e-49 197.6 109 86.2
Gorai.005G161400 Gossypium raimondii HOM05D005599 ORTHO05D006921 7.6e-49 197.2 115 80.0
TWI79G1349 Tripterygium wilfordii HOM05D005599 ORTHO05D006921 7.6e-49 197.2 107 86.0
Ciclev10017195m.g Citrus clementina HOM05D005599 ORTHO05D006921 1.3e-48 196.4 106 85.8
QL01p001565 Quercus lobata HOM05D005599 ORTHO05D006921 1.7e-48 196.1 106 84.9
Sc14g0007100 Simmondsia chinensis HOM05D005599 ORTHO05D006921 1.7e-48 196.1 106 84.9
arahy.Tifrunner.gnm1.ann1.UU8CC3 Arachis hypogaea HOM05D005599 ORTHO05D006921 4.9e-48 194.5 110 80.9
CSS0001207 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 4.9e-48 194.5 119 76.5
ClCG07G006660 Citrullus lanatus HOM05D005599 ORTHO05D006921 1.1e-47 193.4 106 84.9
FvH4_4g19980 Fragaria vesca HOM05D005599 ORTHO05D006921 1.1e-47 193.4 107 82.2
FAN05G3069 Fragaria x ananassa HOM05D005599 ORTHO05D006921 1.1e-47 193.4 107 82.2
FAN12G4015 Fragaria x ananassa HOM05D005599 ORTHO05D006921 1.1e-47 193.4 107 82.2
FAN25G3147 Fragaria x ananassa HOM05D005599 ORTHO05D006921 1.1e-47 193.4 107 82.2
RcHm_v2.0_Chr4g0425701 Rosa chinensis HOM05D005599 ORTHO05D006921 1.1e-47 193.4 107 82.2
arahy.Tifrunner.gnm1.ann1.5G098T Arachis hypogaea HOM05D005599 ORTHO05D006921 1.4e-47 193.0 109 80.7
Prupe.1G325600 Prunus persica HOM05D005599 ORTHO05D006921 2.4e-47 192.2 107 82.2
Gohir.A03G120800 Gossypium hirsutum HOM05D005599 ORTHO05D006921 3.2e-47 191.8 108 82.4
Hund09673 Selenicereus undatus HOM05D005599 ORTHO05D006921 3.2e-47 191.8 106 84.0
GSVIVG01011752001 Vitis vinifera HOM05D005599 ORTHO05D006921 3.2e-47 191.8 106 82.1
Rhsim09G0066400 Rhododendron simsii HOM05D005599 ORTHO05D006921 4.2e-47 191.4 107 82.2
Cc11_g08600 Coffea canephora HOM05D005599 ORTHO05D006921 5.4e-47 191.0 106 81.1
CsaV3_5G013870 Cucumis sativus L. HOM05D005599 ORTHO05D006921 7.1e-47 190.7 106 83.0
FAN07G1516 Fragaria x ananassa HOM05D005599 ORTHO05D006921 7.1e-47 190.7 107 81.3
AUR62042684 Chenopodium quinoa HOM05D005599 ORTHO05D006921 9.3e-47 190.3 107 82.2
Sed0017153 Sechium edule HOM05D005599 ORTHO05D006921 9.3e-47 190.3 107 82.2
Lj6g0000510 Lotus japonicus HOM05D005599 ORTHO05D006921 1.6e-46 189.5 106 81.1
THA.LOC104823847 Tarenaya hassleriana HOM05D005599 ORTHO05D006921 1.6e-46 189.5 106 81.1
vmacro00414 Vaccinium macrocarpon HOM05D005599 ORTHO05D006921 1.6e-46 189.5 107 83.2
Gohir.D02G144100 Gossypium hirsutum HOM05D005599 ORTHO05D006921 2.1e-46 189.1 108 81.5
arahy.Tifrunner.gnm1.ann1.5FG4B2 Arachis hypogaea HOM05D005599 ORTHO05D006921 2.7e-46 188.7 105 81.0
EL10Ac9g21851 Beta vulgaris HOM05D005599 ORTHO05D006921 2.7e-46 188.7 107 81.3
AUR62032768 Chenopodium quinoa HOM05D005599 ORTHO05D006921 2.7e-46 188.7 107 81.3
Oeu003383.1 Olea europaea HOM05D005599 ORTHO05D006921 7.8e-46 187.2 109 78.9
vmacro14440 Vaccinium macrocarpon HOM05D005599 ORTHO05D006921 7.8e-46 187.2 107 81.3
BolC8t52072H Brassica oleracea HOM05D005599 ORTHO05D006921 1.3e-45 186.4 124 71.8
Aqoxy1G03319 Aquilegia oxysepala HOM05D005599 ORTHO05D006921 1.7e-45 186.0 117 76.1
Glyma.16G057902 Glycine max HOM05D005599 ORTHO05D006921 1.7e-45 186.0 106 79.2
Solyc04g007700.3 Solanum lycopersicum HOM05D005599 ORTHO05D006921 1.7e-45 186.0 108 76.9
Sopen04g002790 Solanum pennellii HOM05D005599 ORTHO05D006921 1.7e-45 186.0 108 76.9
CSS0007655 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 2.3e-45 185.7 107 82.2
CSS0037826 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 2.3e-45 185.7 107 82.2
Cfa008617 Carpinus fangiana HOM05D005599 ORTHO05D006921 3.0e-45 185.3 107 78.5
MELO3C018308.2 Cucumis melo HOM05D005599 ORTHO05D006921 3.0e-45 185.3 106 81.1
MD16G1027400 Malus domestica HOM05D005599 ORTHO05D006921 3.0e-45 185.3 106 80.2
PGSC0003DMG400005984 Solanum tuberosum HOM05D005599 ORTHO05D006921 3.0e-45 185.3 107 77.6
Aa31LG2G8490 Aethionema arabicum HOM05D005599 ORTHO05D006921 3.9e-45 184.9 107 79.4
Oeu045860.1 Olea europaea HOM05D005599 ORTHO05D006921 3.9e-45 184.9 110 78.2
Dinv14427 Davidia involucrata HOM05D005599 ORTHO05D006921 5.1e-45 184.5 113 77.0
Glyma.19G089600 Glycine max HOM05D005599 ORTHO05D006921 5.1e-45 184.5 107 78.5
Phvul.001G094900 Phaseolus vulgaris HOM05D005599 ORTHO05D006921 5.1e-45 184.5 106 78.3
Ah.04g163140 Amaranthus hybridus HOM05D005599 ORTHO05D006921 6.6e-45 184.1 106 80.2
MBI16_g23758_MAGBIO Magnolia biondii HOM05D005599 ORTHO05D006921 6.6e-45 184.1 107 78.5
Peaxi162Scf00253g01125 Petunia axillaris HOM05D005599 ORTHO05D006921 8.7e-45 183.7 106 79.2
MD13G1024900 Malus domestica HOM05D005599 ORTHO05D006921 1.1e-44 183.3 106 78.3
CAN.G1244.3 Capsicum annuum HOM05D005599 ORTHO05D006921 1.9e-44 182.6 107 77.6
Lalb_Chr08g0237401 Lupinus albus HOM05D005599 ORTHO05D006921 1.9e-44 182.6 106 79.2
unitig_899.g15269 Utricularia gibba HOM05D005599 ORTHO05D006921 1.9e-44 182.6 104 77.9
BraA09t41538Z Brassica rapa HOM05D005599 ORTHO05D006921 2.5e-44 182.2 112 75.0
Hma1.2p1_0096F.1_g047800 Hydrangea macrophylla HOM05D005599 ORTHO05D006921 2.5e-44 182.2 113 75.2
Eucgr.B01298 Eucalyptus grandis HOM05D005599 ORTHO05D006921 3.3e-44 181.8 106 78.3
PGR004G1422 Punica granatum HOM05D005599 ORTHO05D006921 3.3e-44 181.8 107 77.6
Nitab4.5_0000426g0280 Nicotiana tabacum HOM05D005599 ORTHO05D006921 4.3e-44 181.4 114 73.7
Nitab4.5_0004230g0050 Nicotiana tabacum HOM05D005599 ORTHO05D006921 4.3e-44 181.4 114 73.7
DCAR_023596 Daucus carota HOM05D005599 ORTHO05D006921 5.6e-44 181.0 113 71.7
PSO170G3715 Papaver somniferum HOM05D005599 ORTHO05D006921 5.6e-44 181.0 106 78.3
PSO782G0484 Papaver somniferum HOM05D005599 ORTHO05D006921 5.6e-44 181.0 113 75.2
ATR0796G095 Amborella trichopoda HOM05D005599 ORTHO05D006921 1.3e-43 179.9 106 78.3
DCAR_026778 Daucus carota HOM05D005599 ORTHO05D006921 1.3e-43 179.9 113 71.7
HPP92_003868 Vanilla planifolia HOM05D005599 ORTHO05D006921 1.3e-43 179.9 106 79.2
HPP92_003899 Vanilla planifolia HOM05D005599 ORTHO05D006921 1.3e-43 179.9 106 79.2
Aqoxy3G01068 Aquilegia oxysepala HOM05D005599 ORTHO05D006921 1.6e-43 179.5 104 77.9
BraA06t24281Z Brassica rapa HOM05D005599 ORTHO05D006921 1.6e-43 179.5 112 74.1
TAR622G1178 Trochodendron aralioides HOM05D005599 ORTHO05D006921 1.6e-43 179.5 106 76.4
SGA_v2.0_scaffold181G39695 Striga asiatica HOM05D005599 ORTHO05D006921 2.8e-43 178.7 107 76.6
Ca_21512_v3 Cicer arietinum L. HOM05D005599 ORTHO05D006921 3.6e-43 178.3 108 75.0
RcHm_v2.0_Chr4g0441361 Rosa chinensis HOM05D005599 ORTHO05D006921 3.6e-43 178.3 114 73.7
VMungo0464G0261 Vigna mungo HOM05D005599 ORTHO05D006921 3.6e-43 178.3 106 76.4
AT1G14990 Arabidopsis thaliana HOM05D005599 ORTHO05D006921 4.8e-43 177.9 106 75.5
Carub.0001s1476 Capsella rubella HOM05D005599 ORTHO05D006921 4.8e-43 177.9 106 76.4
Thhalv10009435m.g Eutrema salsugineum HOM05D005599 ORTHO05D006921 4.8e-43 177.9 106 76.4
Os01g0606050 Oryza sativa ssp. japonica HOM05D005599 ORTHO05D006921 6.2e-43 177.6 99 79.8
SGA_v2.0_scaffold154G37132 Striga asiatica HOM05D005599 ORTHO05D006921 6.2e-43 177.6 107 75.7
HanXRQChr12g0364441 Helianthus annuus HOM05D005599 ORTHO05D006921 8.1e-43 177.2 107 77.6
Lsat_1_v5_gn_9_79661 Lactuca sativa HOM05D005599 ORTHO05D006921 8.1e-43 177.2 107 76.6
Sp1g13380 Schrenkiella parvula HOM05D005599 ORTHO05D006921 8.1e-43 177.2 106 76.4
CDE07G0704 Ceratophyllum demersum HOM05D005599 ORTHO05D006921 1.1e-42 176.8 106 75.5
A09p61660 Brassica napus HOM05D005599 ORTHO05D006921 1.4e-42 176.4 108 75.0
C08p45240 Brassica napus HOM05D005599 ORTHO05D006921 1.4e-42 176.4 109 75.2
TPR.G19139 Trifolium pratense HOM05D005599 ORTHO05D006921 1.4e-42 176.4 106 76.4
ECA236G1659 Erigeron canadensis HOM05D005599 ORTHO05D006921 1.8e-42 176.0 107 76.6
HanXRQChr08g0212121 Helianthus annuus HOM05D005599 ORTHO05D006921 1.8e-42 176.0 107 77.6
BcaB02g06563 Brassica carinata HOM05D005599 ORTHO05D006921 3.1e-42 175.3 106 75.5
CARHR015530 Cardamine hirsuta HOM05D005599 ORTHO05D006921 3.1e-42 175.3 106 74.5
Medtr1g069405 Medicago truncatula HOM05D005599 ORTHO05D006921 3.1e-42 175.3 106 75.5
AL1G27050 Arabidopsis lyrata HOM05D005599 ORTHO05D006921 4.0e-42 174.9 106 74.5
MSTRG.6631 Avicennia marina HOM05D005599 ORTHO05D006921 4.0e-42 174.9 107 74.8
A06p11010 Brassica napus HOM05D005599 ORTHO05D006921 4.0e-42 174.9 106 75.5
Zm00001eb161570 Zea mays HOM05D005599 ORTHO05D006921 4.0e-42 174.9 99 77.8
CANSAT11G1373 Cannabis sativa HOM05D005599 ORTHO05D006921 5.3e-42 174.5 106 74.5
Sed0011013 Sechium edule HOM05D005599 ORTHO05D006921 1.2e-41 173.3 101 77.2
BolC5t30050H Brassica oleracea HOM05D005599 ORTHO05D006921 2.6e-41 172.2 104 76.0
Psat6g049960 Pisum sativum HOM05D005599 ORTHO05D006921 2.6e-41 172.2 106 75.5
BcaC07g38244 Brassica carinata HOM05D005599 ORTHO05D006921 2.2e-40 169.1 112 71.4
C08p09930 Brassica napus HOM05D005599 ORTHO05D006921 2.2e-40 169.1 112 71.4
BolC8t48670H Brassica oleracea HOM05D005599 ORTHO05D006921 2.2e-40 169.1 112 71.4
Dinv07654 Davidia involucrata HOM05D005599 ORTHO05D006921 3.2e-39 165.2 95 80.0
C05p13060 Brassica napus HOM05D005599 ORTHO05D006921 6.0e-38 161.0 114 67.5
SGA_v2.0_scaffold6G03128 Striga asiatica HOM05D005599 ORTHO05D006921 5.1e-37 157.9 108 69.4
Eucgr.E01608 Eucalyptus grandis HOM05D005599 ORTHO05D006921 4.8e-35 151.4 107 69.2
SEGI_33740 Sequoiadendron giganteum HOM05D005599 ORTHO05D006921 6.2e-35 151.0 100 69.0
Migut.M00054 Erythranthe guttata HOM05D005599 ORTHO05D006921 1.1e-34 150.2 106 71.7
AUR62014127 Chenopodium quinoa HOM05D005599 ORTHO05D006921 2.1e-30 136.0 68 89.7
arahy.Tifrunner.gnm1.ann1.XM49AS Arachis hypogaea HOM05D005599 ORTHO05D006921 4.6e-30 134.8 69 87.0
Eucgr.B02904 Eucalyptus grandis HOM05D005599 ORTHO05D006921 1.3e-29 133.3 95 66.3
SGA_v2.0_scaffold2G00929 Striga asiatica HOM05D005599 ORTHO05D006921 3.4e-25 118.6 66 81.8
Pp3c16_10100 Physcomitrium patens HOM05D005599 ORTHO05D006921 1.0e-24 117.1 97 53.6
Mapoly0035s0140 Marchantia polymorpha HOM05D005599 ORTHO05D006921 1.4e-23 113.2 98 55.1
MBI16_g23757_MAGBIO Magnolia biondii HOM05D005599 ORTHO05D006921 1.1e-20 103.6 69 68.1
BcaC05g25431 Brassica carinata HOM05D005599 ORTHO05D006921 1.9e-20 102.8 106 50.9
MBI16_g23756_MAGBIO Magnolia biondii HOM05D000079 ORTHO05D016475 1.3e-19 100.1 70 65.7
Nn4g24251 Nelumbo nucifera HOM05D005599 ORTHO05D006921 3.7e-19 98.6 57 77.2
CBR_g40805 Chara braunii HOM05D005599 ORTHO05D006921 4.2e-15 85.1 91 47.3
DCAR_032107 Daucus carota HOM05D005599 ORTHO05D006921 2.7e-14 82.4 53 64.2
SGA_v2.0_scaffold135G34854 Striga asiatica HOM05D005599 ORTHO05D006921 6.1e-14 81.3 46 76.1
QL08p008929 Quercus lobata HOM05D005599 ORTHO05D006921 1.2e-09 67.0 43 76.7
FAN02G4440 Fragaria x ananassa HOM05D012050 ORTHO05D011158 3.6e-06 55.5 27 85.2


User provided reference genes

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