Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra08G0086100 Salix brachista HOM05D018804 ORTHO05D013371 9.0e-122 440.3 222 100.0
Potri.008G113800 Populus trichocarpa HOM05D018804 ORTHO05D013371 8.6e-56 221.1 139 84.9
Sabra10G0103600 Salix brachista HOM05D018804 ORTHO05D013371 5.0e-40 168.7 163 63.2
Potri.010G134800 Populus trichocarpa HOM05D018804 ORTHO05D013371 3.1e-37 159.5 147 65.3
Manes.14G093100 Manihot esculenta HOM05D018804 ORTHO05D014734 6.0e-25 118.6 153 51.6
Atru.chr11.1516 Acer truncatum HOM05D018013 ORTHO05D013371 4.5e-12 75.9 154 41.6
Oeu054579.1 Olea europaea HOM05D011353 ORTHO05D009956 1.1e-10 71.2 98 52.0
Cpa.g.sc53.8 Carica papaya HOM05D017299 ORTHO05D013371 1.9e-10 70.5 150 45.3
Thecc.02G317900 Theobroma cacao HOM05D018013 ORTHO05D013371 5.4e-10 68.9 138 41.3
COL.COLO4_27749 Corchorus olitorius HOM05D018013 ORTHO05D013371 1.2e-09 67.8 154 38.3
Aqoxy3G03789 Aquilegia oxysepala HOM05D018804 ORTHO05D009802 6.0e-09 65.5 129 40.3
Cc11_g11230 Coffea canephora HOM05D011353 ORTHO05D009956 2.3e-08 63.5 116 40.5
Nitab4.5_0005310g0050 Nicotiana tabacum HOM05D011353 ORTHO05D014734 2.3e-08 63.5 120 41.7
Lj2g0023718 Lotus japonicus HOM05D018202 ORTHO05D020778 3.0e-08 63.2 143 39.9
Cfa008825 Carpinus fangiana HOM05D017299 ORTHO05D013371 6.7e-08 62.0 135 43.7
QL03p047692 Quercus lobata HOM05D017299 ORTHO05D013371 8.7e-08 61.6 143 39.2
Nn3g17602 Nelumbo nucifera HOM05D008563 ORTHO05D009802 1.9e-07 60.5 148 37.2
CSS0028308 Camellia sinensis var. sinensis HOM05D018052 ORTHO05D009802 3.3e-07 59.7 124 40.3
Duzib268G0584 Durio zibethinus HOM05D018013 ORTHO05D013371 4.3e-07 59.3 140 37.9
CAN.G184.15 Capsicum annuum HOM05D011353 ORTHO05D009802 5.6e-07 58.9 135 39.3
Gohir.D13G089850 Gossypium hirsutum HOM05D018013 ORTHO05D013371 5.6e-07 58.9 140 39.3
Oeu024138.1 Olea europaea HOM05D011353 ORTHO05D009956 5.6e-07 58.9 97 47.4
Haze_11837 Corylus avellana HOM05D017299 ORTHO05D013371 9.6e-07 58.2 145 42.1
TWI60G1323 Tripterygium wilfordii HOM05D008889 ORTHO05D009956 9.6e-07 58.2 118 41.5
Prupe.1G298800 Prunus persica HOM05D014692 ORTHO05D014734 1.6e-06 57.4 138 40.6
CiPaw.05G119800 Carya illinoinensis HOM05D017299 ORTHO05D013371 2.1e-06 57.0 140 40.0
Actinidia30176 Actinidia chinensis HOM05D011353 ORTHO05D009802 2.8e-06 56.6 143 38.5
Gohir.A13G093400 Gossypium hirsutum HOM05D018013 ORTHO05D013371 2.8e-06 56.6 140 38.6
FAN02G0304 Fragaria x ananassa HOM05D008889 ORTHO05D009956 3.6e-06 56.2 108 38.9
Gorai.013G103000 Gossypium raimondii HOM05D018013 ORTHO05D013371 3.6e-06 56.2 140 38.6
FAN09G2052 Fragaria x ananassa HOM05D008889 ORTHO05D009956 4.8e-06 55.8 122 36.9
RcHm_v2.0_Chr2g0164181 Rosa chinensis HOM05D008889 ORTHO05D009956 4.8e-06 55.8 108 38.9
Sopen05g006040 Solanum pennellii HOM05D011353 ORTHO05D009802 6.2e-06 55.5 131 35.1
PGSC0003DMG400025096 Solanum tuberosum HOM05D011353 ORTHO05D009802 6.2e-06 55.5 133 36.1
CSS0016849 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 8.1e-06 55.1 151 34.4


User provided reference genes

Program Settings