Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra08G0068400 Salix brachista HOM05D006937 ORTHO05D008747 1.8e-134 482.6 257 100.0
Potri.008G091400 Populus trichocarpa HOM05D006937 ORTHO05D008747 1.5e-43 180.6 116 80.2
Peaxi162Scf00222g00024 Petunia axillaris HOM05D006937 ORTHO05D008747 2.9e-39 166.4 115 71.3
Rhsim12G0077900 Rhododendron simsii HOM05D006937 ORTHO05D008747 3.2e-38 162.9 127 65.4
Manes.01G032100 Manihot esculenta HOM05D006937 ORTHO05D008747 2.7e-37 159.8 116 70.7
Prupe.1G280000 Prunus persica HOM05D006937 ORTHO05D008747 6.0e-37 158.7 116 68.1
CiPaw.06G089000 Carya illinoinensis HOM05D006937 ORTHO05D008747 1.0e-36 157.9 116 68.1
Ciclev10032989m.g Citrus clementina HOM05D006937 ORTHO05D008747 1.0e-36 157.9 113 70.8
Atru.chr11.1713 Acer truncatum HOM05D006937 ORTHO05D008747 2.3e-36 156.8 116 68.1
FAN07G0310 Fragaria x ananassa HOM05D006937 ORTHO05D008747 2.3e-36 156.8 116 67.2
FvH4_4g30700 Fragaria vesca HOM05D006937 ORTHO05D008747 3.9e-36 156.0 116 68.1
Thecc.02G339100 Theobroma cacao HOM05D006937 ORTHO05D008747 3.9e-36 156.0 116 69.0
FAN17G2174 Fragaria x ananassa HOM05D006937 ORTHO05D008747 5.1e-36 155.6 116 68.1
Gorai.009G325600 Gossypium raimondii HOM05D006937 ORTHO05D008747 5.1e-36 155.6 116 69.0
Gohir.D05G305600 Gossypium hirsutum HOM05D006937 ORTHO05D008747 6.7e-36 155.2 116 69.0
Duzib268G1027 Durio zibethinus HOM05D006937 ORTHO05D008747 1.1e-35 154.5 110 70.9
MD16G1066900 Malus domestica HOM05D006937 ORTHO05D008747 1.5e-35 154.1 116 69.0
CSS0011527 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 2.5e-35 153.3 116 67.2
MD13G1068100 Malus domestica HOM05D006937 ORTHO05D008747 2.5e-35 153.3 116 68.1
Nitab4.5_0000391g0170 Nicotiana tabacum HOM05D006937 ORTHO05D008747 2.5e-35 153.3 110 69.1
Gohir.A05G305601 Gossypium hirsutum HOM05D006937 ORTHO05D008747 3.3e-35 152.9 116 67.2
COL.COLO4_27967 Corchorus olitorius HOM05D006937 ORTHO05D008747 4.3e-35 152.5 116 66.4
RcHm_v2.0_Chr4g0439101 Rosa chinensis HOM05D006937 ORTHO05D008747 4.3e-35 152.5 116 66.4
MSTRG.2329 Avicennia marina HOM05D006937 ORTHO05D008747 5.7e-35 152.1 111 68.5
Eucgr.G02475 Eucalyptus grandis HOM05D006937 ORTHO05D008747 5.7e-35 152.1 116 65.5
QL03p069840 Quercus lobata HOM05D006937 ORTHO05D008747 5.7e-35 152.1 116 64.7
SGA_v2.0_scaffold287G47146 Striga asiatica HOM05D006937 ORTHO05D008747 5.7e-35 152.1 113 69.0
Oeu016239.1 Olea europaea HOM05D006937 ORTHO05D008747 7.4e-35 151.8 116 66.4
PGSC0003DMG401028340 Solanum tuberosum HOM05D006937 ORTHO05D008747 7.4e-35 151.8 116 63.8
Dinv34099 Davidia involucrata HOM05D003669 ORTHO05D005046 1.3e-34 151.0 111 68.5
DCAR_018308 Daucus carota HOM05D006937 ORTHO05D008747 1.6e-34 150.6 110 69.1
Migut.E00068 Erythranthe guttata HOM05D006937 ORTHO05D008747 1.6e-34 150.6 111 65.8
Haze_11954 Corylus avellana HOM05D006937 ORTHO05D008747 2.1e-34 150.2 125 62.4
Eucgr.D01709 Eucalyptus grandis HOM05D006937 ORTHO05D008747 2.1e-34 150.2 116 64.7
GSVIVG01025409001 Vitis vinifera HOM05D006937 ORTHO05D008747 2.1e-34 150.2 116 62.9
Nitab4.5_0008978g0010 Nicotiana tabacum HOM05D006937 ORTHO05D008747 3.7e-34 149.4 128 61.7
TWI60G0457 Tripterygium wilfordii HOM05D006937 ORTHO05D008747 3.7e-34 149.4 116 65.5
Sopen05g007730 Solanum pennellii HOM05D006937 ORTHO05D008747 4.8e-34 149.1 116 62.1
Sed0007221 Sechium edule HOM05D006937 ORTHO05D008747 6.3e-34 148.7 150 50.7
Hund25447 Selenicereus undatus HOM05D006937 ORTHO05D008747 6.3e-34 148.7 110 64.5
CAN.G1642.3 Capsicum annuum HOM05D006937 ORTHO05D008747 8.2e-34 148.3 116 64.7
Cc11_g12540 Coffea canephora HOM05D006937 ORTHO05D008747 8.2e-34 148.3 113 66.4
CAN.G964.22 Capsicum annuum HOM05D006937 ORTHO05D008747 1.8e-33 147.1 116 63.8
PGR119G1353 Punica granatum HOM05D006937 ORTHO05D008747 1.8e-33 147.1 125 60.0
SHI35111 Sapria himalayana HOM05D006937 ORTHO05D008747 1.8e-33 147.1 139 55.4
MELO3C024261.2 Cucumis melo HOM05D006937 ORTHO05D008747 2.4e-33 146.7 114 62.3
Sed0004013 Sechium edule HOM05D006937 ORTHO05D008747 2.4e-33 146.7 107 66.4
VMungo1215G2773 Vigna mungo HOM05D006937 ORTHO05D008747 2.4e-33 146.7 111 64.0
Lalb_Chr10g0098481 Lupinus albus HOM05D006937 ORTHO05D008747 3.1e-33 146.4 120 62.5
Sc11g0000570 Simmondsia chinensis HOM05D006937 ORTHO05D008747 3.1e-33 146.4 109 65.1
CANSAT64G0520 Cannabis sativa HOM05D006937 ORTHO05D008747 4.1e-33 146.0 116 62.9
AUR62024142 Chenopodium quinoa HOM05D006937 ORTHO05D008747 4.1e-33 146.0 110 64.5
Glyma.01G053200 Glycine max HOM05D006937 ORTHO05D008747 4.1e-33 146.0 116 62.9
CsaV3_7G033500 Cucumis sativus L. HOM05D006937 ORTHO05D008747 5.3e-33 145.6 118 58.5
SGA_v2.0_scaffold114G32026 Striga asiatica HOM05D006937 ORTHO05D008747 5.3e-33 145.6 123 64.2
unitig_744.g24284 Utricularia gibba HOM05D006937 ORTHO05D008747 5.3e-33 145.6 128 57.8
EL10Ac6g13467 Beta vulgaris HOM05D006937 ORTHO05D008747 9.0e-33 144.8 116 62.1
Medtr5g042620 Medicago truncatula HOM05D006937 ORTHO05D008747 1.2e-32 144.4 116 62.1
PGR142G2813 Punica granatum HOM05D006937 ORTHO05D008747 1.5e-32 144.1 124 60.5
Lj3A1033G46 Lonicera japonica HOM05D006937 ORTHO05D008747 2.0e-32 143.7 116 62.9
ATR0730G163 Amborella trichopoda HOM05D006937 ORTHO05D008747 2.6e-32 143.3 118 60.2
Glyma.02G111700 Glycine max HOM05D006937 ORTHO05D008747 2.6e-32 143.3 116 62.1
Lj6g0000786 Lotus japonicus HOM05D006937 ORTHO05D008747 2.6e-32 143.3 116 61.2
Phvul.001G169600 Phaseolus vulgaris HOM05D006937 ORTHO05D008747 2.6e-32 143.3 116 61.2
HanXRQChr17g0537301 Helianthus annuus HOM05D006937 ORTHO05D008747 7.6e-32 141.7 111 64.0
TAR629G2875 Trochodendron aralioides HOM05D006937 ORTHO05D008747 7.6e-32 141.7 116 59.5
Lj1g0016193 Lotus japonicus HOM05D006937 ORTHO05D008747 1.0e-31 141.4 116 60.3
AUR62005588 Chenopodium quinoa HOM05D006937 ORTHO05D008747 1.3e-31 141.0 107 63.6
Lsat_1_v5_gn_3_20221 Lactuca sativa HOM05D006937 ORTHO05D008747 2.9e-31 139.8 111 64.0
Psat2g127680 Pisum sativum HOM05D006937 ORTHO05D008747 2.9e-31 139.8 116 59.5
HPP92_013408 Vanilla planifolia HOM05D006937 ORTHO05D008747 2.9e-31 139.8 102 64.7
arahy.Tifrunner.gnm1.ann1.TRF8LB Arachis hypogaea HOM05D006937 ORTHO05D008747 3.8e-31 139.4 113 61.9
Aqoxy3G03499 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 5.0e-31 139.0 111 60.4
Aqoxy5G02063 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 5.0e-31 139.0 111 60.4
ECA246G2190 Erigeron canadensis HOM05D006937 ORTHO05D008747 5.0e-31 139.0 111 63.1
PSO541G5056 Papaver somniferum HOM05D006937 ORTHO05D008747 8.5e-31 138.3 107 63.6
Zm00001eb326530 Zea mays HOM05D006937 ORTHO05D008747 1.1e-30 137.9 108 61.1
arahy.Tifrunner.gnm1.ann1.A48TS2 Arachis hypogaea HOM05D006937 ORTHO05D008747 1.4e-30 137.5 109 63.3
Nn3g17337 Nelumbo nucifera HOM05D006937 ORTHO05D008747 1.4e-30 137.5 110 61.8
Os07g0595800 Oryza sativa ssp. japonica HOM05D006937 ORTHO05D008747 1.4e-30 137.5 108 62.0
PSO675G6138 Papaver somniferum HOM05D006937 ORTHO05D008747 1.4e-30 137.5 114 60.5
Ca_04880_v3 Cicer arietinum L. HOM05D006937 ORTHO05D008747 2.5e-30 136.7 110 62.7
Aqoxy5G02982 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 1.6e-29 134.0 110 58.2
TPR.G19944 Trifolium pratense HOM05D006937 ORTHO05D008747 1.6e-29 134.0 108 58.3
arahy.Tifrunner.gnm1.ann1.8BL9U8 Arachis hypogaea HOM05D006937 ORTHO05D008747 2.1e-29 133.7 113 61.1
SEGI_41088 Sequoiadendron giganteum HOM05D006937 ORTHO05D008747 8.7e-28 128.3 110 58.2
CDE11G0882 Ceratophyllum demersum HOM05D006937 ORTHO05D008747 1.9e-27 127.1 139 46.0
FAN12G3635 Fragaria x ananassa HOM05D006937 ORTHO05D008747 9.7e-27 124.8 76 77.6
AagrBONN_evm.TU.Sc2ySwM_228.447 Anthoceros agrestis HOM05D006937 ORTHO05D008747 3.7e-26 122.9 106 58.5
THA.LOC104808654 Tarenaya hassleriana HOM05D006937 ORTHO05D008747 9.1e-25 118.2 104 58.7
SalBow8G3842 Salvia bowleyana HOM05D006937 ORTHO05D008747 4.5e-24 115.9 138 44.9
BcaB03g14081 Brassica carinata HOM05D006937 ORTHO05D008747 2.9e-23 113.2 110 54.5
arahy.Tifrunner.gnm1.ann1.J4SELD Arachis hypogaea HOM05D006937 ORTHO05D008747 3.8e-23 112.8 75 72.0
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 3.8e-23 112.8 122 51.6
Sp6g00050 Schrenkiella parvula HOM05D006937 ORTHO05D008747 3.8e-23 112.8 104 56.7
AL1G39070 Arabidopsis lyrata HOM05D006937 ORTHO05D008747 6.5e-23 112.1 103 56.3
Thhalv10008997m.g Eutrema salsugineum HOM05D006937 ORTHO05D008747 6.5e-23 112.1 104 55.8
BcaC06g35132 Brassica carinata HOM05D006937 ORTHO05D008747 8.5e-23 111.7 110 54.5
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 1.4e-22 110.9 104 55.8
Carub.0001s2437 Capsella rubella HOM05D006937 ORTHO05D008747 1.4e-22 110.9 111 52.3
BcaB05g21932 Brassica carinata HOM05D006937 ORTHO05D008747 1.9e-22 110.5 110 52.7
AT1G26660 Arabidopsis thaliana HOM05D006937 ORTHO05D008747 5.5e-22 109.0 103 55.3
Aa31LG7G8430 Aethionema arabicum HOM05D006937 ORTHO05D008747 7.2e-22 108.6 104 54.8
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 9.4e-22 108.2 122 50.0
arahy.Tifrunner.gnm1.ann1.K4YSPN Arachis hypogaea HOM05D006937 ORTHO05D008747 1.2e-21 107.8 64 79.7
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 1.2e-21 107.8 111 51.4
Actinidia31958 Actinidia chinensis HOM05D003669 ORTHO05D005046 3.6e-21 106.3 124 49.2
PSO357G0488 Papaver somniferum HOM05D006937 ORTHO05D008747 1.0e-20 104.8 75 68.0
CBR_g48697 Chara braunii HOM05D006937 ORTHO05D008747 2.3e-20 103.6 113 46.0
Mapoly0006s0094 Marchantia polymorpha HOM05D006937 ORTHO05D008747 5.1e-20 102.4 95 56.8
Pp3c21_19110 Physcomitrium patens HOM05D006937 ORTHO05D008747 3.3e-19 99.8 106 50.0
Ah.02g130690 Amaranthus hybridus HOM05D006937 ORTHO05D008747 1.0e-15 88.2 110 41.8
CSS0016362 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 1.0e-15 88.2 112 47.3
Sabra10G0124400 Salix brachista HOM05D006937 ORTHO05D008747 3.2e-14 83.2 119 46.2
BcaC05g26400 Brassica carinata HOM05D004525 ORTHO05D005295 1.7e-10 70.9 46 73.9
Potri.010G163600 Populus trichocarpa HOM05D006937 ORTHO05D008747 2.8e-10 70.1 59 64.4
ClCG09G001850 Citrullus lanatus HOM05D006937 ORTHO05D008747 1.2e-08 64.7 41 65.9
A09p40080 Brassica napus HOM05D004525 ORTHO05D005295 1.6e-08 64.3 70 48.6
Cc00_g19610 Coffea canephora HOM05D000421 ORTHO05D013979 1.9e-06 57.4 36 77.8
Cc08_g04320 Coffea canephora HOM05D006937 ORTHO05D013979 1.9e-06 57.4 36 77.8


User provided reference genes

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