Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra08G0063800 Salix brachista HOM05D007096 ORTHO05D008288 1.5e-65 252.7 129 100.0
Potri.008G086100 Populus trichocarpa HOM05D007096 ORTHO05D008288 2.1e-38 162.5 92 91.3
Potri.010G169300 Populus trichocarpa HOM05D007096 ORTHO05D008288 2.5e-31 139.0 92 77.2
Sabra10G0129100 Salix brachista HOM05D007096 ORTHO05D008288 1.8e-29 132.9 92 72.8
Manes.05G101400 Manihot esculenta HOM05D007096 ORTHO05D008288 2.1e-22 109.4 93 64.5
Ciclev10033178m.g Citrus clementina HOM05D007096 ORTHO05D008288 1.8e-21 106.3 94 64.9
Cfa008979 Carpinus fangiana HOM05D007096 ORTHO05D008288 8.9e-21 104.0 93 60.2
Haze_12011 Corylus avellana HOM05D007096 ORTHO05D008288 2.6e-20 102.4 93 59.1
CiPaw.05G135100 Carya illinoinensis HOM05D007096 ORTHO05D008288 2.2e-19 99.4 93 59.1
CiPaw.06G085100 Carya illinoinensis HOM05D007096 ORTHO05D008288 1.4e-18 96.7 93 55.9
Thecc.02G346100 Theobroma cacao HOM05D007096 ORTHO05D008288 3.2e-18 95.5 95 55.8
TAR629G1384 Trochodendron aralioides HOM05D000618 ORTHO05D000454 3.2e-18 95.5 85 61.2
TAR371G0768 Trochodendron aralioides HOM05D007096 ORTHO05D008288 5.4e-18 94.7 94 56.4
Nn3g17242 Nelumbo nucifera HOM05D007096 ORTHO05D008288 1.2e-17 93.6 93 52.7
Manes.01G185500 Manihot esculenta HOM05D007096 ORTHO05D008288 3.0e-16 89.0 93 55.9
Prupe.1G274800 Prunus persica HOM05D007096 ORTHO05D008288 8.6e-16 87.4 96 55.2
Gorai.009G324600 Gossypium raimondii HOM05D007096 ORTHO05D008288 4.3e-15 85.1 95 51.6
CSS0036898 Camellia sinensis var. sinensis HOM05D007096 ORTHO05D008288 5.6e-15 84.7 90 55.6
CSS0038022 Camellia sinensis var. sinensis HOM05D007096 ORTHO05D008288 5.6e-15 84.7 90 55.6
Gohir.D05G304900 Gossypium hirsutum HOM05D007096 ORTHO05D008288 5.6e-15 84.7 95 51.6
Eucgr.B03446 Eucalyptus grandis HOM05D007096 ORTHO05D008288 7.3e-15 84.3 92 53.3
Gohir.A05G183700 Gossypium hirsutum HOM05D007096 ORTHO05D008288 7.3e-15 84.3 95 51.6
Nn4g23168 Nelumbo nucifera HOM05D007096 ORTHO05D008288 1.2e-14 83.6 93 52.7
TAR622G0633 Trochodendron aralioides HOM05D000618 ORTHO05D000454 1.6e-14 83.2 97 51.5
DCAR_031024 Daucus carota HOM05D007096 ORTHO05D008288 4.0e-13 78.6 93 47.3
Gohir.D12G168200 Gossypium hirsutum HOM05D007096 ORTHO05D008288 4.0e-13 78.6 93 52.7
Gorai.008G181100 Gossypium raimondii HOM05D007096 ORTHO05D008288 4.0e-13 78.6 93 52.7
TAR374G0516 Trochodendron aralioides HOM05D007096 ORTHO05D008288 4.0e-13 78.6 87 49.4
CSS0030953 Camellia sinensis var. sinensis HOM05D007096 ORTHO05D008288 6.8e-13 77.8 94 52.1
Duzib268G0913 Durio zibethinus HOM05D007096 ORTHO05D008288 6.8e-13 77.8 95 50.5
Gohir.A12G165100 Gossypium hirsutum HOM05D007096 ORTHO05D008288 1.5e-12 76.6 93 51.6
RcHm_v2.0_Chr4g0439851 Rosa chinensis HOM05D007096 ORTHO05D008288 4.4e-12 75.1 94 51.1
CSS0038065 Camellia sinensis var. sinensis HOM05D007096 ORTHO05D008288 9.8e-12 73.9 88 52.3
Ah.02g129680 Amaranthus hybridus HOM05D007096 ORTHO05D008288 1.7e-11 73.2 93 46.2
Lalb_Chr04g0256051 Lupinus albus HOM05D015099 ORTHO05D008288 3.7e-11 72.0 93 49.5
Glyma.02G107400 Glycine max HOM05D015099 ORTHO05D008288 6.4e-11 71.2 107 45.8
Manes.14G078100 Manihot esculenta HOM05D007096 ORTHO05D008288 8.3e-11 70.9 94 45.7
Rhsim12G0063900 Rhododendron simsii HOM05D007096 ORTHO05D008288 8.3e-11 70.9 104 44.2
Eucgr.G02504 Eucalyptus grandis HOM05D007096 ORTHO05D008288 3.2e-10 68.9 86 46.5
Thecc.03G087500 Theobroma cacao HOM05D007096 ORTHO05D008288 4.1e-10 68.6 96 49.0
Atru.chr9.225 Acer truncatum HOM05D007096 ORTHO05D008288 5.4e-10 68.2 84 50.0
Ciclev10023845m.g Citrus clementina HOM05D007096 ORTHO05D008288 5.4e-10 68.2 89 46.1
Lalb_Chr10g0098271 Lupinus albus HOM05D015099 ORTHO05D008288 7.0e-10 67.8 86 44.2
Prupe.5G193600 Prunus persica HOM05D007096 ORTHO05D008288 7.0e-10 67.8 94 44.7
RcHm_v2.0_Chr7g0181441 Rosa chinensis HOM05D007096 ORTHO05D008288 1.2e-09 67.0 90 45.6
QL10p017020 Quercus lobata HOM05D007096 ORTHO05D008288 1.6e-09 66.6 90 47.8
Phvul.002G085300 Phaseolus vulgaris HOM05D015099 ORTHO05D008288 2.0e-09 66.2 107 43.9
Manes.06G092300 Manihot esculenta HOM05D007096 ORTHO05D008288 2.7e-09 65.9 96 45.8
Lsat_1_v5_gn_9_15420 Lactuca sativa HOM05D007096 ORTHO05D008288 3.5e-09 65.5 95 46.3
FAN13G0716 Fragaria x ananassa HOM05D007096 ORTHO05D008288 4.6e-09 65.1 88 44.3
FAN08G2460 Fragaria x ananassa HOM05D007096 ORTHO05D008288 7.8e-09 64.3 88 44.3
Cc00_g23090 Coffea canephora HOM05D007096 ORTHO05D008288 1.0e-08 63.9 94 43.6
Peaxi162Scf00911g00042 Petunia axillaris HOM05D007096 ORTHO05D008288 1.3e-08 63.5 93 39.8
CiPaw.11G044600 Carya illinoinensis HOM05D007096 ORTHO05D008288 2.3e-08 62.8 88 46.6
Lj4g0000471 Lotus japonicus HOM05D007096 ORTHO05D008288 2.3e-08 62.8 90 47.8
Peaxi162Scf00222g00814 Petunia axillaris HOM05D007096 ORTHO05D008288 3.0e-08 62.4 76 46.1
VMungo1215G2026 Vigna mungo HOM05D015099 ORTHO05D008288 3.0e-08 62.4 107 43.0
PGSC0003DMG400023201 Solanum tuberosum HOM05D007096 ORTHO05D008288 3.9e-08 62.0 88 42.0
BcaC03g15096 Brassica carinata HOM05D009494 ORTHO05D011604 5.0e-08 61.6 118 33.1
C02p26570 Brassica napus HOM05D009494 ORTHO05D011604 5.0e-08 61.6 118 33.1
BolC2t08728H Brassica oleracea HOM05D009494 ORTHO05D011604 5.0e-08 61.6 118 33.1
ClCG11G009950 Citrullus lanatus HOM05D007096 ORTHO05D008288 5.0e-08 61.6 94 41.5
Carub.0002s1626 Capsella rubella HOM05D009494 ORTHO05D011604 1.1e-07 60.5 111 36.9
CsaV3_1G005510 Cucumis sativus L. HOM05D007096 ORTHO05D008288 1.1e-07 60.5 97 41.2
CiPaw.12G013300 Carya illinoinensis HOM05D007096 ORTHO05D008288 1.5e-07 60.1 96 41.7
Glyma.04G169400 Glycine max HOM05D007096 ORTHO05D008288 1.5e-07 60.1 94 42.6
Glyma.06G194000 Glycine max HOM05D007096 ORTHO05D008288 1.5e-07 60.1 95 44.2
Gohir.D04G191800 Gossypium hirsutum HOM05D007096 ORTHO05D008288 1.5e-07 60.1 94 43.6
Nitab4.5_0000145g0050 Nicotiana tabacum HOM05D007096 ORTHO05D008288 1.9e-07 59.7 83 42.2
Sp5g24710 Schrenkiella parvula HOM05D009494 ORTHO05D011604 1.9e-07 59.7 113 34.5
DCAR_016556 Daucus carota HOM05D007096 ORTHO05D008288 2.5e-07 59.3 90 42.2
Glyma.17G100200 Glycine max HOM05D007096 ORTHO05D008288 2.5e-07 59.3 96 42.7
Gohir.D02G125800 Gossypium hirsutum HOM05D007096 ORTHO05D008288 2.5e-07 59.3 92 39.1
Gorai.012G187200 Gossypium raimondii HOM05D007096 ORTHO05D008288 2.5e-07 59.3 94 43.6
BcaB03g15485 Brassica carinata HOM05D009494 ORTHO05D011604 3.3e-07 58.9 76 42.1
COL.COLO4_09292 Corchorus olitorius HOM05D007096 ORTHO05D008288 4.3e-07 58.5 89 44.9
Thhalv10019320m.g Eutrema salsugineum HOM05D009494 ORTHO05D011604 4.3e-07 58.5 114 37.7
Gohir.A04G147500 Gossypium hirsutum HOM05D007096 ORTHO05D008288 4.3e-07 58.5 94 43.6
Gorai.005G141500 Gossypium raimondii HOM05D007096 ORTHO05D008288 4.3e-07 58.5 92 39.1
Lj1g0007220 Lotus japonicus HOM05D007096 ORTHO05D008288 4.3e-07 58.5 86 48.8
Oeu047297.1 Olea europaea HOM05D007096 ORTHO05D008288 4.3e-07 58.5 95 43.2
THA.LOC104822126 Tarenaya hassleriana HOM05D009494 ORTHO05D011604 4.3e-07 58.5 111 36.9
A02p15990 Brassica napus HOM05D009494 ORTHO05D011604 5.6e-07 58.2 118 32.2
Aa31LG4G11160 Aethionema arabicum HOM05D009494 ORTHO05D011604 1.2e-06 57.0 111 37.8
Migut.L01293 Erythranthe guttata HOM05D007096 ORTHO05D008288 1.2e-06 57.0 97 42.3
COL.COLO4_23015 Corchorus olitorius HOM05D007096 ORTHO05D008288 1.6e-06 56.6 77 53.2
Glyma.01G047800 Glycine max HOM05D015099 ORTHO05D008288 1.6e-06 56.6 107 41.1
Phvul.009G187200 Phaseolus vulgaris HOM05D007096 ORTHO05D008288 1.6e-06 56.6 94 38.3
C06p36810 Brassica napus HOM05D009494 ORTHO05D011604 2.8e-06 55.8 76 38.2
BraA02t06659Z Brassica rapa HOM05D009494 ORTHO05D011604 3.6e-06 55.5 112 33.9
BraA07t30782Z Brassica rapa HOM05D009494 ORTHO05D011604 3.6e-06 55.5 76 39.5
Oeu054876.1 Olea europaea HOM05D007096 ORTHO05D008288 3.6e-06 55.5 96 38.5
BcaB05g24463 Brassica carinata HOM05D009494 ORTHO05D011604 4.7e-06 55.1 76 39.5
Sed0002990 Sechium edule HOM05D007096 ORTHO05D008288 4.7e-06 55.1 92 35.9
ClCG04G012240 Citrullus lanatus HOM05D007096 ORTHO05D008288 6.2e-06 54.7 90 40.0
CsaV3_2G010680 Cucumis sativus L. HOM05D007096 ORTHO05D008288 6.2e-06 54.7 95 40.0
BcaC08g45881 Brassica carinata HOM05D009494 ORTHO05D011604 8.1e-06 54.3 76 38.2
A07p31500 Brassica napus HOM05D009494 ORTHO05D011604 8.1e-06 54.3 116 32.8
BolC6t38790H Brassica oleracea HOM05D009494 ORTHO05D011604 8.1e-06 54.3 76 38.2
Migut.E00089 Erythranthe guttata HOM05D007096 ORTHO05D008288 8.1e-06 54.3 97 39.2


User provided reference genes

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