Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra08G0063600 Salix brachista HOM05D000846 ORTHO05D006755 5.5e-81 304.3 159 100.0
Potri.008G085800 Populus trichocarpa HOM05D000846 ORTHO05D006755 2.3e-71 272.3 148 95.3
Potri.010G169800 Populus trichocarpa HOM05D000846 ORTHO05D006755 5.7e-70 267.7 148 93.2
Sabra10G0129600 Salix brachista HOM05D000846 ORTHO05D006755 5.7e-70 267.7 148 93.2
QL02p099167 Quercus lobata HOM05D000846 ORTHO05D006755 6.3e-69 264.2 152 89.5
Atru.chr11.1221 Acer truncatum HOM05D000846 ORTHO05D006755 1.4e-68 263.1 148 89.9
Manes.03G080600 Manihot esculenta HOM05D000846 ORTHO05D006755 5.4e-68 261.2 146 91.1
MD15G1425400 Malus domestica HOM05D000846 ORTHO05D006755 9.1e-68 260.4 147 89.8
TAR381G0552 Trochodendron aralioides HOM05D000846 ORTHO05D006755 3.5e-67 258.5 148 87.8
CANSAT25G3612 Cannabis sativa HOM05D000846 ORTHO05D006755 4.5e-67 258.1 148 87.8
MD08G1234100 Malus domestica HOM05D000846 ORTHO05D006755 1.0e-66 256.9 148 87.2
Cpa.g.sc39.48 Carica papaya HOM05D000846 ORTHO05D006755 1.7e-66 256.1 153 86.3
Nn5g28327 Nelumbo nucifera HOM05D000846 ORTHO05D006755 8.5e-66 253.8 157 81.5
Dinv19375 Davidia involucrata HOM05D000846 ORTHO05D006755 4.2e-65 251.5 148 85.8
GSVIVG01022879001 Vitis vinifera HOM05D000846 ORTHO05D006755 4.2e-65 251.5 148 85.1
MD08G1233700 Malus domestica HOM05D000846 ORTHO05D006755 5.5e-65 251.1 155 83.9
CiPaw.06G146600 Carya illinoinensis HOM05D000846 ORTHO05D006755 1.2e-64 250.0 148 86.5
Phvul.006G215200 Phaseolus vulgaris HOM05D000846 ORTHO05D006755 4.7e-64 248.1 148 85.1
PGSC0003DMG400023766 Solanum tuberosum HOM05D000846 ORTHO05D006755 1.4e-63 246.5 148 82.4
VMungo0540G0381 Vigna mungo HOM05D000846 ORTHO05D006755 1.4e-63 246.5 148 85.1
Glyma.08G187000 Glycine max HOM05D000846 ORTHO05D006755 1.8e-63 246.1 148 85.1
Solyc01g104070.3 Solanum lycopersicum HOM05D000846 ORTHO05D006755 2.3e-63 245.7 148 81.8
Sopen01g046480 Solanum pennellii HOM05D000846 ORTHO05D006755 2.3e-63 245.7 148 81.8
Ciclev10030583m.g Citrus clementina HOM05D000846 ORTHO05D006755 3.0e-63 245.4 148 84.5
Nn1g08833 Nelumbo nucifera HOM05D000846 ORTHO05D006755 4.0e-63 245.0 148 83.1
Nitab4.5_0010336g0020 Nicotiana tabacum HOM05D000846 ORTHO05D006755 4.0e-63 245.0 148 83.1
COL.COLO4_27512 Corchorus olitorius HOM05D000846 ORTHO05D006755 8.8e-63 243.8 148 82.4
CAN.G798.7 Capsicum annuum HOM05D000846 ORTHO05D006755 1.2e-62 243.4 148 81.1
Glyma.15G046000 Glycine max HOM05D000846 ORTHO05D006755 1.5e-62 243.0 148 84.5
Thecc.02G295900 Theobroma cacao HOM05D000846 ORTHO05D006755 1.5e-62 243.0 148 83.1
CSS0000492 Camellia sinensis var. sinensis HOM05D000846 ORTHO05D006755 3.4e-62 241.9 146 82.2
Nitab4.5_0000816g0070 Nicotiana tabacum HOM05D000846 ORTHO05D006755 3.4e-62 241.9 148 82.4
Peaxi162Scf00017g02641 Petunia axillaris HOM05D000846 ORTHO05D006755 3.4e-62 241.9 148 81.1
Gohir.A05G308500 Gossypium hirsutum HOM05D000846 ORTHO05D006755 4.4e-62 241.5 148 81.8
Duzib251G0663 Durio zibethinus HOM05D000846 ORTHO05D006755 5.7e-62 241.1 148 82.4
Peaxi162Scf00011g00530 Petunia axillaris HOM05D000846 ORTHO05D006755 7.5e-62 240.7 148 80.4
arahy.Tifrunner.gnm1.ann1.VK9VX5 Arachis hypogaea HOM05D000846 ORTHO05D006755 9.8e-62 240.4 148 83.8
RcHm_v2.0_Chr7g0221821 Rosa chinensis HOM05D000846 ORTHO05D006755 1.3e-61 240.0 148 81.1
Aqoxy6G00235 Aquilegia oxysepala HOM05D000846 ORTHO05D006755 1.7e-61 239.6 148 83.1
Gorai.009G329500 Gossypium raimondii HOM05D000846 ORTHO05D006755 2.8e-61 238.8 148 81.1
CsaV3_3G019110 Cucumis sativus L. HOM05D000846 ORTHO05D006755 3.7e-61 238.4 146 82.2
Cc02_g22620 Coffea canephora HOM05D000846 ORTHO05D006755 4.9e-61 238.0 145 80.7
FAN08G3691 Fragaria x ananassa HOM05D000846 ORTHO05D006755 4.9e-61 238.0 148 80.4
Lj6g0026631 Lotus japonicus HOM05D000846 ORTHO05D006755 4.9e-61 238.0 148 81.1
PSO528G0036 Papaver somniferum HOM05D000846 ORTHO05D006755 4.9e-61 238.0 148 78.4
FvH4_5g29150 Fragaria vesca HOM05D000846 ORTHO05D006755 6.3e-61 237.7 148 80.4
Gohir.D05G309200 Gossypium hirsutum HOM05D000846 ORTHO05D006755 6.3e-61 237.7 146 82.2
HanXRQChr03g0073611 Helianthus annuus HOM05D000846 ORTHO05D006755 1.1e-60 236.9 148 78.4
MELO3C019464.2 Cucumis melo HOM05D000846 ORTHO05D006755 1.4e-60 236.5 146 81.5
FAN13G1889 Fragaria x ananassa HOM05D000846 ORTHO05D006755 1.4e-60 236.5 148 79.7
Lsat_1_v5_gn_9_118641 Lactuca sativa HOM05D000846 ORTHO05D006755 1.4e-60 236.5 146 78.1
FAN18G2713 Fragaria x ananassa HOM05D000846 ORTHO05D006755 1.8e-60 236.1 148 80.4
Lalb_Chr20g0123491 Lupinus albus HOM05D000846 ORTHO05D006755 2.4e-60 235.7 148 81.1
ClCG05G009620 Citrullus lanatus HOM05D000846 ORTHO05D006755 3.1e-60 235.3 146 80.8
Rhsim05G0119700 Rhododendron simsii HOM05D000846 ORTHO05D006755 3.1e-60 235.3 148 79.1
Oeu008902.1 Olea europaea HOM05D000846 ORTHO05D006755 5.4e-60 234.6 148 78.4
Oeu008904.1 Olea europaea HOM05D000846 ORTHO05D006755 5.4e-60 234.6 148 78.4
PGR142G3343 Punica granatum HOM05D000846 ORTHO05D006755 7.0e-60 234.2 148 77.0
Ca_00067_v3 Cicer arietinum L. HOM05D000846 ORTHO05D006755 1.2e-59 233.4 148 79.7
Sed0025663 Sechium edule HOM05D000846 ORTHO05D006755 1.2e-59 233.4 148 79.7
Cfa005511 Carpinus fangiana HOM05D000846 ORTHO05D006755 1.6e-59 233.0 148 80.4
Haze_01712 Corylus avellana HOM05D000846 ORTHO05D006755 1.6e-59 233.0 148 81.1
DCAR_001823 Daucus carota HOM05D000846 ORTHO05D006755 1.6e-59 233.0 148 79.1
FAN04G0084 Fragaria x ananassa HOM05D000846 ORTHO05D006755 1.6e-59 233.0 148 79.1
Sc07g0004850 Simmondsia chinensis HOM05D000846 ORTHO05D006755 2.0e-59 232.6 148 77.0
vmacro19885 Vaccinium macrocarpon HOM05D000846 ORTHO05D006755 2.0e-59 232.6 148 77.7
PSO170G2918 Papaver somniferum HOM05D000846 ORTHO05D006755 3.5e-59 231.9 148 77.0
Ah.03g132090 Amaranthus hybridus HOM05D000846 ORTHO05D006755 5.9e-59 231.1 151 77.5
TPR.G39917 Trifolium pratense HOM05D000846 ORTHO05D006755 5.9e-59 231.1 148 78.4
MSTRG.16514 Avicennia marina HOM05D000846 ORTHO05D006755 1.0e-58 230.3 148 75.7
Medtr2g006750 Medicago truncatula HOM05D000846 ORTHO05D006755 1.3e-58 229.9 148 79.1
AUR62026527 Chenopodium quinoa HOM05D000846 ORTHO05D006755 3.8e-58 228.4 148 75.7
AUR62026329 Chenopodium quinoa HOM05D000846 ORTHO05D006755 1.1e-57 226.9 148 75.7
ECA240G4115 Erigeron canadensis HOM05D000846 ORTHO05D006755 2.5e-57 225.7 148 74.3
Migut.B00826 Erythranthe guttata HOM05D000846 ORTHO05D006755 3.3e-57 225.3 148 76.4
Eucgr.I02730 Eucalyptus grandis HOM05D000846 ORTHO05D006755 5.5e-57 224.6 148 76.4
EL10Ac6g13093 Beta vulgaris HOM05D000846 ORTHO05D006755 7.2e-57 224.2 148 75.0
SGA_v2.0_scaffold110G31332 Striga asiatica HOM05D000846 ORTHO05D006755 9.5e-57 223.8 148 74.3
unitig_21.g20912 Utricularia gibba HOM05D000846 ORTHO05D006755 5.2e-55 218.0 148 74.3
Psat1g221240 Pisum sativum HOM05D000846 ORTHO05D006755 1.2e-54 216.9 144 74.3
MBI01_g09375_MAGBIO Magnolia biondii HOM05D000846 ORTHO05D006755 2.6e-54 215.7 148 74.3
HPP92_009356 Vanilla planifolia HOM05D000846 ORTHO05D006755 1.7e-53 213.0 146 72.6
THA.LOC104805711 Tarenaya hassleriana HOM05D000846 ORTHO05D006755 4.1e-52 208.4 144 71.5
Os03g0261900 Oryza sativa ssp. japonica HOM05D000846 ORTHO05D006755 9.2e-52 207.2 144 73.6
Sp7g25600 Schrenkiella parvula HOM05D000846 ORTHO05D006755 2.3e-50 202.6 148 70.3
AT4G27640 Arabidopsis thaliana HOM05D000846 ORTHO05D006755 5.0e-50 201.4 148 68.2
AL7G25080 Arabidopsis lyrata HOM05D000846 ORTHO05D006755 6.6e-50 201.1 148 68.2
BolC7t46041H Brassica oleracea HOM05D000846 ORTHO05D006755 5.6e-49 198.0 144 68.8
Aa31LG9G17870 Aethionema arabicum HOM05D000846 ORTHO05D006755 7.3e-49 197.6 143 69.9
A03p57390 Brassica napus HOM05D000846 ORTHO05D006755 7.3e-49 197.6 144 68.8
BraA03t14805Z Brassica rapa HOM05D000846 ORTHO05D006755 7.3e-49 197.6 144 68.8
ATR0665G276 Amborella trichopoda HOM05D000846 ORTHO05D006755 1.2e-48 196.8 148 65.5
HanXRQChr16g0511911 Helianthus annuus HOM05D000846 ORTHO05D006755 1.2e-48 196.8 148 67.6
C07p55610 Brassica napus HOM05D000846 ORTHO05D006755 1.6e-48 196.4 144 68.1
BcaC06g32677 Brassica carinata HOM05D000846 ORTHO05D006755 2.1e-48 196.1 144 68.8
BcaNung01650 Brassica carinata HOM05D000846 ORTHO05D006755 1.8e-47 193.0 148 66.9
Carub.0007s1321 Capsella rubella HOM05D000846 ORTHO05D006755 1.8e-47 193.0 148 66.9
SEGI_41093 Sequoiadendron giganteum HOM05D000846 ORTHO05D006755 1.8e-47 193.0 148 64.2
Thhalv10024293m.g Eutrema salsugineum HOM05D000846 ORTHO05D006755 2.3e-47 192.6 148 64.9
A01p18930 Brassica napus HOM05D000846 ORTHO05D006755 8.9e-47 190.7 144 67.4
BraA01t01834Z Brassica rapa HOM05D000846 ORTHO05D006755 8.9e-47 190.7 144 67.4
Cfa005509 Carpinus fangiana HOM05D002649 ORTHO05D002838 2.6e-46 189.1 144 72.2
C01p23880 Brassica napus HOM05D000846 ORTHO05D006755 7.5e-46 187.6 144 66.7
BolC1t02333H Brassica oleracea HOM05D000846 ORTHO05D006755 7.5e-46 187.6 144 66.7
Prupe.1G571100 Prunus persica HOM05D000846 ORTHO05D006755 1.3e-45 186.8 148 66.9
BcaC09g50565 Brassica carinata HOM05D000846 ORTHO05D006755 2.9e-45 185.7 144 66.0
Lsat_1_v5_gn_7_78561 Lactuca sativa HOM05D000846 ORTHO05D006755 1.3e-42 176.8 147 61.2
Hund15507 Selenicereus undatus HOM05D000846 ORTHO05D006755 1.4e-39 166.8 105 79.0
EL10Ac9g22362 Beta vulgaris HOM05D000846 ORTHO05D006755 1.2e-38 163.7 119 73.9
AagrBONN_evm.TU.Sc2ySwM_228.251 Anthoceros agrestis HOM05D000846 ORTHO05D006755 2.1e-35 152.9 147 56.5
SMO364G0838 Selaginella moellendorffii HOM05D000846 ORTHO05D006755 2.1e-32 142.9 146 53.4
Pp3c4_7610 Physcomitrium patens HOM05D000846 ORTHO05D006755 8.9e-31 137.5 141 53.2
Mapoly0029s0100 Marchantia polymorpha HOM05D000846 ORTHO05D006755 1.3e-29 133.7 141 52.5
CBR_g3136 Chara braunii HOM05D000846 ORTHO05D006755 3.5e-27 125.6 140 45.7
Nitab4.5_0000176g0040 Nicotiana tabacum HOM05D000846 ORTHO05D006755 3.3e-25 119.0 177 46.3
ECA236G1359 Erigeron canadensis HOM05D000846 ORTHO05D006755 9.6e-25 117.5 90 64.4
Actinidia39034 Actinidia chinensis HOM05D000846 ORTHO05D006755 6.2e-16 88.2 55 83.6
Cre12.g490850 Chlamydomonas reinhardtii HOM05D000846 ORTHO05D006755 7.1e-12 74.7 156 37.8
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 2.5e-09 66.2 42 78.6
SHI37023 Sapria himalayana HOM05D000846 ORTHO05D006755 1.3e-08 63.9 41 75.6
PRCOL_00005470 Prasinoderma coloniale HOM05D000846 ORTHO05D006755 2.0e-06 56.6 142 31.0
MCO06G140 Micromonas commoda HOM05D000846 ORTHO05D006755 5.8e-06 55.1 100 41.0


User provided reference genes

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