Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra08G0051100 Salix brachista HOM05D005616 ORTHO05D006975 7.7e-155 550.4 276 100.0
Potri.008G069500 Populus trichocarpa HOM05D005616 ORTHO05D006975 3.7e-141 505.0 276 92.0
Potri.012G145600 Populus trichocarpa HOM05D005616 ORTHO05D006975 1.7e-125 453.0 252 90.1
Manes.10G011400 Manihot esculenta HOM05D005616 ORTHO05D006975 1.7e-109 399.8 276 73.2
Haze_17234 Corylus avellana HOM05D005616 ORTHO05D006975 6.8e-103 377.9 276 68.8
Ciclev10032361m.g Citrus clementina HOM05D005616 ORTHO05D006975 1.6e-99 366.7 278 68.7
Lj8A66T51 Lonicera japonica HOM05D005616 ORTHO05D006975 3.5e-99 365.5 277 67.5
Lalb_Chr08g0231681 Lupinus albus HOM05D005616 ORTHO05D006975 6.0e-99 364.8 276 67.8
MD07G1223000 Malus domestica HOM05D005616 ORTHO05D006975 3.9e-98 362.1 277 67.1
Lj1g0010131 Lotus japonicus HOM05D005616 ORTHO05D006975 6.6e-98 361.3 276 66.3
Prupe.2G251100 Prunus persica HOM05D005616 ORTHO05D006975 2.1e-96 356.3 277 66.1
RcHm_v2.0_Chr1g0370411 Rosa chinensis HOM05D005616 ORTHO05D006975 2.1e-96 356.3 276 67.0
FAN07G0068 Fragaria x ananassa HOM05D005616 ORTHO05D006975 3.6e-96 355.5 278 66.9
Medtr3g070890 Medicago truncatula HOM05D005616 ORTHO05D006975 1.4e-95 353.6 276 65.6
Thecc.10G015200 Theobroma cacao HOM05D005616 ORTHO05D006975 1.4e-95 353.6 277 66.1
Glyma.11G230900 Glycine max HOM05D005616 ORTHO05D006975 5.2e-95 351.7 276 65.2
TWI09G1208 Tripterygium wilfordii HOM05D005616 ORTHO05D006975 6.8e-95 351.3 276 66.7
Glyma.18G026400 Glycine max HOM05D005616 ORTHO05D006975 8.9e-95 350.9 273 65.9
FvH4_7g24571 Fragaria vesca HOM05D005616 ORTHO05D006975 1.5e-94 350.1 278 66.2
Medtr3g449480 Medicago truncatula HOM05D005616 ORTHO05D006975 2.6e-94 349.4 272 65.8
CSS0029859 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 3.4e-94 349.0 276 62.7
Dinv10614 Davidia involucrata HOM05D005616 ORTHO05D006975 5.8e-94 348.2 276 63.4
Psat5g129880 Pisum sativum HOM05D005616 ORTHO05D006975 5.8e-94 348.2 276 65.2
FAN06G2993 Fragaria x ananassa HOM05D001932 ORTHO05D006975 1.3e-93 347.1 275 66.2
FAN03G0254 Fragaria x ananassa HOM05D005616 ORTHO05D006975 3.7e-93 345.5 278 65.1
GSVIVG01032805001 Vitis vinifera HOM05D005616 ORTHO05D006975 4.9e-93 345.1 278 64.7
TPR.G11210 Trifolium pratense HOM05D005616 ORTHO05D006975 6.4e-93 344.7 276 64.9
FvH4_4g21980 Fragaria vesca HOM05D005616 ORTHO05D006975 1.4e-92 343.6 278 65.1
FAN01G0309 Fragaria x ananassa HOM05D001932 ORTHO05D006975 1.9e-92 343.2 276 65.6
THA.LOC104816542 Tarenaya hassleriana HOM05D005616 ORTHO05D006975 1.9e-92 343.2 276 62.7
Lj6g0010776 Lotus japonicus HOM05D005616 ORTHO05D006975 2.4e-92 342.8 276 63.8
Eucgr.J00201 Eucalyptus grandis HOM05D005616 ORTHO05D006975 7.1e-92 341.3 277 66.4
ECA233G4091 Erigeron canadensis HOM05D005616 ORTHO05D006975 1.0e-90 337.4 276 62.0
Phvul.001G244100 Phaseolus vulgaris HOM05D005616 ORTHO05D006975 1.3e-90 337.0 273 64.5
Duzib128G0549 Durio zibethinus HOM05D005616 ORTHO05D006975 2.3e-90 336.3 277 62.8
Sopen02g021670 Solanum pennellii HOM05D005616 ORTHO05D006975 3.9e-90 335.5 267 65.5
Gorai.012G116600 Gossypium raimondii HOM05D005616 ORTHO05D006975 1.5e-89 333.6 273 63.4
HanXRQChr08g0222401 Helianthus annuus HOM05D005616 ORTHO05D006975 1.5e-89 333.6 276 61.2
Nitab4.5_0005018g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 1.5e-89 333.6 253 68.8
Migut.F00691 Erythranthe guttata HOM05D005616 ORTHO05D006975 1.9e-89 333.2 276 62.0
Solyc02g076760.3 Solanum lycopersicum HOM05D005616 ORTHO05D006975 1.9e-89 333.2 267 65.5
PGSC0003DMG400010237 Solanum tuberosum HOM05D005616 ORTHO05D006975 1.9e-89 333.2 277 63.9
vmacro06962 Vaccinium macrocarpon HOM05D005616 ORTHO05D006975 2.5e-89 332.8 280 61.1
Aa31LG11G6640 Aethionema arabicum HOM05D005616 ORTHO05D006975 2.1e-88 329.7 274 61.7
FAN12G0831 Fragaria x ananassa HOM05D005616 ORTHO05D006975 2.1e-88 329.7 253 67.6
Gohir.A04G093400 Gossypium hirsutum HOM05D005616 ORTHO05D006975 2.8e-88 329.3 277 62.1
Nitab4.5_0003454g0010 Nicotiana tabacum HOM05D005616 ORTHO05D006975 6.2e-88 328.2 243 70.0
Cc02_g06410 Coffea canephora HOM05D005616 ORTHO05D006975 1.4e-87 327.0 272 62.9
Thhalv10014368m.g Eutrema salsugineum HOM05D005616 ORTHO05D006975 2.4e-87 326.2 276 60.5
FAN10G3671 Fragaria x ananassa HOM05D005616 ORTHO05D006975 2.4e-87 326.2 253 67.2
Sed0025730 Sechium edule HOM05D005616 ORTHO05D006975 5.2e-87 325.1 277 61.7
AT1G07780 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 6.8e-87 324.7 276 58.7
TAR623G1070 Trochodendron aralioides HOM05D005616 ORTHO05D006975 6.8e-87 324.7 231 71.0
AT5G05590 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 8.9e-87 324.3 276 58.7
VMungo1383G1171 Vigna mungo HOM05D005616 ORTHO05D006975 8.9e-87 324.3 245 67.8
MSTRG.8961 Avicennia marina HOM05D005616 ORTHO05D006975 1.2e-86 323.9 247 67.2
Ca_15132_v3 Cicer arietinum L. HOM05D005616 ORTHO05D006975 1.2e-86 323.9 252 65.5
AL6G15480 Arabidopsis lyrata HOM05D005616 ORTHO05D006975 1.5e-86 323.6 276 59.1
Peaxi162Scf00284g01041 Petunia axillaris HOM05D005616 ORTHO05D006975 2.0e-86 323.2 277 63.2
Sp6g37270 Schrenkiella parvula HOM05D005616 ORTHO05D006975 2.0e-86 323.2 274 59.1
Lsat_1_v5_gn_8_11701 Lactuca sativa HOM05D005616 ORTHO05D006975 2.6e-86 322.8 215 75.3
Peaxi162Scf00801g00729 Petunia axillaris HOM05D005616 ORTHO05D006975 5.8e-86 321.6 270 63.7
Oeu004695.1 Olea europaea HOM05D005616 ORTHO05D006975 7.6e-86 321.2 234 68.4
PSO675G8834 Papaver somniferum HOM05D005616 ORTHO05D006975 7.6e-86 321.2 276 61.2
ClCG07G004280 Citrullus lanatus HOM05D005616 ORTHO05D006975 9.9e-86 320.9 274 62.0
COL.COLO4_25743 Corchorus olitorius HOM05D005616 ORTHO05D006975 9.9e-86 320.9 272 62.1
CiPaw.02G193000 Carya illinoinensis HOM05D005616 ORTHO05D006975 1.3e-85 320.5 254 63.4
CsaV3_5G010220 Cucumis sativus L. HOM05D005616 ORTHO05D006975 2.2e-85 319.7 277 60.6
PSO384G3782 Papaver somniferum HOM05D005616 ORTHO05D006975 4.9e-85 318.5 277 61.7
Cfa001309 Carpinus fangiana HOM05D005616 ORTHO05D006975 8.4e-85 317.8 207 75.8
Carub.0006s0449 Capsella rubella HOM05D005616 ORTHO05D006975 3.2e-84 315.8 277 58.8
Solyc06g051410.4 Solanum lycopersicum HOM05D005616 ORTHO05D006975 3.2e-84 315.8 276 62.0
Gohir.A10G237500 Gossypium hirsutum HOM05D005616 ORTHO05D006975 4.1e-84 315.5 257 64.2
PSO339G0515 Papaver somniferum HOM05D005616 ORTHO05D006975 4.1e-84 315.5 279 60.6
DCAR_023439 Daucus carota HOM05D005616 ORTHO05D006975 7.1e-84 314.7 246 65.4
Sopen06g017380 Solanum pennellii HOM05D005616 ORTHO05D006975 9.2e-84 314.3 269 62.8
MELO3C026789.2 Cucumis melo HOM05D005616 ORTHO05D006975 1.2e-83 313.9 236 67.4
PGSC0003DMG401008474 Solanum tuberosum HOM05D005616 ORTHO05D006975 1.2e-83 313.9 269 63.2
arahy.Tifrunner.gnm1.ann1.R92L2M Arachis hypogaea HOM05D005616 ORTHO05D006975 1.6e-83 313.5 205 74.1
BcaB05g21694 Brassica carinata HOM05D005616 ORTHO05D006975 1.6e-83 313.5 275 59.3
CARHR034480 Cardamine hirsuta HOM05D005616 ORTHO05D006975 1.6e-83 313.5 252 63.1
PSO017G0320 Papaver somniferum HOM05D005616 ORTHO05D006975 2.1e-83 313.2 221 70.1
Sc10g0002410 Simmondsia chinensis HOM05D005616 ORTHO05D006975 2.1e-83 313.2 276 58.3
BcaB05g21698 Brassica carinata HOM05D005616 ORTHO05D006975 2.7e-83 312.8 277 59.6
SGA_v2.0_scaffold60G21012 Striga asiatica HOM05D005616 ORTHO05D006975 6.0e-83 311.6 224 69.2
arahy.Tifrunner.gnm1.ann1.061K9L Arachis hypogaea HOM05D005616 ORTHO05D006975 7.8e-83 311.2 204 74.5
SGA_v2.0_scaffold105G30487 Striga asiatica HOM05D005616 ORTHO05D006975 3.0e-82 309.3 217 70.5
SalBow6G5046 Salvia bowleyana HOM05D005616 ORTHO05D006975 3.9e-82 308.9 234 65.8
AUR62012260 Chenopodium quinoa HOM05D005616 ORTHO05D006975 6.6e-82 308.1 220 68.6
BraA02t04856Z Brassica rapa HOM05D005616 ORTHO05D006975 2.5e-81 306.2 275 57.8
EL10Ac1g02124 Beta vulgaris HOM05D005616 ORTHO05D006975 3.3e-81 305.8 222 68.5
CANSAT78G1638 Cannabis sativa HOM05D005616 ORTHO05D006975 3.3e-81 305.8 252 62.7
Aqoxy4G02536 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 7.3e-81 304.7 286 60.5
CSS0002000 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 8.1e-80 301.2 207 71.0
AUR62022893 Chenopodium quinoa HOM05D005616 ORTHO05D006975 1.1e-79 300.8 227 65.6
PGR044G0338 Punica granatum HOM05D005616 ORTHO05D006975 2.4e-79 299.7 204 74.0
BolC2t06207H Brassica oleracea HOM05D005616 ORTHO05D006975 9.0e-79 297.7 275 56.4
Gorai.011G289500 Gossypium raimondii HOM05D005616 ORTHO05D006975 1.2e-78 297.4 276 58.3
CSS0019139 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 2.0e-78 296.6 207 70.5
Gohir.D10G249200 Gossypium hirsutum HOM05D005616 ORTHO05D006975 2.6e-78 296.2 276 58.3
Gohir.D04G132700 Gossypium hirsutum HOM05D005616 ORTHO05D006975 4.4e-78 295.4 245 62.0
MBI19_g36756_MAGBIO Magnolia biondii HOM05D005616 ORTHO05D006975 3.8e-77 292.4 218 67.0
Nitab4.5_0010803g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 4.9e-77 292.0 205 73.7
Hund13869 Selenicereus undatus HOM05D005616 ORTHO05D006975 6.4e-77 291.6 218 66.1
SHI03421 Sapria himalayana HOM05D005616 ORTHO05D006975 1.2e-75 287.3 236 60.6
ATR0730G169 Amborella trichopoda HOM05D005616 ORTHO05D006975 1.8e-71 273.5 224 61.6
Aqoxy5G03614 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 4.0e-71 272.3 196 71.4
AUR62028615 Chenopodium quinoa HOM05D005616 ORTHO05D006975 3.2e-68 262.7 236 59.3
HPP92_011508 Vanilla planifolia HOM05D005616 ORTHO05D006975 5.4e-68 261.9 233 57.5
unitig_0.g2023 Utricularia gibba HOM05D005616 ORTHO05D006975 1.2e-67 260.8 186 68.8
SEGI_33372 Sequoiadendron giganteum HOM05D005616 ORTHO05D006975 3.5e-67 259.2 206 62.6
Zm00001eb203980 Zea mays HOM05D005616 ORTHO05D006975 2.5e-65 253.1 244 57.0
Os02g0266000 Oryza sativa ssp. japonica HOM05D005616 ORTHO05D006975 7.4e-65 251.5 208 61.1
TAR369G1110 Trochodendron aralioides HOM05D005616 ORTHO05D006975 8.1e-64 248.1 213 61.0
Zm00001eb281510 Zea mays HOM05D005616 ORTHO05D006975 1.3e-61 240.7 238 53.8
Pp3c17_23550 Physcomitrium patens HOM05D005616 ORTHO05D006975 2.1e-56 223.4 210 55.2
Aqoxy332s005 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 8.2e-56 221.5 182 65.9
Mapoly0041s0067 Marchantia polymorpha HOM05D005616 ORTHO05D006975 8.2e-56 221.5 207 53.6
AagrBONN_evm.TU.Sc2ySwM_228.1039 Anthoceros agrestis HOM05D005616 ORTHO05D006975 5.8e-54 215.3 209 52.2
CAN.G370.83 Capsicum annuum HOM05D002257 ORTHO05D006975 8.4e-53 211.5 198 60.1
SMO364G0619 Selaginella moellendorffii HOM05D005616 ORTHO05D006975 1.6e-51 207.2 212 52.4
AT1G29410 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 4.6e-51 205.7 212 51.4
CDE02G4500 Ceratophyllum demersum HOM05D005293 ORTHO05D006764 1.8e-50 203.8 196 56.1
C02p02440 Brassica napus HOM05D005616 ORTHO05D006975 1.4e-47 194.1 199 52.8
Cre12.g519000 Chlamydomonas reinhardtii HOM05D005616 ORTHO05D006975 6.9e-47 191.8 224 43.8
Dinv21739 Davidia involucrata HOM05D005616 ORTHO05D006975 5.0e-45 185.7 125 68.8
MCO02G328 Micromonas commoda HOM05D005616 ORTHO05D006975 2.7e-43 179.9 233 40.3
Potri.014G188400 Populus trichocarpa HOM05D005616 ORTHO05D006975 8.8e-42 174.9 130 72.3
PRCOL_00006470 Prasinoderma coloniale HOM05D005616 ORTHO05D006975 1.4e-36 157.5 212 41.0
CiPaw.01G059100 Carya illinoinensis HOM05D005616 ORTHO05D006975 7.2e-36 155.2 109 70.6
FAN17G0984 Fragaria x ananassa HOM05D002859 ORTHO05D003120 1.9e-28 130.6 139 52.5
Nn2g13147 Nelumbo nucifera HOM05D005616 ORTHO05D006975 1.9e-28 130.6 88 75.0
DCAR_029632 Daucus carota HOM05D000090 ORTHO05D001584 9.1e-23 111.7 104 56.7
CBR_g37169 Chara braunii HOM05D005616 ORTHO05D006975 9.4e-20 101.7 144 39.6
MSTRG.13829 Avicennia marina HOM05D005616 ORTHO05D006975 1.8e-18 97.4 80 67.5
Atru.chr12.48 Acer truncatum HOM05D005616 ORTHO05D006975 1.5e-17 94.4 110 49.1
Dinv21738 Davidia involucrata HOM05D005616 ORTHO05D006975 1.2e-14 84.7 139 44.6
Atru.chr7.2145 Acer truncatum HOM05D005616 ORTHO05D006975 4.4e-09 66.2 52 67.3
SGA_v2.0_scaffold250G44984 Striga asiatica HOM05D005616 ORTHO05D401959 8.3e-08 62.0 60 53.3


User provided reference genes

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