Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra08G0045200 Salix brachista HOM05D006892 ORTHO05D008592 1.1e-40 169.5 80 100.0
Potri.010G196500 Populus trichocarpa HOM05D006892 ORTHO05D008592 4.5e-31 137.5 81 77.8
Potri.008G061600 Populus trichocarpa HOM05D006892 ORTHO05D008592 2.3e-27 125.2 110 59.1
Sabra10G0151100 Salix brachista HOM05D006892 ORTHO05D008592 2.0e-26 122.1 79 72.2
Manes.07G122400 Manihot esculenta HOM05D006892 ORTHO05D008592 4.4e-18 94.4 85 60.0
GSVIVG01016437001 Vitis vinifera HOM05D006892 ORTHO05D008592 2.6e-15 85.1 77 51.9
Dinv37115 Davidia involucrata HOM05D006892 ORTHO05D008592 7.7e-15 83.6 78 55.1
MD12G1154700 Malus domestica HOM05D006892 ORTHO05D008592 7.7e-15 83.6 82 52.4
Manes.10G021300 Manihot esculenta HOM05D006892 ORTHO05D008592 1.0e-14 83.2 70 57.1
Haze_18710 Corylus avellana HOM05D006892 ORTHO05D008592 1.7e-14 82.4 67 58.2
Haze_20883 Corylus avellana HOM05D006892 ORTHO05D008592 6.5e-14 80.5 79 50.6
Haze_20892 Corylus avellana HOM05D006892 ORTHO05D008592 6.5e-14 80.5 79 50.6
CiPaw.01G293100 Carya illinoinensis HOM05D006892 ORTHO05D008592 1.1e-13 79.7 68 54.4
Haze_17148 Corylus avellana HOM05D000015 ORTHO05D000270 1.5e-13 79.3 67 56.7
Haze_17150 Corylus avellana HOM05D006892 ORTHO05D008592 3.2e-13 78.2 69 53.6
FAN05G3252 Fragaria x ananassa HOM05D006892 ORTHO05D008592 3.2e-13 78.2 80 52.5
Hma1.2p1_0039F.1_g024865 Hydrangea macrophylla HOM05D006892 ORTHO05D008592 4.2e-13 77.8 68 52.9
Hma1.2p1_0039F.1_g024870 Hydrangea macrophylla HOM05D006892 ORTHO05D008592 4.2e-13 77.8 68 52.9
FAN14G5964 Fragaria x ananassa HOM05D006892 ORTHO05D008592 5.5e-13 77.4 80 51.2
FvH4_6g12730 Fragaria vesca HOM05D006892 ORTHO05D008592 7.2e-13 77.0 80 51.2
Medtr7g065130 Medicago truncatula HOM05D006892 ORTHO05D008592 7.2e-13 77.0 80 47.5
FAN09G3730 Fragaria x ananassa HOM05D006892 ORTHO05D008592 1.2e-12 76.3 80 51.2
Lalb_Chr03g0042701 Lupinus albus HOM05D006892 ORTHO05D008592 1.2e-12 76.3 82 50.0
Dinv34454 Davidia involucrata HOM05D006892 ORTHO05D008592 1.6e-12 75.9 69 52.2
Glyma.01G105400 Glycine max HOM05D006892 ORTHO05D008592 1.6e-12 75.9 72 50.0
Ciclev10033223m.g Citrus clementina HOM05D006892 ORTHO05D008592 2.1e-12 75.5 72 51.4
FAN02G3144 Fragaria x ananassa HOM05D006892 ORTHO05D008592 2.1e-12 75.5 80 50.0
Lalb_Chr19g0125031 Lupinus albus HOM05D006892 ORTHO05D008592 2.1e-12 75.5 82 48.8
Prupe.6G264500 Prunus persica HOM05D006892 ORTHO05D008592 2.1e-12 75.5 82 48.8
TAR636G2473 Trochodendron aralioides HOM05D006892 ORTHO05D008592 2.1e-12 75.5 74 52.7
Cfa001402 Carpinus fangiana HOM05D006892 ORTHO05D008592 3.6e-12 74.7 68 52.9
Psat3g133520 Pisum sativum HOM05D006892 ORTHO05D008592 3.6e-12 74.7 72 51.4
RcHm_v2.0_Chr3g0464651 Rosa chinensis HOM05D006892 ORTHO05D008592 4.7e-12 74.3 80 48.8
TAR633G0729 Trochodendron aralioides HOM05D006892 ORTHO05D008592 4.7e-12 74.3 71 56.3
Thecc.05G029200 Theobroma cacao HOM05D006892 ORTHO05D008592 8.0e-12 73.6 78 48.7
Glyma.07G139200 Glycine max HOM05D006892 ORTHO05D008592 1.0e-11 73.2 73 47.9
TPR.G34921 Trifolium pratense HOM05D006892 ORTHO05D008592 1.4e-11 72.8 75 48.0
Glyma.18G189800 Glycine max HOM05D006892 ORTHO05D008592 1.8e-11 72.4 73 46.6
Lj1g0020029 Lotus japonicus HOM05D006892 ORTHO05D008592 1.8e-11 72.4 74 48.6
MBI05_g02667_MAGBIO Magnolia biondii HOM05D006892 ORTHO05D008592 1.8e-11 72.4 71 49.3
Glyma.04G105400 Glycine max HOM05D006892 ORTHO05D008592 2.3e-11 72.0 72 45.8
Nn2g13528 Nelumbo nucifera HOM05D006892 ORTHO05D008592 2.3e-11 72.0 76 52.6
Atru.chr12.266 Acer truncatum HOM05D006892 ORTHO05D008592 5.2e-11 70.9 80 55.0
COL.COLO4_14695 Corchorus olitorius HOM05D006892 ORTHO05D008592 5.2e-11 70.9 83 47.0
TAR623G0452 Trochodendron aralioides HOM05D006892 ORTHO05D008592 5.2e-11 70.9 70 50.0
Glyma.03G073200 Glycine max HOM05D006892 ORTHO05D008592 8.8e-11 70.1 83 45.8
Gohir.D04G125400 Gossypium hirsutum HOM05D006892 ORTHO05D008592 8.8e-11 70.1 78 48.7
Gorai.012G108500 Gossypium raimondii HOM05D006892 ORTHO05D008592 8.8e-11 70.1 78 48.7
Lj3g0005144 Lotus japonicus HOM05D006892 ORTHO05D008592 1.5e-10 69.3 77 42.9
MBI14_g02865_MAGBIO Magnolia biondii HOM05D006892 ORTHO05D008592 1.5e-10 69.3 70 47.1
Gohir.A09G152400 Gossypium hirsutum HOM05D006892 ORTHO05D008592 2.6e-10 68.6 78 46.2
Gohir.D09G148100 Gossypium hirsutum HOM05D006892 ORTHO05D008592 2.6e-10 68.6 78 46.2
Gorai.006G169100 Gossypium raimondii HOM05D006892 ORTHO05D008592 2.6e-10 68.6 78 46.2
MD04G1138900 Malus domestica HOM05D006892 ORTHO05D008592 2.6e-10 68.6 82 48.8
CSS0011916 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 3.3e-10 68.2 73 49.3
Phvul.010G009200 Phaseolus vulgaris HOM05D006892 ORTHO05D008592 4.4e-10 67.8 80 42.5
Atru.chr8.2090 Acer truncatum HOM05D006892 ORTHO05D008592 5.7e-10 67.4 69 44.9
Gorai.011G273300 Gossypium raimondii HOM05D006892 ORTHO05D008592 7.5e-10 67.0 72 48.6
COL.COLO4_36543 Corchorus olitorius HOM05D006892 ORTHO05D008592 1.7e-09 65.9 64 46.9
MBI14_g02866_MAGBIO Magnolia biondii HOM05D006892 ORTHO05D008592 1.7e-09 65.9 70 44.3
TPR.G32561 Trifolium pratense HOM05D006892 ORTHO05D008592 2.8e-09 65.1 82 41.5
CSS0005500 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 3.7e-09 64.7 79 45.6
CSS0020330 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 3.7e-09 64.7 78 46.2
Gohir.D10G238364 Gossypium hirsutum HOM05D006892 ORTHO05D008592 4.8e-09 64.3 68 47.1
Gohir.A04G085600 Gossypium hirsutum HOM05D006892 ORTHO05D008592 6.3e-09 63.9 74 47.3
CSS0009632 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 8.2e-09 63.5 78 46.2
Phvul.001G238200 Phaseolus vulgaris HOM05D006892 ORTHO05D008592 8.2e-09 63.5 79 39.2
Gohir.A10G225300 Gossypium hirsutum HOM05D006892 ORTHO05D008592 1.1e-08 63.2 68 48.5
Sed0015200 Sechium edule HOM05D006892 ORTHO05D008592 1.1e-08 63.2 74 47.3
Psat7g241320 Pisum sativum HOM05D006892 ORTHO05D008592 1.8e-08 62.4 81 40.7
Thecc.10G031400 Theobroma cacao HOM05D006892 ORTHO05D008592 2.4e-08 62.0 68 45.6
Ciclev10013234m.g Citrus clementina HOM05D006892 ORTHO05D008592 3.1e-08 61.6 78 41.0
Manes.09G098400 Manihot esculenta HOM05D006892 ORTHO05D008592 3.1e-08 61.6 73 49.3
DCAR_028810 Daucus carota HOM05D006892 ORTHO05D008592 4.1e-08 61.2 43 53.5
Lsat_1_v5_gn_9_32981 Lactuca sativa HOM05D006892 ORTHO05D008592 4.1e-08 61.2 76 40.8
Eucgr.G02995 Eucalyptus grandis HOM05D006892 ORTHO05D008592 5.3e-08 60.8 69 44.9
HPP92_019858 Vanilla planifolia HOM05D006892 ORTHO05D008592 7.0e-08 60.5 74 44.6
SalBow6G4181 Salvia bowleyana HOM05D061281 ORTHO05D008592 9.1e-08 60.1 67 40.3
SalBow6G4537 Salvia bowleyana HOM05D061281 ORTHO05D008592 9.1e-08 60.1 67 40.3
Potri.006G092300 Populus trichocarpa HOM05D006892 ORTHO05D008592 1.2e-07 59.7 57 43.9
Eucgr.G02997 Eucalyptus grandis HOM05D006892 ORTHO05D008592 1.6e-07 59.3 69 43.5
Actinidia02903 Actinidia chinensis HOM05D006892 ORTHO05D008592 2.0e-07 58.9 86 36.0
Glyma.18G033400 Glycine max HOM05D006892 ORTHO05D008592 2.7e-07 58.5 74 40.5
Sabra06G0070000 Salix brachista HOM05D006892 ORTHO05D008592 3.5e-07 58.2 57 42.1
arahy.Tifrunner.gnm1.ann1.KB6CC9 Arachis hypogaea HOM05D006892 ORTHO05D008592 4.5e-07 57.8 55 45.5
arahy.Tifrunner.gnm1.ann1.KX701I Arachis hypogaea HOM05D006892 ORTHO05D008592 4.5e-07 57.8 55 45.5
Sopen09g006180 Solanum pennellii HOM05D006892 ORTHO05D008592 4.5e-07 57.8 77 44.2
PGSC0003DMG400024270 Solanum tuberosum HOM05D006892 ORTHO05D008592 7.7e-07 57.0 80 38.8
HanXRQChr08g0221291 Helianthus annuus HOM05D006892 ORTHO05D008592 1.0e-06 56.6 74 40.5
Cpa.g.sc19.256 Carica papaya HOM05D006892 ORTHO05D008592 1.3e-06 56.2 72 38.9
CiPaw.09G201300 Carya illinoinensis HOM05D006892 ORTHO05D008592 1.3e-06 56.2 85 41.2
CDE02G2266 Ceratophyllum demersum HOM05D006892 ORTHO05D008592 1.3e-06 56.2 74 43.2
Lj6g0007525 Lotus japonicus HOM05D006892 ORTHO05D008592 1.3e-06 56.2 75 41.3
Medtr3g069540 Medicago truncatula HOM05D006892 ORTHO05D008592 1.3e-06 56.2 75 38.7
TPR.G33720 Trifolium pratense HOM05D006892 ORTHO05D008592 1.7e-06 55.8 79 35.4
MBI14_g02869_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.2e-06 55.5 46 50.0
HanXRQChr05g0156901 Helianthus annuus HOM05D006892 ORTHO05D008592 3.8e-06 54.7 78 37.2
CiPaw.10G149300 Carya illinoinensis HOM05D006892 ORTHO05D008592 5.0e-06 54.3 73 39.7
Potri.016G103900 Populus trichocarpa HOM05D006892 ORTHO05D008592 5.0e-06 54.3 54 44.4
ClCG04G007580 Citrullus lanatus HOM05D006892 ORTHO05D008592 6.5e-06 53.9 43 51.2


User provided reference genes

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