Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra08G0038500 Salix brachista HOM05D002139 ORTHO05D002264 6.3e-42 173.7 89 100.0
Sabra16G0068800 Salix brachista HOM05D002139 ORTHO05D002264 7.7e-24 113.6 66 90.9
Potri.016G067800 Populus trichocarpa HOM05D002139 ORTHO05D002264 3.2e-22 108.2 66 86.4
Potri.006G201400 Populus trichocarpa HOM05D002139 ORTHO05D002264 1.6e-16 89.4 55 83.6
CSS0025933 Camellia sinensis var. sinensis HOM05D002139 ORTHO05D002264 3.4e-11 71.6 55 63.6
CSS0027061 Camellia sinensis var. sinensis HOM05D002139 ORTHO05D002264 1.3e-10 69.7 55 61.8
CiPaw.10G019300 Carya illinoinensis HOM05D002139 ORTHO05D002264 2.2e-10 68.9 80 50.0
Dinv12355 Davidia involucrata HOM05D002139 ORTHO05D002264 1.1e-09 66.6 54 59.3
Duzib093G2229 Durio zibethinus HOM05D002139 ORTHO05D002264 1.1e-09 66.6 80 47.5
Sabra06G0155100 Salix brachista HOM05D002139 ORTHO05D002264 1.4e-09 66.2 37 86.5
Manes.08G035400 Manihot esculenta HOM05D002139 ORTHO05D002264 1.8e-09 65.9 80 51.2
Cpa.g.sc1467.2 Carica papaya HOM05D002139 ORTHO05D002264 3.1e-09 65.1 59 54.2
Dinv31779 Davidia involucrata HOM05D002139 ORTHO05D002264 7.0e-09 63.9 61 54.1
MD03G1159400 Malus domestica HOM05D002139 ORTHO05D002264 7.0e-09 63.9 53 58.5
CsaV3_1G044000 Cucumis sativus L. HOM05D002139 ORTHO05D002264 9.2e-09 63.5 58 50.0
Actinidia37762 Actinidia chinensis HOM05D002139 ORTHO05D002264 1.6e-08 62.8 55 58.2
Eucgr.J00584 Eucalyptus grandis HOM05D002139 ORTHO05D002264 1.6e-08 62.8 59 52.5
Eucgr.A02564 Eucalyptus grandis HOM05D002139 ORTHO05D002264 2.0e-08 62.4 89 46.1
Gohir.A05G077500 Gossypium hirsutum HOM05D002139 ORTHO05D002264 2.0e-08 62.4 62 53.2
Thecc.05G107700 Theobroma cacao HOM05D002139 ORTHO05D002264 2.0e-08 62.4 86 45.3
Dinv18855 Davidia involucrata HOM05D002139 ORTHO05D002264 4.5e-08 61.2 61 49.2
Gohir.D05G080300 Gossypium hirsutum HOM05D002139 ORTHO05D002264 5.9e-08 60.8 65 55.4
RcHm_v2.0_Chr5g0049041 Rosa chinensis HOM05D002139 ORTHO05D002264 5.9e-08 60.8 50 62.0
COL.COLO4_29527 Corchorus olitorius HOM05D002139 ORTHO05D002264 7.8e-08 60.5 79 43.0
Gorai.009G394500 Gossypium raimondii HOM05D002139 ORTHO05D002264 7.8e-08 60.5 53 52.8
Nn2g14365 Nelumbo nucifera HOM05D002139 ORTHO05D002264 7.8e-08 60.5 69 49.3
CiPaw.09G022200 Carya illinoinensis HOM05D002139 ORTHO05D002264 1.0e-07 60.1 81 48.1
MELO3C009994.2 Cucumis melo HOM05D002139 ORTHO05D002264 1.0e-07 60.1 58 46.6
Gorai.009G082000 Gossypium raimondii HOM05D002139 ORTHO05D002264 1.0e-07 60.1 62 53.2
PGR142G1998 Punica granatum HOM05D002139 ORTHO05D002264 1.0e-07 60.1 80 46.2
PGR119G2506 Punica granatum HOM05D002139 ORTHO05D002264 1.7e-07 59.3 60 51.7
Zm00001eb117430 Zea mays HOM05D002139 ORTHO05D002264 1.7e-07 59.3 77 45.5
Zm00001eb300320 Zea mays HOM05D002139 ORTHO05D002264 1.7e-07 59.3 86 39.5
CAN.G674.12 Capsicum annuum HOM05D002139 ORTHO05D002264 2.3e-07 58.9 55 56.4
Gohir.D04G092600 Gossypium hirsutum HOM05D002139 ORTHO05D002264 2.3e-07 58.9 80 42.5
Prupe.7G092100 Prunus persica HOM05D002139 ORTHO05D002264 2.3e-07 58.9 86 44.2
Actinidia07288 Actinidia chinensis HOM05D002139 ORTHO05D002264 2.9e-07 58.5 61 49.2
CiPaw.13G120500 Carya illinoinensis HOM05D002139 ORTHO05D002264 2.9e-07 58.5 56 60.7
Gohir.A04G055400 Gossypium hirsutum HOM05D002139 ORTHO05D002264 3.9e-07 58.2 80 42.5
Rhsim13G0197700 Rhododendron simsii HOM05D002139 ORTHO05D002264 3.9e-07 58.2 73 46.6
Thecc.09G270000 Theobroma cacao HOM05D002139 ORTHO05D002264 3.9e-07 58.2 62 50.0
FAN05G4464 Fragaria x ananassa HOM05D002139 ORTHO05D002264 5.0e-07 57.8 64 45.3
Peaxi162Scf00083g02016 Petunia axillaris HOM05D002139 ORTHO05D002264 5.0e-07 57.8 64 50.0
PGSC0003DMG402028141 Solanum tuberosum HOM05D002139 ORTHO05D002264 5.0e-07 57.8 62 51.6
Haze_23589 Corylus avellana HOM05D002139 ORTHO05D002264 6.6e-07 57.4 71 47.9
FvH4_3g26160 Fragaria vesca HOM05D002139 ORTHO05D002264 6.6e-07 57.4 50 58.0
FvH4_6g20650 Fragaria vesca HOM05D002139 ORTHO05D002264 6.6e-07 57.4 64 45.3
FAN02G1727 Fragaria x ananassa HOM05D002139 ORTHO05D002264 6.6e-07 57.4 64 45.3
FAN05G0316 Fragaria x ananassa HOM05D002139 ORTHO05D002264 6.6e-07 57.4 64 45.3
FAN09G2846 Fragaria x ananassa HOM05D002139 ORTHO05D002264 6.6e-07 57.4 64 45.3
FAN11G0931 Fragaria x ananassa HOM05D002139 ORTHO05D002264 6.6e-07 57.4 50 58.0
FAN14G5094 Fragaria x ananassa HOM05D002139 ORTHO05D002264 6.6e-07 57.4 64 45.3
Gorai.001G126400 Gossypium raimondii HOM05D002139 ORTHO05D002264 6.6e-07 57.4 62 56.5
Hma1.2p1_0064F.1_g034550 Hydrangea macrophylla HOM05D002139 ORTHO05D002264 6.6e-07 57.4 56 55.4
Prupe.6G147100 Prunus persica HOM05D002139 ORTHO05D002264 6.6e-07 57.4 53 54.7
Prupe.7G023800 Prunus persica HOM05D002139 ORTHO05D002264 6.6e-07 57.4 56 57.1
RcHm_v2.0_Chr3g0476531 Rosa chinensis HOM05D002139 ORTHO05D002264 6.6e-07 57.4 64 45.3
Sed0012069 Sechium edule HOM05D002139 ORTHO05D002264 6.6e-07 57.4 55 49.1
TWI53G0030 Tripterygium wilfordii HOM05D002139 ORTHO05D002264 6.6e-07 57.4 79 43.0
TAR369G0016 Trochodendron aralioides HOM05D002139 ORTHO05D002264 6.6e-07 57.4 50 58.0
Duzib170G0994 Durio zibethinus HOM05D002139 ORTHO05D002264 8.6e-07 57.0 62 50.0
Gohir.D07G117500 Gossypium hirsutum HOM05D002139 ORTHO05D002264 8.6e-07 57.0 62 53.2
Lj1A437T6 Lonicera japonica HOM05D002139 ORTHO05D002264 8.6e-07 57.0 79 41.8
Lj1C435G7 Lonicera japonica HOM05D002139 ORTHO05D002264 8.6e-07 57.0 79 41.8
Solyc10g081810.3 Solanum lycopersicum HOM05D002139 ORTHO05D002264 8.6e-07 57.0 62 50.0
Sopen10g032330 Solanum pennellii HOM05D002139 ORTHO05D002264 8.6e-07 57.0 62 50.0
GSVIVG01022566001 Vitis vinifera HOM05D002139 ORTHO05D002264 8.6e-07 57.0 81 48.1
Atru.chr8.1316 Acer truncatum HOM05D002139 ORTHO05D002264 1.1e-06 56.6 89 42.7
Ciclev10013007m.g Citrus clementina HOM05D002139 ORTHO05D002264 1.1e-06 56.6 87 44.8
COL.COLO4_25392 Corchorus olitorius HOM05D002139 ORTHO05D002264 1.1e-06 56.6 61 54.1
Duzib106G1445 Durio zibethinus HOM05D002139 ORTHO05D002264 1.1e-06 56.6 95 42.1
Manes.11G103750 Manihot esculenta HOM05D002139 ORTHO05D002264 1.1e-06 56.6 77 44.2
Glyma.12G095800 Glycine max HOM05D002139 ORTHO05D002264 1.5e-06 56.2 64 53.1
Lalb_Chr02g0154331 Lupinus albus HOM05D002139 ORTHO05D002264 1.5e-06 56.2 86 39.5
MSTRG.19337 Avicennia marina HOM05D002139 ORTHO05D002264 1.9e-06 55.8 64 46.9
Cfa010209 Carpinus fangiana HOM05D002139 ORTHO05D002264 1.9e-06 55.8 54 55.6
MBI11_g04609_MAGBIO Magnolia biondii HOM05D002139 ORTHO05D002264 1.9e-06 55.8 67 49.3
Actinidia24264 Actinidia chinensis HOM05D002139 ORTHO05D002264 2.5e-06 55.5 61 47.5
FAN21G1364 Fragaria x ananassa HOM05D002139 ORTHO05D002264 2.5e-06 55.5 50 56.0
Nitab4.5_0000473g0030 Nicotiana tabacum HOM05D002139 ORTHO05D002264 2.5e-06 55.5 64 50.0
Nitab4.5_0000721g0250 Nicotiana tabacum HOM05D002139 ORTHO05D002264 2.5e-06 55.5 79 41.8
QL01p019275 Quercus lobata HOM05D002139 ORTHO05D002264 2.5e-06 55.5 56 57.1
VMungo0720G0286 Vigna mungo HOM05D002139 ORTHO05D002264 2.5e-06 55.5 80 46.2
Sc07g0006390 Simmondsia chinensis HOM05D002139 ORTHO05D002264 3.3e-06 55.1 57 50.9
GSVIVG01036048001 Vitis vinifera HOM05D002139 ORTHO05D002264 3.3e-06 55.1 62 43.5
Actinidia06185 Actinidia chinensis HOM05D002139 ORTHO05D002264 4.3e-06 54.7 61 45.9
Sc24g0002480 Simmondsia chinensis HOM05D002139 ORTHO05D002264 4.3e-06 54.7 55 50.9
Solyc10g081800.2 Solanum lycopersicum HOM05D002139 ORTHO05D002264 4.3e-06 54.7 55 50.9
ATR0697G252 Amborella trichopoda HOM05D002139 ORTHO05D002264 5.6e-06 54.3 47 55.3
CDE07G0340 Ceratophyllum demersum HOM05D002139 ORTHO05D002264 5.6e-06 54.3 57 49.1
Gohir.A07G113800 Gossypium hirsutum HOM05D002139 ORTHO05D002264 5.6e-06 54.3 62 54.8
Nn6g34623 Nelumbo nucifera HOM05D002139 ORTHO05D002264 5.6e-06 54.3 61 45.9
PSO384G1674 Papaver somniferum HOM05D002139 ORTHO05D002264 5.6e-06 54.3 56 51.8
Rhsim01G0068700 Rhododendron simsii HOM05D002139 ORTHO05D002264 5.6e-06 54.3 58 53.4
Glyma.10G083300 Glycine max HOM05D002139 ORTHO05D002264 7.3e-06 53.9 86 39.5
Lalb_Chr06g0172701 Lupinus albus HOM05D002139 ORTHO05D002264 7.3e-06 53.9 77 42.9
MD12G1042800 Malus domestica HOM05D002139 ORTHO05D002264 7.3e-06 53.9 80 46.2
Medtr1g055435 Medicago truncatula HOM05D002139 ORTHO05D002264 7.3e-06 53.9 78 43.6
PGR004G2773 Punica granatum HOM05D002139 ORTHO05D002264 7.3e-06 53.9 90 44.4
CANSAT54G2328 Cannabis sativa HOM05D002139 ORTHO05D002264 9.5e-06 53.5 53 52.8
CANSAT64G0105 Cannabis sativa HOM05D002139 ORTHO05D002264 9.5e-06 53.5 52 51.9
CANSAT64G2342 Cannabis sativa HOM05D002139 ORTHO05D002264 9.5e-06 53.5 52 51.9
Glyma.13G311500 Glycine max HOM05D002139 ORTHO05D002264 9.5e-06 53.5 45 51.1
Oeu020192.1 Olea europaea HOM05D002139 ORTHO05D002264 9.5e-06 53.5 70 47.1


User provided reference genes

Program Settings