Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra08G0033900 Salix brachista HOM05D007397 ORTHO05D009336 2.3e-97 359.0 198 100.0
Potri.008G047800 Populus trichocarpa HOM05D007397 ORTHO05D009336 8.7e-84 313.9 200 88.5
Potri.010G213600 Populus trichocarpa HOM05D007397 ORTHO05D009336 4.9e-71 271.6 196 81.1
PGR142G1402 Punica granatum HOM05D007397 ORTHO05D009336 4.6e-53 211.8 206 64.6
Cpa.g.sc1.304 Carica papaya HOM05D007397 ORTHO05D009336 7.9e-53 211.1 182 66.5
Hma1.2p1_0348F.1_g131665 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 7.9e-53 211.1 199 65.8
Hma1.2p1_0348F.1_g131670 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 7.9e-53 211.1 199 65.8
Cfa001558 Carpinus fangiana HOM05D007397 ORTHO05D009336 3.9e-52 208.8 199 64.8
Gorai.011G244600 Gossypium raimondii HOM05D007397 ORTHO05D009336 3.9e-52 208.8 200 66.5
Cc02_g08640 Coffea canephora HOM05D007397 ORTHO05D009336 5.1e-52 208.4 205 60.0
Gohir.D10G218000 Gossypium hirsutum HOM05D007397 ORTHO05D009336 8.7e-52 207.6 200 62.0
Haze_16973 Corylus avellana HOM05D007397 ORTHO05D009336 1.5e-51 206.8 204 61.3
TWI38G1005 Tripterygium wilfordii HOM05D007397 ORTHO05D009336 4.3e-51 205.3 196 60.2
CSS0023256 Camellia sinensis var. sinensis HOM05D007397 ORTHO05D009336 1.3e-50 203.8 194 61.9
SGA_v2.0_scaffold165G38243 Striga asiatica HOM05D007397 ORTHO05D009336 1.6e-50 203.4 184 60.3
Oeu044824.1 Olea europaea HOM05D007397 ORTHO05D009336 3.7e-50 202.2 195 59.0
ClCG09G020320 Citrullus lanatus HOM05D007397 ORTHO05D009336 1.8e-49 199.9 191 60.7
CiPaw.01G279900 Carya illinoinensis HOM05D007397 ORTHO05D009336 9.0e-49 197.6 200 61.0
Lj5g0010768 Lotus japonicus HOM05D007397 ORTHO05D009336 9.0e-49 197.6 192 56.8
CANSAT64G2695 Cannabis sativa HOM05D007397 ORTHO05D009336 1.5e-48 196.8 194 55.7
MSTRG.7898 Avicennia marina HOM05D007397 ORTHO05D009336 1.0e-47 194.1 192 56.8
GSVIVG01032626001 Vitis vinifera HOM05D007397 ORTHO05D009336 1.0e-47 194.1 213 56.8
Thecc.10G062300 Theobroma cacao HOM05D007397 ORTHO05D009336 1.3e-47 193.7 202 62.4
MELO3C025487.2 Cucumis melo HOM05D007397 ORTHO05D009336 2.2e-47 193.0 191 58.6
Gohir.A10G209700 Gossypium hirsutum HOM05D007397 ORTHO05D009336 2.2e-47 193.0 199 62.8
PGSC0003DMG400011470 Solanum tuberosum HOM05D007397 ORTHO05D009336 2.9e-47 192.6 194 58.2
Glyma.04G095200 Glycine max HOM05D007397 ORTHO05D009336 5.0e-47 191.8 194 57.7
QL08p057549 Quercus lobata HOM05D007397 ORTHO05D009336 6.5e-47 191.4 212 60.4
Sopen04g005370 Solanum pennellii HOM05D007397 ORTHO05D009336 8.5e-47 191.0 196 60.2
FAN01G1406 Fragaria x ananassa HOM05D007397 ORTHO05D009336 1.1e-46 190.7 188 59.6
Actinidia38224 Actinidia chinensis HOM05D007397 ORTHO05D009336 1.9e-46 189.9 187 59.9
Thhalv10021616m.g Eutrema salsugineum HOM05D007397 ORTHO05D009336 1.9e-46 189.9 155 67.1
FAN03G3257 Fragaria x ananassa HOM05D007397 ORTHO05D009336 1.9e-46 189.9 188 55.3
MD07G1184800 Malus domestica HOM05D007397 ORTHO05D009336 3.2e-46 189.1 204 59.3
FAN01G1537 Fragaria x ananassa HOM05D007397 ORTHO05D009336 4.2e-46 188.7 188 59.0
Glyma.06G097000 Glycine max HOM05D007397 ORTHO05D009336 7.2e-46 188.0 196 54.6
Ca_11323_v3 Cicer arietinum L. HOM05D007397 ORTHO05D009336 9.4e-46 187.6 192 55.7
AT3G12345 Arabidopsis thaliana HOM05D007397 ORTHO05D009336 1.2e-45 187.2 176 61.9
Solyc04g010190.1 Solanum lycopersicum HOM05D007397 ORTHO05D009336 1.2e-45 187.2 194 58.2
Carub.0003s1170 Capsella rubella HOM05D007397 ORTHO05D009336 2.1e-45 186.4 176 61.9
Sp3g10540 Schrenkiella parvula HOM05D007397 ORTHO05D009336 2.1e-45 186.4 162 64.2
AL3G23990 Arabidopsis lyrata HOM05D007397 ORTHO05D009336 2.7e-45 186.0 164 64.6
Rhsim09G0155900 Rhododendron simsii HOM05D007397 ORTHO05D009336 4.6e-45 185.3 190 54.2
VMungo1309G1572 Vigna mungo HOM05D007397 ORTHO05D009336 4.6e-45 185.3 180 61.1
Aa31sc153G60 Aethionema arabicum HOM05D007397 ORTHO05D009336 7.9e-45 184.5 157 65.6
SalBow2G2387 Salvia bowleyana HOM05D007397 ORTHO05D009336 1.4e-44 183.7 195 58.5
CsaV3_5G026110 Cucumis sativus L. HOM05D007397 ORTHO05D009336 1.8e-44 183.3 186 58.1
Medtr1g115740 Medicago truncatula HOM05D007397 ORTHO05D009336 3.9e-44 182.2 193 52.8
THA.LOC104827311 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 3.9e-44 182.2 128 72.7
Phvul.009G036400 Phaseolus vulgaris HOM05D007397 ORTHO05D009336 5.1e-44 181.8 195 56.4
CARHR086880 Cardamine hirsuta HOM05D007397 ORTHO05D009336 8.8e-44 181.0 176 58.5
Lj1P929T40 Lonicera japonica HOM05D007397 ORTHO05D009336 8.8e-44 181.0 144 61.1
Sed0011140 Sechium edule HOM05D007397 ORTHO05D009336 1.1e-43 180.6 193 58.5
Aqoxy5G01687 Aquilegia oxysepala HOM05D007397 ORTHO05D009336 2.0e-43 179.9 204 53.4
TAR320G0002 Trochodendron aralioides HOM05D007397 ORTHO05D009336 2.5e-43 179.5 195 54.9
MBI05_g32638_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 5.7e-43 178.3 151 60.3
AUR62042666 Chenopodium quinoa HOM05D007397 ORTHO05D009336 7.4e-43 177.9 177 55.4
Nn2g12828 Nelumbo nucifera HOM05D007397 ORTHO05D009336 1.3e-42 177.2 198 54.0
RcHm_v2.0_Chr1g0365021 Rosa chinensis HOM05D007397 ORTHO05D009336 1.3e-42 177.2 190 56.8
BcaB04g21083 Brassica carinata HOM05D007397 ORTHO05D009336 2.8e-42 176.0 183 57.4
BcaB04g21085 Brassica carinata HOM05D007397 ORTHO05D009336 2.8e-42 176.0 183 57.4
Migut.L01413 Erythranthe guttata HOM05D007397 ORTHO05D009336 2.8e-42 176.0 173 56.6
HanXRQChr14g0460741 Helianthus annuus HOM05D007397 ORTHO05D009336 2.8e-42 176.0 180 56.1
BcaC05g29269 Brassica carinata HOM05D007397 ORTHO05D009336 3.7e-42 175.6 172 58.1
EL10Ac2g03499 Beta vulgaris HOM05D007397 ORTHO05D009336 4.8e-42 175.3 177 54.8
C05p55480 Brassica napus HOM05D007397 ORTHO05D009336 4.8e-42 175.3 173 57.8
BolC5t34214H Brassica oleracea HOM05D007397 ORTHO05D009336 4.8e-42 175.3 173 57.8
BraA05t22502Z Brassica rapa HOM05D007397 ORTHO05D009336 4.8e-42 175.3 174 55.2
COL.COLO4_37769 Corchorus olitorius HOM05D007397 ORTHO05D009336 4.8e-42 175.3 199 58.8
Prupe.2G224700 Prunus persica HOM05D007397 ORTHO05D009336 4.8e-42 175.3 203 56.2
A05p37050 Brassica napus HOM05D007397 ORTHO05D009336 6.3e-42 174.9 172 55.8
Lalb_Chr06g0164111 Lupinus albus HOM05D007397 ORTHO05D009336 8.2e-42 174.5 187 53.5
Manes.10G039600 Manihot esculenta HOM05D007397 ORTHO05D009336 1.8e-41 173.3 199 59.8
Dinv25942 Davidia involucrata HOM05D007397 ORTHO05D009336 2.4e-41 172.9 178 59.0
TPR.G10388 Trifolium pratense HOM05D007397 ORTHO05D009336 4.1e-41 172.2 197 51.8
THA.LOC104809886 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 6.9e-41 171.4 181 55.2
Sc06g0001870 Simmondsia chinensis HOM05D007397 ORTHO05D009336 1.5e-40 170.2 163 55.2
PSO384G5114 Papaver somniferum HOM05D007397 ORTHO05D009336 7.7e-40 167.9 127 73.2
Psat6g239080 Pisum sativum HOM05D007397 ORTHO05D009336 2.9e-39 166.0 166 55.4
unitig_22.g6935 Utricularia gibba HOM05D007397 ORTHO05D009336 2.9e-39 166.0 197 51.8
DCAR_015250 Daucus carota HOM05D007397 ORTHO05D009336 5.0e-39 165.2 128 63.3
CDE02G3908 Ceratophyllum demersum HOM05D001333 ORTHO05D001208 1.4e-38 163.7 164 54.9
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 1.4e-38 163.7 155 61.9
PSO339G5749 Papaver somniferum HOM05D007397 ORTHO05D009336 1.4e-38 163.7 127 71.7
CAN.G1557.1 Capsicum annuum HOM05D007397 ORTHO05D009336 1.9e-38 163.3 116 69.8
Nitab4.5_0007221g0040 Nicotiana tabacum HOM05D007397 ORTHO05D009336 2.5e-38 162.9 189 54.0
ATR0681G332 Amborella trichopoda HOM05D007397 ORTHO05D009336 7.2e-38 161.4 192 47.4
Atru.chr12.591 Acer truncatum HOM05D007397 ORTHO05D009336 1.6e-37 160.2 190 51.6
FAN10G1155 Fragaria x ananassa HOM05D007397 ORTHO05D009336 4.7e-37 158.7 179 53.1
Ciclev10034008m.g Citrus clementina HOM05D007397 ORTHO05D009336 1.5e-35 153.7 95 80.0
HPP92_025097 Vanilla planifolia HOM05D007397 ORTHO05D009336 2.2e-34 149.8 164 46.3
AUR62025539 Chenopodium quinoa HOM05D007397 ORTHO05D009336 1.8e-33 146.7 198 48.0
Duzib106G0993 Durio zibethinus HOM05D007397 ORTHO05D009336 5.3e-33 145.2 206 50.0
MBI05_g30757_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 1.2e-32 144.1 187 42.8
SEGI_38306 Sequoiadendron giganteum HOM05D007397 ORTHO05D009336 7.7e-32 141.4 177 46.9
Peaxi162Scf00135g00025 Petunia axillaris HOM05D007397 ORTHO05D009336 9.4e-30 134.4 89 70.8
Nitab4.5_0006737g0020 Nicotiana tabacum HOM05D007397 ORTHO05D009336 2.1e-29 133.3 127 64.6
Mapoly0043s0078 Marchantia polymorpha HOM05D007397 ORTHO05D009336 1.4e-28 130.6 134 47.8
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 4.4e-27 125.6 148 50.0
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 4.8e-26 122.1 134 46.3
Cfa009156 Carpinus fangiana HOM05D007397 ORTHO05D009336 2.9e-23 112.8 143 57.3
Os06g0484500 Oryza sativa ssp. japonica HOM05D007397 ORTHO05D009336 1.9e-22 110.2 204 40.2
Duzib114G0919 Durio zibethinus HOM05D007397 ORTHO05D009336 1.0e-20 104.4 144 46.5
Zm00001eb397310 Zea mays HOM05D007397 ORTHO05D009336 1.0e-20 104.4 161 46.6
AagrBONN_evm.TU.Sc2ySwM_368.51 Anthoceros agrestis HOM05D007397 ORTHO05D009336 4.5e-16 89.0 73 53.4
C03p57580 Brassica napus HOM05D007397 ORTHO05D009336 3.2e-14 82.8 114 45.6
BcaC03g17725 Brassica carinata HOM05D007397 ORTHO05D009336 1.4e-12 77.4 108 44.4
Lsat_1_v5_gn_7_115640 Lactuca sativa HOM05D018034 ORTHO05D006583 7.3e-06 55.1 87 50.6


User provided reference genes

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