Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra08G0029500 Salix brachista HOM05D005690 ORTHO05D007075 2.3e-145 518.8 254 100.0
Potri.008G042800 Populus trichocarpa HOM05D005690 ORTHO05D007075 3.2e-123 445.3 254 87.4
Potri.010G219400 Populus trichocarpa HOM05D005690 ORTHO05D007075 6.5e-116 421.0 254 83.1
Potri.010G219000 Populus trichocarpa HOM05D005690 ORTHO05D007075 4.2e-107 391.7 219 87.2
Sabra10G0169300 Salix brachista HOM05D005690 ORTHO05D007075 7.2e-107 391.0 303 68.6
Manes.07G103000 Manihot esculenta HOM05D005690 ORTHO05D007075 1.4e-102 376.7 250 77.2
GSVIVG01016316001 Vitis vinifera HOM05D005690 ORTHO05D007075 7.7e-101 370.9 249 73.5
Dinv11797 Davidia involucrata HOM05D005690 ORTHO05D007075 6.5e-100 367.9 250 75.6
Thecc.10G069500 Theobroma cacao HOM05D005690 ORTHO05D007075 1.4e-99 366.7 250 75.2
Gohir.D06G176800 Gossypium hirsutum HOM05D005690 ORTHO05D007075 4.2e-99 365.2 249 75.9
Gorai.010G204700 Gossypium raimondii HOM05D005690 ORTHO05D007075 4.2e-99 365.2 249 75.9
CiPaw.02G175700 Carya illinoinensis HOM05D005690 ORTHO05D007075 7.2e-99 364.4 249 75.1
Duzib114G0556 Durio zibethinus HOM05D005690 ORTHO05D007075 1.2e-98 363.6 250 73.6
COL.COLO4_32034 Corchorus olitorius HOM05D005690 ORTHO05D007075 6.1e-98 361.3 251 76.5
Gohir.A06G178200 Gossypium hirsutum HOM05D005690 ORTHO05D007075 2.3e-97 359.4 249 75.1
Prupe.2G217200 Prunus persica HOM05D005690 ORTHO05D007075 6.7e-97 357.8 252 72.6
MD07G1177900 Malus domestica HOM05D005690 ORTHO05D007075 7.4e-96 354.4 252 71.4
MD01G1111700 Malus domestica HOM05D005690 ORTHO05D007075 2.2e-95 352.8 252 71.4
TAR633G2147 Trochodendron aralioides HOM05D005690 ORTHO05D007075 2.8e-95 352.4 256 73.0
Cfa001602 Carpinus fangiana HOM05D005690 ORTHO05D007075 9.1e-94 347.4 250 73.2
TAR636G2049 Trochodendron aralioides HOM05D005690 ORTHO05D007075 1.2e-93 347.1 254 70.1
FAN10G0816 Fragaria x ananassa HOM05D005690 ORTHO05D007075 2.0e-93 346.3 250 70.4
Atru.chr12.697 Acer truncatum HOM05D005690 ORTHO05D007075 2.6e-93 345.9 251 72.5
Cpa.g.sc53.43 Carica papaya HOM05D005690 ORTHO05D007075 2.6e-93 345.9 250 74.4
RcHm_v2.0_Chr1g0363981 Rosa chinensis HOM05D005690 ORTHO05D007075 3.4e-93 345.5 252 71.8
Ciclev10032614m.g Citrus clementina HOM05D005690 ORTHO05D007075 4.5e-93 345.1 250 73.2
FvH4_7g20020 Fragaria vesca HOM05D005690 ORTHO05D007075 4.5e-93 345.1 250 70.4
FAN03G1698 Fragaria x ananassa HOM05D005690 ORTHO05D007075 4.5e-93 345.1 250 70.4
FAN06G0212 Fragaria x ananassa HOM05D005690 ORTHO05D007075 4.5e-93 345.1 250 70.4
Atru.chr12.670 Acer truncatum HOM05D005690 ORTHO05D007075 6.5e-92 341.3 250 72.0
CAN.G694.84 Capsicum annuum HOM05D005690 ORTHO05D007075 1.4e-91 340.1 248 70.6
Nitab4.5_0000476g0050 Nicotiana tabacum HOM05D005690 ORTHO05D007075 1.4e-91 340.1 249 71.5
Haze_16926 Corylus avellana HOM05D005690 ORTHO05D007075 1.9e-91 339.7 250 72.8
Peaxi162Scf00108g00166 Petunia axillaris HOM05D005690 ORTHO05D007075 3.2e-91 339.0 254 69.3
FAN01G0973 Fragaria x ananassa HOM05D005690 ORTHO05D007075 4.2e-91 338.6 250 69.2
Solyc05g056090.3 Solanum lycopersicum HOM05D005690 ORTHO05D007075 4.2e-91 338.6 248 71.8
Sopen05g034500 Solanum pennellii HOM05D005690 ORTHO05D007075 5.5e-91 338.2 248 71.4
Glyma.17G183500 Glycine max HOM05D005690 ORTHO05D007075 9.4e-91 337.4 250 69.6
PGSC0003DMG400023460 Solanum tuberosum HOM05D005690 ORTHO05D007075 1.2e-90 337.0 248 70.6
Nitab4.5_0009003g0010 Nicotiana tabacum HOM05D005690 ORTHO05D007075 2.1e-90 336.3 217 77.4
QL08p056659 Quercus lobata HOM05D005690 ORTHO05D007075 2.7e-90 335.9 249 69.1
Nn2g13015 Nelumbo nucifera HOM05D005690 ORTHO05D007075 3.6e-90 335.5 216 78.2
Nitab4.5_0012288g0020 Nicotiana tabacum HOM05D005690 ORTHO05D007075 6.1e-90 334.7 254 68.1
Cc02_g11390 Coffea canephora HOM05D005690 ORTHO05D007075 7.9e-90 334.3 249 71.1
MSTRG.373 Avicennia marina HOM05D005690 ORTHO05D007075 3.0e-89 332.4 250 68.8
Lj2g0014971 Lotus japonicus HOM05D005690 ORTHO05D007075 3.0e-89 332.4 250 70.8
TWI38G1302 Tripterygium wilfordii HOM05D005690 ORTHO05D007075 2.6e-88 329.3 251 68.5
VMungo0464G0948 Vigna mungo HOM05D005690 ORTHO05D007075 2.6e-88 329.3 249 69.9
Peaxi162Scf01175g00023 Petunia axillaris HOM05D005690 ORTHO05D007075 4.4e-88 328.6 240 71.2
Rhsim09G0153300 Rhododendron simsii HOM05D005690 ORTHO05D007075 1.7e-87 326.6 220 72.3
THA.LOC104802837 Tarenaya hassleriana HOM05D005690 ORTHO05D007075 1.7e-87 326.6 249 69.5
MELO3C002879.2 Cucumis melo HOM05D005690 ORTHO05D007075 2.2e-87 326.2 252 70.6
Eucgr.J01111 Eucalyptus grandis HOM05D005690 ORTHO05D007075 3.7e-87 325.5 251 68.1
Nitab4.5_0000233g0230 Nicotiana tabacum HOM05D005690 ORTHO05D007075 3.7e-87 325.5 211 74.4
CsaV3_5G025890 Cucumis sativus L. HOM05D005690 ORTHO05D007075 1.1e-86 323.9 252 69.8
Hma1.2p1_2080F.1_g313490 Hydrangea macrophylla HOM05D005690 ORTHO05D007075 1.8e-86 323.2 251 67.7
Phvul.004G075000 Phaseolus vulgaris HOM05D005690 ORTHO05D007075 1.8e-86 323.2 249 69.1
Aa31LG9G7550 Aethionema arabicum HOM05D005690 ORTHO05D007075 3.1e-86 322.4 253 68.0
Lalb_Chr19g0129571 Lupinus albus HOM05D005690 ORTHO05D007075 5.3e-86 321.6 194 81.4
PGR044G2452 Punica granatum HOM05D005690 ORTHO05D007075 5.3e-86 321.6 253 66.8
arahy.Tifrunner.gnm1.ann1.08HL34 Arachis hypogaea HOM05D005690 ORTHO05D007075 1.2e-85 320.5 194 81.4
Sed0019941 Sechium edule HOM05D005690 ORTHO05D007075 1.2e-85 320.5 246 68.3
arahy.Tifrunner.gnm1.ann1.8E9GH8 Arachis hypogaea HOM05D005690 ORTHO05D007075 1.6e-85 320.1 217 75.1
TPR.G36634 Trifolium pratense HOM05D005690 ORTHO05D007075 1.6e-85 320.1 253 66.4
CANSAT56G3535 Cannabis sativa HOM05D005690 ORTHO05D007075 2.6e-85 319.3 250 68.0
Hma1.2p1_0453F.1_g156020 Hydrangea macrophylla HOM05D005690 ORTHO05D007075 2.6e-85 319.3 218 72.0
Rhsim03G0123000 Rhododendron simsii HOM05D005690 ORTHO05D007075 1.0e-84 317.4 215 74.0
Hund19342 Selenicereus undatus HOM05D005690 ORTHO05D007075 1.7e-84 316.6 251 66.1
PSO384G2564 Papaver somniferum HOM05D005690 ORTHO05D007075 3.2e-83 312.4 252 66.3
Ca_04676_v3 Cicer arietinum L. HOM05D005690 ORTHO05D007075 4.2e-83 312.0 250 66.0
PSO339G2382 Papaver somniferum HOM05D005690 ORTHO05D007075 4.2e-83 312.0 252 65.5
MBI05_g11579_MAGBIO Magnolia biondii HOM05D005690 ORTHO05D007075 7.2e-83 311.2 194 79.9
Sed0011214 Sechium edule HOM05D005690 ORTHO05D007075 9.4e-83 310.8 250 68.0
Medtr6g033405 Medicago truncatula HOM05D005690 ORTHO05D007075 1.2e-82 310.5 203 75.4
vmacro04884 Vaccinium macrocarpon HOM05D005690 ORTHO05D007075 1.2e-82 310.5 217 70.5
ECA232G2854 Erigeron canadensis HOM05D005690 ORTHO05D007075 1.6e-82 310.1 249 66.7
Lsat_1_v5_gn_9_67140 Lactuca sativa HOM05D005690 ORTHO05D007075 4.7e-82 308.5 251 64.9
SalBow4G1295 Salvia bowleyana HOM05D005690 ORTHO05D007075 1.0e-81 307.4 241 66.0
Migut.F01989 Erythranthe guttata HOM05D005690 ORTHO05D007075 2.3e-81 306.2 252 65.9
SalBow3G1299 Salvia bowleyana HOM05D005690 ORTHO05D007075 8.8e-81 304.3 250 61.6
Aqoxy6G02013 Aquilegia oxysepala HOM05D005690 ORTHO05D007075 2.0e-80 303.1 252 64.3
HanXRQChr09g0246501 Helianthus annuus HOM05D005690 ORTHO05D007075 3.3e-80 302.4 249 64.7
AT2G35790 Arabidopsis thaliana HOM05D005690 ORTHO05D007075 4.4e-80 302.0 254 65.4
AUR62027946 Chenopodium quinoa HOM05D005690 ORTHO05D007075 4.4e-80 302.0 199 73.9
Carub.0004s1755 Capsella rubella HOM05D005690 ORTHO05D007075 5.7e-80 301.6 254 64.2
unitig_0.g529 Utricularia gibba HOM05D005690 ORTHO05D007075 9.7e-80 300.8 190 75.3
CARHR130040 Cardamine hirsuta HOM05D005690 ORTHO05D007075 1.3e-79 300.4 254 64.6
HPP92_003607 Vanilla planifolia HOM05D005690 ORTHO05D007075 2.2e-79 299.7 193 77.7
AL4G31900 Arabidopsis lyrata HOM05D005690 ORTHO05D007075 8.2e-79 297.7 255 64.7
ATR1159G074 Amborella trichopoda HOM05D005690 ORTHO05D007075 1.1e-78 297.4 226 67.7
AUR62020766 Chenopodium quinoa HOM05D005690 ORTHO05D007075 5.3e-78 295.0 199 72.4
EL10Ac2g03578 Beta vulgaris HOM05D005690 ORTHO05D007075 1.2e-77 293.9 200 72.5
Thhalv10017166m.g Eutrema salsugineum HOM05D005690 ORTHO05D007075 1.2e-77 293.9 256 63.3
SGA_v2.0_scaffold28G12052 Striga asiatica HOM05D005690 ORTHO05D007075 1.2e-77 293.9 189 77.8
BolC4t27955H Brassica oleracea HOM05D005690 ORTHO05D007075 1.6e-77 293.5 253 63.2
CDE04G0636 Ceratophyllum demersum HOM05D005690 ORTHO05D007075 2.7e-77 292.7 200 73.0
HanXRQChr17g0563371 Helianthus annuus HOM05D005690 ORTHO05D007075 2.7e-77 292.7 189 75.7
Sp4g18050 Schrenkiella parvula HOM05D005690 ORTHO05D007075 1.7e-76 290.0 253 63.2
ClCG09G020510 Citrullus lanatus HOM05D005690 ORTHO05D007075 2.2e-76 289.7 227 68.7
BraA04t18224Z Brassica rapa HOM05D005690 ORTHO05D007075 2.9e-76 289.3 258 60.9
A04p27260 Brassica napus HOM05D005690 ORTHO05D007075 3.8e-76 288.9 259 60.6
BcaC01g05707 Brassica carinata HOM05D005690 ORTHO05D007075 8.5e-76 287.7 252 63.1
C03p22980 Brassica napus HOM05D005690 ORTHO05D007075 8.5e-76 287.7 252 63.1
C04p64770 Brassica napus HOM05D005690 ORTHO05D007075 1.5e-75 287.0 255 60.8
BcaB06g28872 Brassica carinata HOM05D005690 ORTHO05D007075 9.4e-75 284.3 256 61.3
Ah.16g108410 Amaranthus hybridus HOM05D005690 ORTHO05D007075 1.2e-74 283.9 200 71.0
A03p19730 Brassica napus HOM05D005690 ORTHO05D007075 2.7e-74 282.7 254 61.0
Zm00001eb064810 Zea mays HOM05D005690 ORTHO05D007075 1.4e-73 280.4 193 74.6
Eucgr.J01110 Eucalyptus grandis HOM05D005690 ORTHO05D007075 4.4e-72 275.4 245 58.0
BcaC02g07668 Brassica carinata HOM05D005690 ORTHO05D007075 1.8e-70 270.0 232 64.7
BcaB01g03881 Brassica carinata HOM05D005690 ORTHO05D007075 1.2e-69 267.3 260 58.1
CDE07G1130 Ceratophyllum demersum HOM05D005690 ORTHO05D007075 2.0e-69 266.5 202 67.3
Os03g0853800 Oryza sativa ssp. japonica HOM05D005690 ORTHO05D007075 5.0e-68 261.9 167 78.4
CSS0000246 Camellia sinensis var. sinensis HOM05D005690 ORTHO05D007075 8.0e-66 254.6 210 66.7
SEGI_15078 Sequoiadendron giganteum HOM05D005690 ORTHO05D007075 5.4e-62 241.9 246 52.8
CiPaw.01G275500 Carya illinoinensis HOM05D005690 ORTHO05D007075 1.4e-57 227.3 202 63.4
Sc06g0001780 Simmondsia chinensis HOM05D005690 ORTHO05D007075 4.1e-54 215.7 120 85.8
Peaxi162Scf00108g00173 Petunia axillaris HOM05D005690 ORTHO05D007075 2.0e-53 213.4 121 82.6
Nitab4.5_0003072g0050 Nicotiana tabacum HOM05D005690 ORTHO05D007075 4.3e-51 205.7 187 58.3
Lj8C97T4 Lonicera japonica HOM05D005690 ORTHO05D007075 2.8e-50 203.0 121 81.0
BcaB01g03882 Brassica carinata HOM05D005690 ORTHO05D007075 2.6e-48 196.4 111 81.1
Psat1g099440 Pisum sativum HOM05D005690 ORTHO05D007075 2.9e-47 193.0 165 61.2
AagrBONN_evm.TU.Sc2ySwM_362.1612 Anthoceros agrestis HOM05D005690 ORTHO05D007075 4.1e-46 189.1 161 56.5
Mapoly0033s0041 Marchantia polymorpha HOM05D005690 ORTHO05D007075 1.3e-44 184.1 200 46.0
Pp3c10_15170 Physcomitrium patens HOM05D005690 ORTHO05D007075 2.0e-40 170.2 174 48.9
Psat2g052960 Pisum sativum HOM05D004553 ORTHO05D005426 3.7e-39 166.0 173 49.1
Mapoly0033s0042 Marchantia polymorpha HOM05D005690 ORTHO05D007075 7.8e-37 158.3 152 49.3
Lalb_Chr01g0010161 Lupinus albus HOM05D005690 ORTHO05D007075 3.5e-29 132.9 68 88.2
SMO239G0063 Selaginella moellendorffii HOM05D005690 ORTHO05D007075 1.1e-27 127.9 177 36.7
Lalb_Chr01g0010151 Lupinus albus HOM05D005690 ORTHO05D007075 1.5e-19 100.9 128 51.6
Nn2g10688 Nelumbo nucifera HOM05D005690 ORTHO05D007075 1.4e-17 94.4 113 48.7
Cre12.g540051 Chlamydomonas reinhardtii HOM05D005690 ORTHO05D007075 4.5e-16 89.4 143 35.7
CDE07G0610 Ceratophyllum demersum HOM05D005690 ORTHO05D007075 3.5e-13 79.7 123 42.3
MCO03G451 Micromonas commoda HOM05D005690 ORTHO05D007075 5.1e-12 75.9 132 34.1
HanXRQChr10g0292531 Helianthus annuus HOM05D005690 ORTHO05D007075 7.1e-06 55.5 59 52.5


User provided reference genes

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