Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra08G0007400 Salix brachista HOM05D006789 ORTHO05D008460 3.4e-105 385.2 218 100.0
Potri.008G012100 Populus trichocarpa HOM05D006789 ORTHO05D008460 2.2e-96 355.9 219 91.3
Dinv24597 Davidia involucrata HOM05D006789 ORTHO05D008460 1.7e-80 303.1 211 75.4
Ciclev10029282m.g Citrus clementina HOM05D006789 ORTHO05D008460 3.8e-80 302.0 211 74.9
Gorai.N006500 Gossypium raimondii HOM05D006789 ORTHO05D008460 4.9e-80 301.6 211 75.4
Gohir.A06G170900 Gossypium hirsutum HOM05D006789 ORTHO05D008460 8.4e-80 300.8 211 75.4
Gohir.D06G178700 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.9e-79 299.7 211 74.9
PGR044G1098 Punica granatum HOM05D006789 ORTHO05D008460 1.2e-78 297.0 211 75.4
Duzib106G0468 Durio zibethinus HOM05D006789 ORTHO05D008460 7.8e-78 294.3 209 73.7
Thecc.10G129500 Theobroma cacao HOM05D006789 ORTHO05D008460 1.7e-77 293.1 219 74.0
Rhsim07G0072100 Rhododendron simsii HOM05D006789 ORTHO05D008460 2.3e-77 292.7 225 69.8
Atru.chr3.2036 Acer truncatum HOM05D006789 ORTHO05D008460 5.1e-77 291.6 209 72.2
vmacro13786 Vaccinium macrocarpon HOM05D006789 ORTHO05D008460 8.6e-77 290.8 233 67.8
TWI38G1707 Tripterygium wilfordii HOM05D006789 ORTHO05D008460 1.1e-76 290.4 212 70.8
Eucgr.J00312 Eucalyptus grandis HOM05D006789 ORTHO05D008460 1.9e-76 289.7 200 74.0
Manes.10G064901 Manihot esculenta HOM05D006789 ORTHO05D008460 1.2e-75 287.0 212 78.8
GSVIVG01027313001 Vitis vinifera HOM05D006789 ORTHO05D008460 1.2e-75 287.0 174 81.6
Hma1.2p1_0892F.1_g233210 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 1.6e-75 286.6 211 72.5
Haze_03403 Corylus avellana HOM05D006789 ORTHO05D008460 6.2e-75 284.6 239 65.7
CiPaw.14G037500 Carya illinoinensis HOM05D006789 ORTHO05D008460 1.1e-74 283.9 211 71.1
Prupe.2G061000 Prunus persica HOM05D006789 ORTHO05D008460 1.4e-74 283.5 216 71.8
TAR633G0905 Trochodendron aralioides HOM05D006789 ORTHO05D008460 3.4e-73 278.9 174 79.9
Lalb_Chr15g0079361 Lupinus albus HOM05D006789 ORTHO05D008460 5.8e-73 278.1 209 68.9
arahy.Tifrunner.gnm1.ann1.KMQ9TB Arachis hypogaea HOM05D006789 ORTHO05D008460 9.9e-73 277.3 210 69.0
TPR.G25521 Trifolium pratense HOM05D006789 ORTHO05D008460 9.9e-73 277.3 210 70.0
ClCG05G022140 Citrullus lanatus HOM05D006789 ORTHO05D008460 1.7e-72 276.6 208 72.1
arahy.Tifrunner.gnm1.ann1.G6AZCI Arachis hypogaea HOM05D006789 ORTHO05D008460 2.9e-72 275.8 210 68.6
Glyma.04G129000 Glycine max HOM05D006789 ORTHO05D008460 2.9e-72 275.8 209 69.4
MBI19_g19122_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 3.8e-72 275.4 174 78.2
DCAR_006626 Daucus carota HOM05D006789 ORTHO05D008460 6.4e-72 274.6 212 66.5
Medtr3g006790 Medicago truncatula HOM05D006789 ORTHO05D008460 1.9e-71 273.1 209 68.9
Glyma.06G315000 Glycine max HOM05D006789 ORTHO05D008460 3.2e-71 272.3 209 67.9
Lj3g0008710 Lotus japonicus HOM05D006789 ORTHO05D008460 4.2e-71 271.9 209 67.5
Thhalv10014633m.g Eutrema salsugineum HOM05D006789 ORTHO05D008460 5.4e-71 271.6 216 67.6
CsaV3_5G034990 Cucumis sativus L. HOM05D006789 ORTHO05D008460 9.3e-71 270.8 208 68.8
MELO3C012309.2 Cucumis melo HOM05D006789 ORTHO05D008460 1.2e-70 270.4 208 68.3
BcaC06g32200 Brassica carinata HOM05D006789 ORTHO05D008460 1.6e-70 270.0 213 67.1
MD02G1265000 Malus domestica HOM05D006789 ORTHO05D008460 2.1e-70 269.6 219 67.1
Actinidia19614 Actinidia chinensis HOM05D000583 ORTHO05D000442 2.7e-70 269.2 169 82.2
A10p31220 Brassica napus HOM05D006789 ORTHO05D008460 2.7e-70 269.2 214 66.8
Sp6g37890 Schrenkiella parvula HOM05D006789 ORTHO05D008460 2.7e-70 269.2 214 66.8
BraA10t45166Z Brassica rapa HOM05D006789 ORTHO05D008460 3.5e-70 268.9 214 66.8
C09p71840 Brassica napus HOM05D006789 ORTHO05D008460 6.0e-70 268.1 214 66.8
VMungo0647G0732 Vigna mungo HOM05D006789 ORTHO05D008460 6.0e-70 268.1 209 66.5
BolC9t59933H Brassica oleracea HOM05D006789 ORTHO05D008460 7.8e-70 267.7 214 66.8
Carub.0006s0385 Capsella rubella HOM05D006789 ORTHO05D008460 7.8e-70 267.7 213 68.1
THA.LOC104826955 Tarenaya hassleriana HOM05D006789 ORTHO05D008460 7.8e-70 267.7 213 67.6
FvH4_7g05010 Fragaria vesca HOM05D006789 ORTHO05D008460 1.0e-69 267.3 214 67.3
CANSAT56G4131 Cannabis sativa HOM05D006789 ORTHO05D008460 3.9e-69 265.4 214 65.4
FAN06G2149 Fragaria x ananassa HOM05D006789 ORTHO05D008460 5.1e-69 265.0 220 65.5
Gorai.010G208300 Gossypium raimondii HOM05D006789 ORTHO05D008460 5.1e-69 265.0 159 84.3
Oeu013184.1 Olea europaea HOM05D006789 ORTHO05D008460 5.1e-69 265.0 216 64.4
CSS0000309 Camellia sinensis var. sinensis HOM05D006789 ORTHO05D008460 6.6e-69 264.6 288 53.8
Gorai.N006000 Gossypium raimondii HOM05D006789 ORTHO05D008460 8.7e-69 264.2 156 85.3
RcHm_v2.0_Chr1g0331321 Rosa chinensis HOM05D006789 ORTHO05D008460 1.5e-68 263.5 219 65.3
Hund00694 Selenicereus undatus HOM05D006789 ORTHO05D008460 1.9e-68 263.1 224 62.9
AT5G04910 Arabidopsis thaliana HOM05D006789 ORTHO05D008460 2.5e-68 262.7 220 64.5
Aqoxy1G00021 Aquilegia oxysepala HOM05D006789 ORTHO05D008460 3.3e-68 262.3 174 73.6
AL6G14600 Arabidopsis lyrata HOM05D006789 ORTHO05D008460 3.3e-68 262.3 220 64.5
Lsat_1_v5_gn_2_28141 Lactuca sativa HOM05D006789 ORTHO05D008460 4.3e-68 261.9 211 64.5
Phvul.008G161900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 4.3e-68 261.9 206 65.5
COL.COLO4_28906 Corchorus olitorius HOM05D006789 ORTHO05D008460 5.6e-68 261.5 159 82.4
MSTRG.5084 Avicennia marina HOM05D006789 ORTHO05D008460 7.3e-68 261.2 217 64.1
SalBow4G0168 Salvia bowleyana HOM05D006789 ORTHO05D008460 9.6e-68 260.8 222 61.3
SGA_v2.0_scaffold196G40989 Striga asiatica HOM05D006789 ORTHO05D008460 9.6e-68 260.8 174 73.0
Peaxi162Scf00217g00626 Petunia axillaris HOM05D006789 ORTHO05D008460 1.3e-67 260.4 210 65.2
EL10Ac4g08777 Beta vulgaris HOM05D006789 ORTHO05D008460 4.8e-67 258.5 211 63.5
SGA_v2.0_scaffold196G40996 Striga asiatica HOM05D006789 ORTHO05D008460 1.4e-66 256.9 174 72.4
Sed0016797 Sechium edule HOM05D006789 ORTHO05D008460 1.8e-66 256.5 208 65.9
HanXRQChr06g0181521 Helianthus annuus HOM05D006789 ORTHO05D008460 3.1e-66 255.8 208 65.9
ECA238G4254 Erigeron canadensis HOM05D006789 ORTHO05D008460 3.4e-65 252.3 211 64.0
Hma1.2p1_0892F.1_g233220 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 7.6e-65 251.1 151 82.8
Gohir.A06G170906 Gossypium hirsutum HOM05D006789 ORTHO05D008460 2.9e-64 249.2 157 80.3
Nn2g14746 Nelumbo nucifera HOM05D006789 ORTHO05D008460 3.8e-64 248.8 170 72.4
Solyc10g039380.2 Solanum lycopersicum HOM05D006789 ORTHO05D008460 6.4e-64 248.1 171 72.5
Sopen10g012840 Solanum pennellii HOM05D006789 ORTHO05D008460 7.1e-63 244.6 171 71.9
Gohir.D06G178832 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.3e-61 240.4 149 81.2
Sc22g0002280 Simmondsia chinensis HOM05D006789 ORTHO05D001455 1.8e-61 240.0 202 64.9
Aa31LG11G5790 Aethionema arabicum HOM05D006789 ORTHO05D008460 8.7e-61 237.7 221 59.3
PSO339G2606 Papaver somniferum HOM05D006789 ORTHO05D008460 8.7e-61 237.7 173 67.1
FAN03G1759 Fragaria x ananassa HOM05D006789 ORTHO05D008460 1.1e-60 237.3 223 63.2
Nitab4.5_0004033g0070 Nicotiana tabacum HOM05D006789 ORTHO05D008460 1.1e-60 237.3 154 77.3
Lj7C491T7 Lonicera japonica HOM05D006789 ORTHO05D008460 7.4e-60 234.6 146 78.8
Os01g0265700 Oryza sativa ssp. japonica HOM05D006789 ORTHO05D008460 1.3e-59 233.8 172 66.9
Zm00001eb128210 Zea mays HOM05D006789 ORTHO05D008460 1.6e-59 233.4 172 68.0
Cc02_g32010 Coffea canephora HOM05D006789 ORTHO05D008460 2.1e-59 233.0 158 72.2
PSO384G0303 Papaver somniferum HOM05D006789 ORTHO05D008460 6.2e-59 231.5 173 65.3
Nitab4.5_0002156g0010 Nicotiana tabacum HOM05D006789 ORTHO05D008460 3.1e-58 229.2 154 74.0
Sed0010043 Sechium edule HOM05D006789 ORTHO05D008460 3.4e-57 225.7 208 61.1
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 2.2e-56 223.0 150 73.3
CDE08G0307 Ceratophyllum demersum HOM05D006789 ORTHO05D008460 2.9e-56 222.6 176 65.3
ATR0068G087 Amborella trichopoda HOM05D006789 ORTHO05D008460 4.9e-56 221.9 151 72.2
Carub.0010s0003 Capsella rubella HOM05D006789 ORTHO05D008460 8.4e-56 221.1 166 69.3
Migut.N01877 Erythranthe guttata HOM05D006789 ORTHO05D008460 1.4e-55 220.3 214 56.5
FAN01G0280 Fragaria x ananassa HOM05D006789 ORTHO05D008460 4.6e-54 215.3 214 59.8
SEGI_32817 Sequoiadendron giganteum HOM05D006789 ORTHO05D008460 4.8e-51 205.3 157 63.7
MBI05_g14944_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 7.6e-49 198.0 138 71.0
Psat5g230200 Pisum sativum HOM05D006789 ORTHO05D008460 4.2e-47 192.2 122 78.7
unitig_26.g9495 Utricularia gibba HOM05D006789 ORTHO05D008460 2.7e-46 189.5 173 55.5
AUR62014306 Chenopodium quinoa HOM05D006789 ORTHO05D008460 1.4e-42 177.2 174 56.3
Actinidia29655 Actinidia chinensis HOM05D006789 ORTHO05D008460 7.2e-39 164.9 201 51.7
Pp3c10_8520 Physcomitrium patens HOM05D006789 ORTHO05D008460 9.3e-39 164.5 168 51.2
Gorai.010G208600 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.6e-38 163.7 146 65.1
CARHR208350 Cardamine hirsuta HOM05D006789 ORTHO05D008460 4.8e-35 152.1 90 82.2
Cfa010449 Carpinus fangiana HOM05D006789 ORTHO05D008460 9.1e-34 147.9 125 65.6
TAR629G1007 Trochodendron aralioides HOM05D001508 ORTHO05D008460 9.4e-31 137.9 79 83.5
TAR633G1630 Trochodendron aralioides HOM05D006789 ORTHO05D008460 9.4e-31 137.9 81 81.5
SMO364G0543 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 6.1e-30 135.2 176 44.3
Mapoly0023s0087 Marchantia polymorpha HOM05D006789 ORTHO05D008460 7.9e-30 134.8 171 44.4
Ca_14025_v3 Cicer arietinum L. HOM05D006789 ORTHO05D008460 4.4e-28 129.0 119 58.8
SMO353G0288 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 1.7e-24 117.1 167 42.5
TAR636G3403 Trochodendron aralioides HOM05D006789 ORTHO05D008460 2.5e-23 113.2 72 77.8
Cfa005731 Carpinus fangiana HOM05D012552 ORTHO05D018926 9.4e-23 111.3 80 70.0
BcaB03g15210 Brassica carinata HOM05D006789 ORTHO05D008460 3.6e-22 109.4 97 59.8
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 5.2e-21 105.5 72 75.0
CBR_g54451 Chara braunii HOM05D003248 ORTHO05D000301 2.2e-19 100.1 238 31.1
AUR62034099 Chenopodium quinoa HOM05D006789 ORTHO05D008460 4.2e-15 85.9 61 72.1
Phvul.005G010900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 4.2e-15 85.9 95 53.7
Cfa010304 Carpinus fangiana HOM05D012552 ORTHO05D018926 1.8e-13 80.5 83 60.2
SHI05402 Sapria himalayana HOM05D005149 ORTHO05D006251 3.7e-11 72.8 66 56.1
SHI21242 Sapria himalayana HOM05D006789 ORTHO05D008460 4.1e-10 69.3 59 61.0
Cre16.g683483 Chlamydomonas reinhardtii HOM05D006789 ORTHO05D008460 2.7e-09 66.6 93 40.9


User provided reference genes

Program Settings