Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra08G0002100 Salix brachista HOM05D007715 ORTHO05D009760 1.6e-120 436.0 207 100.0
Potri.008G004500 Populus trichocarpa HOM05D007715 ORTHO05D009760 3.7e-109 398.3 236 82.6
Manes.14G008300 Manihot esculenta HOM05D007715 ORTHO05D009760 2.8e-93 345.5 236 70.3
FvH4_6g36931 Fragaria vesca HOM05D007715 ORTHO05D009760 7.6e-91 337.4 237 67.9
MD09G1165400 Malus domestica HOM05D007715 ORTHO05D009760 7.6e-91 337.4 237 68.4
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 8.5e-90 334.0 237 67.5
Ciclev10032622m.g Citrus clementina HOM05D007715 ORTHO05D009760 1.4e-89 333.2 237 67.5
Thecc.06G056700 Theobroma cacao HOM05D007715 ORTHO05D009760 1.4e-89 333.2 237 67.9
RcHm_v2.0_Chr2g0149371 Rosa chinensis HOM05D007715 ORTHO05D009760 3.2e-89 332.0 237 67.5
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.6e-88 329.7 235 68.1
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 4.6e-88 328.2 237 66.7
CSS0043564 Camellia sinensis var. sinensis HOM05D007715 ORTHO05D009760 6.1e-88 327.8 235 66.8
Eucgr.F04031 Eucalyptus grandis HOM05D007715 ORTHO05D009760 6.1e-88 327.8 220 70.0
Duzib235G0054 Durio zibethinus HOM05D007715 ORTHO05D009760 1.3e-87 326.6 238 66.0
Haze_16178 Corylus avellana HOM05D007715 ORTHO05D009760 5.1e-87 324.7 219 69.4
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 6.7e-87 324.3 237 65.8
TAR383G0241 Trochodendron aralioides HOM05D007715 ORTHO05D009760 6.7e-87 324.3 236 66.9
Gohir.D06G121500 Gossypium hirsutum HOM05D007715 ORTHO05D009760 8.8e-87 323.9 234 66.2
Gorai.010G141800 Gossypium raimondii HOM05D007715 ORTHO05D009760 8.8e-87 323.9 233 65.7
Cfa003439 Carpinus fangiana HOM05D007715 ORTHO05D009760 1.1e-86 323.6 219 68.9
MD17G1162300 Malus domestica HOM05D007715 ORTHO05D009760 1.5e-86 323.2 221 68.8
CANSAT01G2071 Cannabis sativa HOM05D007715 ORTHO05D009760 2.5e-86 322.4 223 68.2
Hma1.2p1_1111F.1_g258440 Hydrangea macrophylla HOM05D007715 ORTHO05D009760 1.7e-85 319.7 237 65.4
PGR102G0299 Punica granatum HOM05D007715 ORTHO05D009760 3.1e-84 315.5 223 67.3
Nn2g12750 Nelumbo nucifera HOM05D007715 ORTHO05D009760 4.1e-84 315.1 236 64.4
CiPaw.02G129300 Carya illinoinensis HOM05D007715 ORTHO05D009760 6.9e-84 314.3 240 63.8
MBI16_g18218_MAGBIO Magnolia biondii HOM05D007715 ORTHO05D009760 2.0e-83 312.8 221 67.0
GSVIVG01029551001 Vitis vinifera HOM05D007715 ORTHO05D009760 2.6e-83 312.4 237 65.8
Cpa.g.sc176.1 Carica papaya HOM05D007715 ORTHO05D009760 1.0e-82 310.5 257 59.1
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 2.2e-82 309.3 230 63.0
vmacro18742 Vaccinium macrocarpon HOM05D007715 ORTHO05D009760 2.9e-82 308.9 223 67.7
Atru.BG.168.p Acer truncatum HOM05D007715 ORTHO05D009760 3.8e-82 308.5 211 68.7
Actinidia38809 Actinidia chinensis HOM05D007715 ORTHO05D009760 3.2e-81 305.4 235 64.3
Lsat_1_v5_gn_4_89140 Lactuca sativa HOM05D007715 ORTHO05D009760 1.8e-79 299.7 223 64.1
CDE05G1192 Ceratophyllum demersum HOM05D007715 ORTHO05D004987 3.0e-79 298.9 236 61.0
PSO423G0174 Papaver somniferum HOM05D007715 ORTHO05D009760 3.0e-79 298.9 236 60.6
AUR62025668 Chenopodium quinoa HOM05D007715 ORTHO05D009760 8.8e-79 297.4 222 63.1
SalBow6G7190 Salvia bowleyana HOM05D007715 ORTHO05D009760 8.8e-79 297.4 226 61.1
Medtr4g005360 Medicago truncatula HOM05D007715 ORTHO05D009760 2.0e-78 296.2 221 62.0
Aqoxy7G02738 Aquilegia oxysepala HOM05D007715 ORTHO05D009760 2.6e-78 295.8 236 60.6
EL10Ac7g18154 Beta vulgaris HOM05D007715 ORTHO05D009760 2.6e-78 295.8 222 61.7
Cc04_g00030 Coffea canephora HOM05D007715 ORTHO05D009760 7.4e-78 294.3 239 61.9
QL05p088896 Quercus lobata HOM05D007715 ORTHO05D009760 1.3e-77 293.5 293 52.9
Lj3g0002381 Lotus japonicus HOM05D007715 ORTHO05D009760 4.8e-77 291.6 222 60.8
CiPaw.01G208900 Carya illinoinensis HOM05D007715 ORTHO05D009760 1.1e-76 290.4 231 62.8
Oeu049631.2 Olea europaea HOM05D007715 ORTHO05D009760 1.1e-76 290.4 221 61.5
Oeu049632.1 Olea europaea HOM05D007715 ORTHO05D009760 1.1e-76 290.4 221 61.5
SGA_v2.0_scaffold71G23984 Striga asiatica HOM05D007715 ORTHO05D009760 1.2e-75 287.0 226 61.5
Rhsim08G0250500 Rhododendron simsii HOM05D007715 ORTHO05D009760 2.0e-75 286.2 220 63.6
AUR62001337 Chenopodium quinoa HOM05D007715 ORTHO05D009760 4.5e-75 285.0 222 60.8
Hund18594 Selenicereus undatus HOM05D007715 ORTHO05D009760 2.9e-74 282.3 254 57.1
PGSC0003DMG400009165 Solanum tuberosum HOM05D007715 ORTHO05D009760 3.8e-74 282.0 237 57.8
Psat7g265440 Pisum sativum HOM05D007715 ORTHO05D009760 4.2e-73 278.5 222 57.7
Lalb_Chr01g0011671 Lupinus albus HOM05D007715 ORTHO05D009760 2.7e-72 275.8 225 57.8
Glyma.08G224700 Glycine max HOM05D007715 ORTHO05D009760 4.7e-72 275.0 224 58.9
Duzib192G0685 Durio zibethinus HOM05D007715 ORTHO05D009760 1.8e-71 273.1 152 82.2
HPP92_017384 Vanilla planifolia HOM05D007715 ORTHO05D009760 9.7e-70 267.3 205 61.5
FAN20G1905 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.7e-69 266.5 172 73.8
VMungo0331G1382 Vigna mungo HOM05D007715 ORTHO05D009760 8.2e-69 264.2 233 55.4
ATR0626G044 Amborella trichopoda HOM05D007715 ORTHO05D009760 1.4e-68 263.5 222 57.2
Migut.I01201 Erythranthe guttata HOM05D007715 ORTHO05D009760 5.9e-67 258.1 232 54.7
Zm00001eb102140 Zea mays HOM05D007715 ORTHO05D009760 2.2e-66 256.1 222 52.3
Sp3g18290 Schrenkiella parvula HOM05D007715 ORTHO05D009760 2.9e-66 255.8 235 52.8
SEGI_32597 Sequoiadendron giganteum HOM05D007715 ORTHO05D009760 6.1e-64 248.1 234 52.6
AagrBONN_evm.TU.Sc2ySwM_228.4113 Anthoceros agrestis HOM05D007715 ORTHO05D009760 1.5e-62 243.4 224 51.8
Nitab4.5_0005739g0020 Nicotiana tabacum HOM05D007715 ORTHO05D009760 7.5e-62 241.1 153 73.9
Phvul.010G164200 Phaseolus vulgaris HOM05D007715 ORTHO05D009760 4.8e-61 238.4 233 50.6
Thhalv10020156m.g Eutrema salsugineum HOM05D003198 ORTHO05D009760 1.8e-60 236.5 230 51.3
C05p44060 Brassica napus HOM05D007715 ORTHO05D009760 3.1e-60 235.7 239 49.4
BraA05t21742Z Brassica rapa HOM05D007715 ORTHO05D009760 1.3e-58 230.3 229 49.8
A05p28660 Brassica napus HOM05D007715 ORTHO05D009760 6.5e-58 228.0 229 49.3
Lj9C542G6 Lonicera japonica HOM05D007715 ORTHO05D009760 2.1e-56 223.0 208 54.8
BolC5t33128H Brassica oleracea HOM05D007715 ORTHO05D009760 2.7e-56 222.6 222 49.5
Pp3c3_690 Physcomitrium patens HOM05D007715 ORTHO05D009760 3.6e-56 222.2 221 48.9
Mapoly0008s0087 Marchantia polymorpha HOM05D007715 ORTHO05D009760 8.8e-55 217.6 222 49.1
COL.COLO4_31152 Corchorus olitorius HOM05D007715 ORTHO05D009760 1.4e-52 210.3 111 84.7
MSTRG.22499 Avicennia marina HOM05D007715 ORTHO05D009760 1.2e-48 197.2 171 58.5
Carub.0003s2020 Capsella rubella HOM05D007715 ORTHO05D009760 4.5e-43 178.7 132 60.6
Peaxi162Scf00038g02642 Petunia axillaris HOM05D007715 ORTHO05D009760 2.5e-41 172.9 102 74.5
PSO423G0098 Papaver somniferum HOM05D007715 ORTHO05D009760 3.2e-36 156.0 147 53.7
Dinv20335 Davidia involucrata HOM05D007715 ORTHO05D009760 1.0e-34 151.0 135 57.8
Prupe.3G023100 Prunus persica HOM05D007715 ORTHO05D009760 3.9e-34 149.1 119 62.2
Gohir.A06G117200 Gossypium hirsutum HOM05D007715 ORTHO05D009760 2.1e-32 143.3 136 52.9
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 4.0e-31 139.0 93 69.9
Nitab4.5_0005664g0070 Nicotiana tabacum HOM05D007715 ORTHO05D009760 8.3e-29 131.3 153 45.8
SMO201G0133 Selaginella moellendorffii HOM05D007715 ORTHO05D009760 5.6e-25 118.6 194 36.6
Actinidia21654 Actinidia chinensis HOM05D007715 ORTHO05D009760 1.6e-19 100.5 101 53.5
Psat7g265240 Pisum sativum HOM05D007122 ORTHO05D008918 1.6e-16 90.5 58 67.2
Sopen03g041710 Solanum pennellii HOM05D007715 ORTHO05D009760 9.9e-14 81.3 132 41.7
Os09g0497600 Oryza sativa ssp. japonica HOM05D007715 ORTHO05D009760 6.0e-11 72.0 46 60.9
TPR.G38822 Trifolium pratense HOM05D007715 ORTHO05D009760 1.5e-09 67.4 52 61.5
AL3G33970 Arabidopsis lyrata HOM05D007715 ORTHO05D009760 3.6e-08 62.8 49 57.1
Medtr4g005380 Medicago truncatula HOM05D007715 ORTHO05D009760 8.1e-08 61.6 43 55.8
Solyc03g123970.1 Solanum lycopersicum HOM05D007715 ORTHO05D009760 1.1e-07 61.2 52 67.3
TPR.G38750 Trifolium pratense HOM05D007715 ORTHO05D009760 4.0e-07 59.3 43 53.5


User provided reference genes

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