Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra08G0001500 Salix brachista HOM05D007236 ORTHO05D009150 2.0e-223 778.9 409 100.0
Potri.008G003800 Populus trichocarpa HOM05D007236 ORTHO05D009150 1.9e-186 656.0 412 85.4
Duzib160G0063 Durio zibethinus HOM05D007236 ORTHO05D009150 1.4e-157 560.1 403 74.4
Manes.06G179100 Manihot esculenta HOM05D007236 ORTHO05D009150 3.0e-155 552.4 404 76.2
Thecc.06G055000 Theobroma cacao HOM05D007236 ORTHO05D009150 6.2e-153 544.7 406 71.9
GSVIVG01029561001 Vitis vinifera HOM05D007236 ORTHO05D009150 8.1e-153 544.3 397 72.8
Dinv20327 Davidia involucrata HOM05D007236 ORTHO05D009150 3.8e-142 508.8 397 70.3
Gorai.010G141500 Gossypium raimondii HOM05D007236 ORTHO05D009150 1.1e-141 507.3 414 67.9
Gohir.A06G116300 Gossypium hirsutum HOM05D007236 ORTHO05D009150 1.4e-141 506.9 404 69.1
TWI18G0405 Tripterygium wilfordii HOM05D007236 ORTHO05D009150 6.1e-140 501.5 409 67.7
QL05p088536 Quercus lobata HOM05D007236 ORTHO05D009150 3.9e-139 498.8 397 68.0
Eucgr.J03184 Eucalyptus grandis HOM05D007236 ORTHO05D009150 6.9e-136 488.0 404 65.3
TAR636G0504 Trochodendron aralioides HOM05D007236 ORTHO05D009150 9.0e-136 487.6 393 67.7
Prupe.3G024200 Prunus persica HOM05D007236 ORTHO05D009150 2.0e-135 486.5 406 66.3
Actinidia31123 Actinidia chinensis HOM05D007236 ORTHO05D009150 1.7e-134 483.4 414 63.8
FAN14G0281 Fragaria x ananassa HOM05D007236 ORTHO05D009150 5.0e-134 481.9 415 63.6
AUR62025709 Chenopodium quinoa HOM05D007236 ORTHO05D009150 8.5e-134 481.1 404 64.4
FvH4_6g36830 Fragaria vesca HOM05D007236 ORTHO05D009150 1.1e-133 480.7 415 63.4
Sp5g33940 Schrenkiella parvula HOM05D007236 ORTHO05D009150 1.1e-133 480.7 407 63.4
THA.LOC104812331 Tarenaya hassleriana HOM05D007236 ORTHO05D009150 1.1e-133 480.7 414 64.5
FAN09G1281 Fragaria x ananassa HOM05D007236 ORTHO05D009150 2.1e-132 476.5 415 62.2
Carub.0002s2575 Capsella rubella HOM05D007236 ORTHO05D009150 4.6e-132 475.3 410 63.4
RcHm_v2.0_Chr2g0149221 Rosa chinensis HOM05D007236 ORTHO05D009150 4.6e-132 475.3 414 63.8
VMungo0331G1697 Vigna mungo HOM05D007236 ORTHO05D009150 3.9e-131 472.2 401 63.8
CARHR072510 Cardamine hirsuta HOM05D007236 ORTHO05D009150 6.7e-131 471.5 411 61.8
MD09G1166500 Malus domestica HOM05D007236 ORTHO05D009150 6.7e-131 471.5 409 64.1
Hund05669 Selenicereus undatus HOM05D007236 ORTHO05D009150 1.1e-130 470.7 393 64.6
AL2G39340 Arabidopsis lyrata HOM05D007236 ORTHO05D009150 5.7e-130 468.4 399 62.7
Lj3g0020822 Lotus japonicus HOM05D007236 ORTHO05D009150 2.2e-129 466.5 400 63.8
FAN05G3464 Fragaria x ananassa HOM05D007236 ORTHO05D009150 4.8e-129 465.3 436 59.6
COL.COLO4_31136 Corchorus olitorius HOM05D007236 ORTHO05D009150 1.8e-128 463.4 374 67.6
AT1G78915 Arabidopsis thaliana HOM05D007236 ORTHO05D009150 2.4e-128 463.0 427 58.8
Glyma.08G225400 Glycine max HOM05D007236 ORTHO05D009150 5.3e-128 461.8 403 63.5
BcaB02g07186 Brassica carinata HOM05D007236 ORTHO05D009150 1.2e-127 460.7 408 60.3
Nn5g27081 Nelumbo nucifera HOM05D007236 ORTHO05D009150 3.4e-127 459.1 401 62.6
PGR031G2337 Punica granatum HOM05D007236 ORTHO05D009150 3.4e-127 459.1 394 64.2
Glyma.07G001600 Glycine max HOM05D007236 ORTHO05D009150 7.7e-127 458.0 401 61.8
Aa31LG4G2080 Aethionema arabicum HOM05D007236 ORTHO05D009150 2.2e-126 456.4 408 62.3
Psat7g265040 Pisum sativum HOM05D007236 ORTHO05D009150 2.2e-126 456.4 403 62.5
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 8.5e-126 454.5 410 59.5
MELO3C026715.2 Cucumis melo HOM05D007236 ORTHO05D009150 5.5e-125 451.8 389 62.7
CsaV3_3G030460 Cucumis sativus L. HOM05D007236 ORTHO05D009150 5.5e-125 451.8 389 62.7
BolC6t38197H Brassica oleracea HOM05D007236 ORTHO05D009150 3.0e-123 446.0 421 58.0
arahy.Tifrunner.gnm1.ann1.I3AU87 Arachis hypogaea HOM05D007236 ORTHO05D009150 3.9e-123 445.7 395 63.8
Sopen03g041760 Solanum pennellii HOM05D007236 ORTHO05D009150 5.1e-123 445.3 392 62.8
Solyc03g124030.4 Solanum lycopersicum HOM05D007236 ORTHO05D009150 8.8e-123 444.5 392 62.8
A07p27420 Brassica napus HOM05D007236 ORTHO05D009150 9.7e-122 441.0 427 56.9
Aqoxy5G00022 Aquilegia oxysepala HOM05D007236 ORTHO05D009150 2.2e-121 439.9 391 61.6
Ca_20979_v3 Cicer arietinum L. HOM05D007236 ORTHO05D009150 1.4e-120 437.2 333 67.6
C06p30340 Brassica napus HOM05D007236 ORTHO05D009150 3.1e-120 436.0 432 56.5
arahy.Tifrunner.gnm1.ann1.QM8PPU Arachis hypogaea HOM05D007236 ORTHO05D009150 7.0e-120 434.9 438 58.0
ClCG07G014680 Citrullus lanatus HOM05D007236 ORTHO05D009150 1.2e-119 434.1 366 64.5
ECA234G1409 Erigeron canadensis HOM05D007236 ORTHO05D009150 7.7e-119 431.4 355 63.4
BraA07t30383Z Brassica rapa HOM05D007236 ORTHO05D009150 5.5e-117 425.2 431 55.0
HanXRQChr10g0311241 Helianthus annuus HOM05D007236 ORTHO05D009150 1.6e-116 423.7 387 59.9
Lsat_1_v5_gn_5_137160 Lactuca sativa HOM05D007236 ORTHO05D009150 2.1e-116 423.3 369 62.3
Cc04_g00020 Coffea canephora HOM05D007236 ORTHO05D009150 8.0e-116 421.4 351 63.8
Sed0012172 Sechium edule HOM05D007236 ORTHO05D009150 9.7e-114 414.5 401 56.9
SGA_v2.0_scaffold71G23973 Striga asiatica HOM05D007236 ORTHO05D009150 9.7e-114 414.5 384 59.9
Medtr4g005300 Medicago truncatula HOM05D007236 ORTHO05D009150 1.7e-113 413.7 346 63.9
Oeu039939.2 Olea europaea HOM05D007236 ORTHO05D009150 3.7e-113 412.5 333 66.4
vmacro12583 Vaccinium macrocarpon HOM05D007236 ORTHO05D009150 1.2e-111 407.5 340 63.5
AUR62001326 Chenopodium quinoa HOM05D007236 ORTHO05D009150 8.5e-110 401.4 359 61.0
CDE05G3570 Ceratophyllum demersum HOM05D007236 ORTHO05D008204 6.1e-108 395.2 383 56.1
DCAR_016079 Daucus carota HOM05D007236 ORTHO05D009150 8.0e-108 394.8 406 54.7
TPR.G38815 Trifolium pratense HOM05D007236 ORTHO05D009150 1.4e-107 394.0 344 62.5
Gohir.D06G121200 Gossypium hirsutum HOM05D007236 ORTHO05D009150 3.0e-107 392.9 404 57.2
Zm00001eb305180 Zea mays HOM05D007236 ORTHO05D009150 2.8e-105 386.3 380 52.4
unitig_32.g11550 Utricularia gibba HOM05D007236 ORTHO05D009150 1.0e-102 377.9 401 51.6
Thhalv10018805m.g Eutrema salsugineum HOM05D007236 ORTHO05D009150 2.9e-102 376.3 408 54.4
ATR0215G005 Amborella trichopoda HOM05D007236 ORTHO05D009150 8.5e-102 374.8 378 57.1
Sc12g0011240 Simmondsia chinensis HOM05D000518 ORTHO05D000737 1.2e-100 370.9 279 69.2
Rhsim02G0000100 Rhododendron simsii HOM05D007236 ORTHO05D009150 2.6e-98 363.2 474 47.3
Migut.I01208 Erythranthe guttata HOM05D007236 ORTHO05D009150 6.3e-97 358.6 315 62.5
CiPaw.01G207800 Carya illinoinensis HOM05D007236 ORTHO05D009150 7.2e-93 345.1 332 61.4
Sc12g0011350 Simmondsia chinensis HOM05D007236 ORTHO05D009150 7.0e-88 328.6 245 70.2
SEGI_39602 Sequoiadendron giganteum HOM05D007236 ORTHO05D009150 2.7e-87 326.6 385 49.1
Peaxi162Scf00038g02668 Petunia axillaris HOM05D007236 ORTHO05D009150 1.0e-86 324.7 319 56.1
MSTRG.22498 Avicennia marina HOM05D007236 ORTHO05D009150 1.3e-86 324.3 389 50.1
PSO170G4015 Papaver somniferum HOM05D007236 ORTHO05D009150 3.3e-85 319.7 389 49.9
PSO357G0009 Papaver somniferum HOM05D007236 ORTHO05D009150 9.5e-85 318.2 382 49.0
Lalb_Chr01g0011631 Lupinus albus HOM05D007236 ORTHO05D009150 2.3e-78 297.0 224 68.8
CAN.G790.6 Capsicum annuum HOM05D007236 ORTHO05D009150 1.6e-76 290.8 206 71.8
Ciclev10013942m.g Citrus clementina HOM05D007236 ORTHO05D009150 2.3e-75 287.0 190 76.8
Haze_16198 Corylus avellana HOM05D007236 ORTHO05D009150 7.5e-74 282.0 280 57.1
SMO117G0135 Selaginella moellendorffii HOM05D007236 ORTHO05D009150 8.6e-70 268.5 332 45.2
Pp3c5_19050 Physcomitrium patens HOM05D007236 ORTHO05D009150 3.7e-65 253.1 410 40.7
FAN02G2413 Fragaria x ananassa HOM05D007236 ORTHO05D009150 6.4e-65 252.3 306 48.7
Lj9A543T71 Lonicera japonica HOM05D007236 ORTHO05D009150 4.1e-64 249.6 190 68.4
EL10Ac7g18131 Beta vulgaris HOM05D007236 ORTHO05D009150 7.3e-61 238.8 252 57.5
AagrBONN_evm.TU.Sc2ySwM_117.3884 Anthoceros agrestis HOM05D007236 ORTHO05D009150 1.2e-58 231.5 418 37.3
Mapoly0075s0045 Marchantia polymorpha HOM05D007236 ORTHO05D009150 9.9e-58 228.4 396 38.6
Cpa.g.sc176.15 Carica papaya HOM05D007236 ORTHO05D009150 6.2e-52 209.1 212 56.1
Atru.chr1.2627 Acer truncatum HOM05D007236 ORTHO05D009150 1.3e-49 201.4 144 73.6
Ciclev10013945m.g Citrus clementina HOM05D007236 ORTHO05D009150 5.4e-40 169.5 120 73.3
Atru.chr1.2630 Acer truncatum HOM05D007236 ORTHO05D009150 1.8e-38 164.5 127 69.3
Nitab4.5_0000499g0120 Nicotiana tabacum HOM05D007236 ORTHO05D009150 2.3e-38 164.1 113 72.6
Lj9A543T70 Lonicera japonica HOM05D007236 ORTHO05D009150 1.0e-33 148.7 99 74.7
CANSAT01G0299 Cannabis sativa HOM05D007236 ORTHO05D009150 2.1e-31 141.0 107 69.2
PRCOL_00005889 Prasinoderma coloniale HOM05D007236 ORTHO05D009150 4.3e-29 133.3 351 31.9
CSS0013667 Camellia sinensis var. sinensis HOM05D007236 ORTHO05D009150 2.6e-26 124.0 85 75.3
Os07g0287100 Oryza sativa ssp. japonica HOM05D007236 ORTHO05D009150 9.3e-24 115.5 165 40.6
CSS0007704 Camellia sinensis var. sinensis HOM05D007236 ORTHO05D009150 1.0e-22 112.1 87 60.9
Cre12.g554103 Chlamydomonas reinhardtii HOM05D007236 ORTHO05D009150 1.5e-18 98.2 352 27.0
Haze_16199 Corylus avellana HOM05D007236 ORTHO05D009150 5.9e-18 96.3 127 47.2
MCO09G516 Micromonas commoda HOM05D007236 ORTHO05D009150 3.9e-14 83.6 368 25.0
Aa31sc24G50 Aethionema arabicum HOM05D002308 ORTHO05D002535 2.2e-09 67.8 112 41.1
Nitab4.5_0000499g0130 Nicotiana tabacum HOM05D007236 ORTHO05D009150 5.0e-09 66.6 55 60.0
HPP92_021784 Vanilla planifolia HOM05D001509 ORTHO05D001361 5.1e-06 56.6 247 23.5


User provided reference genes

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